RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 HADHBP55084 474 aaKnown RBP17.65■□□□□ 0.42
COL7A1-202ENST00000422991 ARHGAP29Q52LW3 1261 aa17.65■□□□□ 0.42
COL7A1-202ENST00000422991 BRMS1LQ5PSV4 323 aa17.65■□□□□ 0.42
COL7A1-202ENST00000422991 CC2D1AQ6P1N0 951 aaPredicted RBP17.65■□□□□ 0.42
COL7A1-202ENST00000422991 DENND1CQ8IV53 801 aa17.65■□□□□ 0.42
COL7A1-202ENST00000422991 YAF2Q8IY57 180 aa17.65■□□□□ 0.42
COL7A1-202ENST00000422991 OSCP1Q8WVF1 389 aa17.65■□□□□ 0.42
COL7A1-202ENST00000422991 ATRIPQ8WXE1 791 aa17.65■□□□□ 0.42
COL7A1-202ENST00000422991 RNF34Q969K3 372 aa17.65■□□□□ 0.42
COL7A1-202ENST00000422991 TRMT61BQ9BVS5 477 aaKnown RBP17.65■□□□□ 0.42
COL7A1-202ENST00000422991 THG1LQ9NWX6 298 aaKnown RBP17.65■□□□□ 0.42
COL7A1-202ENST00000422991 ARHGEF38Q9NXL2 777 aa17.65■□□□□ 0.42
COL7A1-202ENST00000422991 LCMT1Q9UIC8 334 aa17.65■□□□□ 0.42
COL7A1-202ENST00000422991 AGO1Q9UL18 857 aaKnown RBP17.65■□□□□ 0.42
COL7A1-202ENST00000422991 ZNF510Q9Y2H8 683 aa17.65■□□□□ 0.42
COL7A1-202ENST00000422991 PAXBP1Q9Y5B6 917 aa17.65■□□□□ 0.42
COL7A1-202ENST00000422991 SLC9A3R1O14745 358 aaPredicted RBP17.64■□□□□ 0.41
COL7A1-202ENST00000422991 CHADO15335 359 aa17.64■□□□□ 0.41
COL7A1-202ENST00000422991 DCXO43602 365 aa17.64■□□□□ 0.41
COL7A1-202ENST00000422991 PROSCO94903 275 aa17.64■□□□□ 0.41
COL7A1-202ENST00000422991 MOCS2O96007 188 aaPredicted RBP17.64■□□□□ 0.41
COL7A1-202ENST00000422991 CCDC175P0C221 793 aa17.64■□□□□ 0.41
COL7A1-202ENST00000422991 GDI1P31150 447 aa17.64■□□□□ 0.41
COL7A1-202ENST00000422991 IFNAR2P48551 515 aa17.64■□□□□ 0.41
COL7A1-202ENST00000422991 TDGQ13569 410 aa17.64■□□□□ 0.41
COL7A1-202ENST00000422991 PIGHQ14442 188 aaPredicted RBP17.64■□□□□ 0.41
COL7A1-202ENST00000422991 ACAP1Q15027 740 aa17.64■□□□□ 0.41
COL7A1-202ENST00000422991 PDGFRLQ15198 375 aa17.64■□□□□ 0.41
COL7A1-202ENST00000422991 EML3Q32P44 896 aa17.64■□□□□ 0.41
COL7A1-202ENST00000422991 FAM131BQ86XD5 332 aa17.64■□□□□ 0.41
COL7A1-202ENST00000422991 RNF135Q8IUD6 432 aa17.64■□□□□ 0.41
COL7A1-202ENST00000422991 FAM217AQ8IXS0 508 aa17.64■□□□□ 0.41
COL7A1-202ENST00000422991 ARFGAP1Q8N6T3 406 aa17.64■□□□□ 0.41
COL7A1-202ENST00000422991 AZIN2Q96A70 460 aa17.64■□□□□ 0.41
COL7A1-202ENST00000422991 OTUB2Q96DC9 234 aa17.64■□□□□ 0.41
COL7A1-202ENST00000422991 ZFYVE19Q96K21 471 aa17.64■□□□□ 0.41
COL7A1-202ENST00000422991 BTN2A3PQ96KV6 586 aa17.64■□□□□ 0.41
COL7A1-202ENST00000422991 FAM83CQ9BQN1 747 aa17.64■□□□□ 0.41
COL7A1-202ENST00000422991 DUS2Q9NX74 493 aaKnown RBP17.64■□□□□ 0.41
COL7A1-202ENST00000422991 TBC1D14Q9P2M4 693 aa17.64■□□□□ 0.41
COL7A1-202ENST00000422991 SALL4Q9UJQ4 1053 aa17.64■□□□□ 0.41
COL7A1-202ENST00000422991 STOML2Q9UJZ1 356 aa17.64■□□□□ 0.41
COL7A1-202ENST00000422991 TRIOO75962 3097 aa17.64■□□□□ 0.41
COL7A1-202ENST00000422991 I6L893 689 aaPredicted RBP17.63■□□□□ 0.41
COL7A1-202ENST00000422991 ARNTLO00327 626 aa17.63■□□□□ 0.41
COL7A1-202ENST00000422991 ACSL4O60488 711 aa17.63■□□□□ 0.41
COL7A1-202ENST00000422991 LRCH4O75427 683 aa17.63■□□□□ 0.41
COL7A1-202ENST00000422991 RNF8O76064 485 aa17.63■□□□□ 0.41
COL7A1-202ENST00000422991 SLC11A2P49281 568 aa17.63■□□□□ 0.41
COL7A1-202ENST00000422991 KIF5AQ12840 1032 aa17.63■□□□□ 0.41
COL7A1-202ENST00000422991 MTA1Q13330 715 aa17.63■□□□□ 0.41
COL7A1-202ENST00000422991 TRIM68Q6AZZ1 485 aa17.63■□□□□ 0.41
COL7A1-202ENST00000422991 NADSYN1Q6IA69 706 aa17.63■□□□□ 0.41
COL7A1-202ENST00000422991 ATP6V0D2Q8N8Y2 350 aa17.63■□□□□ 0.41
COL7A1-202ENST00000422991 TKTL2Q9H0I9 626 aa17.63■□□□□ 0.41
COL7A1-202ENST00000422991 LINC00597Q9H2U6 94 aa17.63■□□□□ 0.41
COL7A1-202ENST00000422991 WDCPQ9H6R7 721 aa17.63■□□□□ 0.41
COL7A1-202ENST00000422991 BRD9Q9H8M2 597 aa17.63■□□□□ 0.41
COL7A1-202ENST00000422991 ANLNQ9NQW6 1124 aa17.63■□□□□ 0.41
COL7A1-202ENST00000422991 TRIM10Q9UDY6 481 aa17.63■□□□□ 0.41
COL7A1-202ENST00000422991 XPO7Q9UIA9 1087 aaKnown RBP17.63■□□□□ 0.41
COL7A1-202ENST00000422991 SORCS3Q9UPU3 1222 aa17.63■□□□□ 0.41
COL7A1-202ENST00000422991 PPP2R2CQ9Y2T4 447 aa17.63■□□□□ 0.41
COL7A1-202ENST00000422991 DUSP10Q9Y6W6 482 aa17.63■□□□□ 0.41
COL7A1-202ENST00000422991 SRFP11831 508 aa17.62■□□□□ 0.41
COL7A1-202ENST00000422991 ARSAP15289 507 aa17.62■□□□□ 0.41
COL7A1-202ENST00000422991 MAN1A1P33908 653 aa17.62■□□□□ 0.41
COL7A1-202ENST00000422991 PCK1P35558 622 aa17.62■□□□□ 0.41
COL7A1-202ENST00000422991 ARHGAP25P42331 645 aa17.62■□□□□ 0.41
COL7A1-202ENST00000422991 NOP2P46087 812 aaKnown RBP17.62■□□□□ 0.41
COL7A1-202ENST00000422991 FAM133BQ5BKY9 247 aaKnown RBP17.62■□□□□ 0.41
COL7A1-202ENST00000422991 PIK3R6Q5UE93 754 aa17.62■□□□□ 0.41
COL7A1-202ENST00000422991 DAB2IPQ5VWQ8 1189 aa17.62■□□□□ 0.41
COL7A1-202ENST00000422991 CPXM2Q8N436 756 aa17.62■□□□□ 0.41
COL7A1-202ENST00000422991 CCDC185Q8N715 623 aa17.62■□□□□ 0.41
COL7A1-202ENST00000422991 ATP2A3Q93084 1043 aa17.62■□□□□ 0.41
COL7A1-202ENST00000422991 NTAN1Q96AB6 310 aa17.62■□□□□ 0.41
COL7A1-202ENST00000422991 NCAPGQ9BPX3 1015 aa17.62■□□□□ 0.41
COL7A1-202ENST00000422991 TSGA10Q9BZW7 698 aa17.62■□□□□ 0.41
COL7A1-202ENST00000422991 HPS4Q9NQG7 708 aa17.62■□□□□ 0.41
COL7A1-202ENST00000422991 TMPRSS4Q9NRS4 437 aa17.62■□□□□ 0.41
COL7A1-202ENST00000422991 SLC12A6Q9UHW9 1150 aa17.62■□□□□ 0.41
COL7A1-202ENST00000422991 DUSP12Q9UNI6 340 aa17.62■□□□□ 0.41
COL7A1-202ENST00000422991 KIAA1549LQ6ZVL6 1849 aa17.61■□□□□ 0.41
COL7A1-202ENST00000422991 GFRA2O00451 464 aa17.61■□□□□ 0.41
COL7A1-202ENST00000422991 NARSO43776 548 aaKnown RBP17.61■□□□□ 0.41
COL7A1-202ENST00000422991 GPR37L1O60883 481 aa17.61■□□□□ 0.41
COL7A1-202ENST00000422991 PAGE1O75459 146 aa17.61■□□□□ 0.41
COL7A1-202ENST00000422991 MIPP30301 263 aa17.61■□□□□ 0.41
COL7A1-202ENST00000422991 TNK2Q07912 1038 aa17.61■□□□□ 0.41
COL7A1-202ENST00000422991 SCAPQ12770 1279 aa17.61■□□□□ 0.41
COL7A1-202ENST00000422991 MESDQ14696 234 aa17.61■□□□□ 0.41
COL7A1-202ENST00000422991 TMEM31Q5JXX7 168 aa17.61■□□□□ 0.41
COL7A1-202ENST00000422991 ADGRF1Q5T601 910 aa17.61■□□□□ 0.41
COL7A1-202ENST00000422991 SCYL2Q6P3W7 929 aa17.61■□□□□ 0.41
COL7A1-202ENST00000422991 ZNF662Q6ZS27 426 aa17.61■□□□□ 0.41
COL7A1-202ENST00000422991 CYP4V2Q6ZWL3 525 aaPredicted RBP17.61■□□□□ 0.41
COL7A1-202ENST00000422991 CPNE8Q86YQ8 564 aa17.61■□□□□ 0.41
COL7A1-202ENST00000422991 TPCN2Q8NHX9 752 aa17.61■□□□□ 0.41
COL7A1-202ENST00000422991 IRF7Q92985 503 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms