RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 NCAPGQ9BPX3 1015 aa18.21■□□□□ 0.51
LINC00271-201ENST00000421378 TRMT61BQ9BVS5 477 aaKnown RBP18.21■□□□□ 0.51
LINC00271-201ENST00000421378 TKTL2Q9H0I9 626 aa18.21■□□□□ 0.51
LINC00271-201ENST00000421378 TBC1D14Q9P2M4 693 aa18.21■□□□□ 0.51
LINC00271-201ENST00000421378 TRIM10Q9UDY6 481 aa18.21■□□□□ 0.51
LINC00271-201ENST00000421378 SLC12A6Q9UHW9 1150 aa18.21■□□□□ 0.51
LINC00271-201ENST00000421378 AGO1Q9UL18 857 aaKnown RBP18.21■□□□□ 0.51
LINC00271-201ENST00000421378 ZNF510Q9Y2H8 683 aa18.21■□□□□ 0.51
LINC00271-201ENST00000421378 TCF20Q9UGU0 1960 aaKnown RBP18.21■□□□□ 0.51
LINC00271-201ENST00000421378 C19orf67A6NJJ6 358 aa18.21■□□□□ 0.51
LINC00271-201ENST00000421378 KCNU1A8MYU2 1149 aa18.21■□□□□ 0.51
LINC00271-201ENST00000421378 SLC9A3R1O14745 358 aaPredicted RBP18.21■□□□□ 0.51
LINC00271-201ENST00000421378 PROSCO94903 275 aa18.21■□□□□ 0.51
LINC00271-201ENST00000421378 SLC11A2P49281 568 aa18.21■□□□□ 0.51
LINC00271-201ENST00000421378 MTA1Q13330 715 aa18.21■□□□□ 0.51
LINC00271-201ENST00000421378 TJAP1Q5JTD0 557 aa18.21■□□□□ 0.51
LINC00271-201ENST00000421378 DAB2IPQ5VWQ8 1189 aa18.21■□□□□ 0.51
LINC00271-201ENST00000421378 SCYL2Q6P3W7 929 aa18.21■□□□□ 0.51
LINC00271-201ENST00000421378 BBS7Q8IWZ6 715 aa18.21■□□□□ 0.51
LINC00271-201ENST00000421378 OSCP1Q8WVF1 389 aa18.21■□□□□ 0.51
LINC00271-201ENST00000421378 ARHGEF38Q9NXL2 777 aa18.21■□□□□ 0.51
LINC00271-201ENST00000421378 WNT6Q9Y6F9 365 aa18.21■□□□□ 0.51
LINC00271-201ENST00000421378 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.21■□□□□ 0.51
LINC00271-201ENST00000421378 KIF26AQ9ULI4 1882 aaPredicted RBP18.2■□□□□ 0.5
LINC00271-201ENST00000421378 TMEM110-MUSTN1A8MSY1 372 aa18.2■□□□□ 0.5
LINC00271-201ENST00000421378 LATS1O95835 1130 aa18.2■□□□□ 0.5
LINC00271-201ENST00000421378 MAN1A1P33908 653 aa18.2■□□□□ 0.5
LINC00271-201ENST00000421378 PCK1P35558 622 aa18.2■□□□□ 0.5
LINC00271-201ENST00000421378 IFI16Q16666 785 aaKnown RBP18.2■□□□□ 0.5
LINC00271-201ENST00000421378 ARL13BQ3SXY8 428 aa18.2■□□□□ 0.5
LINC00271-201ENST00000421378 ARHGAP29Q52LW3 1261 aa18.2■□□□□ 0.5
LINC00271-201ENST00000421378 ZNF662Q6ZS27 426 aa18.2■□□□□ 0.5
LINC00271-201ENST00000421378 ARFGAP1Q8N6T3 406 aa18.2■□□□□ 0.5
LINC00271-201ENST00000421378 ATP6V0D2Q8N8Y2 350 aa18.2■□□□□ 0.5
LINC00271-201ENST00000421378 OTUB2Q96DC9 234 aa18.2■□□□□ 0.5
LINC00271-201ENST00000421378 ZFYVE19Q96K21 471 aa18.2■□□□□ 0.5
LINC00271-201ENST00000421378 LZTFL1Q9NQ48 299 aa18.2■□□□□ 0.5
LINC00271-201ENST00000421378 DUS2Q9NX74 493 aaKnown RBP18.2■□□□□ 0.5
LINC00271-201ENST00000421378 PRPSAP2O60256 369 aa18.19■□□□□ 0.5
LINC00271-201ENST00000421378 BUB1BO60566 1050 aaPredicted RBP18.19■□□□□ 0.5
LINC00271-201ENST00000421378 MIPP30301 263 aa18.19■□□□□ 0.5
LINC00271-201ENST00000421378 GDI1P31150 447 aa18.19■□□□□ 0.5
LINC00271-201ENST00000421378 IFNAR2P48551 515 aa18.19■□□□□ 0.5
LINC00271-201ENST00000421378 SLC44A3Q8N4M1 653 aa18.19■□□□□ 0.5
LINC00271-201ENST00000421378 CCDC185Q8N715 623 aa18.19■□□□□ 0.5
LINC00271-201ENST00000421378 TPCN2Q8NHX9 752 aa18.19■□□□□ 0.5
LINC00271-201ENST00000421378 AZIN2Q96A70 460 aa18.19■□□□□ 0.5
LINC00271-201ENST00000421378 NTAN1Q96AB6 310 aa18.19■□□□□ 0.5
LINC00271-201ENST00000421378 ASIC4Q96FT7 647 aa18.19■□□□□ 0.5
LINC00271-201ENST00000421378 XPO7Q9UIA9 1087 aaKnown RBP18.19■□□□□ 0.5
LINC00271-201ENST00000421378 STOML2Q9UJZ1 356 aa18.19■□□□□ 0.5
LINC00271-201ENST00000421378 USP18Q9UMW8 372 aa18.19■□□□□ 0.5
LINC00271-201ENST00000421378 GUCA1BQ9UMX6 200 aa18.19■□□□□ 0.5
LINC00271-201ENST00000421378 CHADO15335 359 aa18.18■□□□□ 0.5
LINC00271-201ENST00000421378 ZSCAN12O43309 604 aa18.18■□□□□ 0.5
LINC00271-201ENST00000421378 ACSL4O60488 711 aa18.18■□□□□ 0.5
LINC00271-201ENST00000421378 PAGE1O75459 146 aa18.18■□□□□ 0.5
LINC00271-201ENST00000421378 CHKAP35790 457 aa18.18■□□□□ 0.5
LINC00271-201ENST00000421378 AIF1P55008 147 aa18.18■□□□□ 0.5
LINC00271-201ENST00000421378 ADGRF1Q5T601 910 aa18.18■□□□□ 0.5
LINC00271-201ENST00000421378 TRIM68Q6AZZ1 485 aa18.18■□□□□ 0.5
LINC00271-201ENST00000421378 C11orf63Q6NUN7 778 aa18.18■□□□□ 0.5
LINC00271-201ENST00000421378 SLFN11Q7Z7L1 901 aa18.18■□□□□ 0.5
LINC00271-201ENST00000421378 DAAM2Q86T65 1068 aa18.18■□□□□ 0.5
LINC00271-201ENST00000421378 RNF10Q8N5U6 811 aaKnown RBP18.18■□□□□ 0.5
LINC00271-201ENST00000421378 ATP2A3Q93084 1043 aa18.18■□□□□ 0.5
LINC00271-201ENST00000421378 FAM83CQ9BQN1 747 aa18.18■□□□□ 0.5
LINC00271-201ENST00000421378 BRD9Q9H8M2 597 aa18.18■□□□□ 0.5
LINC00271-201ENST00000421378 ANLNQ9NQW6 1124 aa18.18■□□□□ 0.5
LINC00271-201ENST00000421378 PCSK1NQ9UHG2 260 aa18.18■□□□□ 0.5
LINC00271-201ENST00000421378 PYCARDQ9ULZ3 195 aa18.18■□□□□ 0.5
LINC00271-201ENST00000421378 I6L893 689 aaPredicted RBP18.17■□□□□ 0.5
LINC00271-201ENST00000421378 ADRA1BP35368 520 aa18.17■□□□□ 0.5
LINC00271-201ENST00000421378 SLC1A1P43005 524 aa18.17■□□□□ 0.5
LINC00271-201ENST00000421378 SSR1P43307 286 aaKnown RBP18.17■□□□□ 0.5
LINC00271-201ENST00000421378 SCAPQ12770 1279 aa18.17■□□□□ 0.5
LINC00271-201ENST00000421378 TDGQ13569 410 aa18.17■□□□□ 0.5
LINC00271-201ENST00000421378 PDGFRLQ15198 375 aa18.17■□□□□ 0.5
LINC00271-201ENST00000421378 EML3Q32P44 896 aa18.17■□□□□ 0.5
LINC00271-201ENST00000421378 GJD3Q8N144 294 aa18.17■□□□□ 0.5
LINC00271-201ENST00000421378 HAPLN3Q96S86 360 aa18.17■□□□□ 0.5
LINC00271-201ENST00000421378 DDX50Q9BQ39 737 aaKnown RBP18.17■□□□□ 0.5
LINC00271-201ENST00000421378 LINC00597Q9H2U6 94 aa18.17■□□□□ 0.5
LINC00271-201ENST00000421378 EBF3Q9H4W6 596 aa18.17■□□□□ 0.5
LINC00271-201ENST00000421378 TMPRSS4Q9NRS4 437 aa18.17■□□□□ 0.5
LINC00271-201ENST00000421378 MOCS3O95396 460 aa18.17■□□□□ 0.5
LINC00271-201ENST00000421378 TCF4P15884 667 aa18.17■□□□□ 0.5
LINC00271-201ENST00000421378 SLC25A11Q02978 314 aaKnown RBP18.17■□□□□ 0.5
LINC00271-201ENST00000421378 HADHQ16836 314 aaKnown RBP18.17■□□□□ 0.5
LINC00271-201ENST00000421378 FAM133BQ5BKY9 247 aaKnown RBP18.17■□□□□ 0.5
LINC00271-201ENST00000421378 MS4A13Q5J8X5 152 aa18.17■□□□□ 0.5
LINC00271-201ENST00000421378 EFHC2Q5JST6 749 aa18.17■□□□□ 0.5
LINC00271-201ENST00000421378 ACBD5Q5T8D3 534 aaPredicted RBP18.17■□□□□ 0.5
LINC00271-201ENST00000421378 PIK3R6Q5UE93 754 aa18.17■□□□□ 0.5
LINC00271-201ENST00000421378 NADSYN1Q6IA69 706 aa18.17■□□□□ 0.5
LINC00271-201ENST00000421378 FAM217AQ8IXS0 508 aa18.17■□□□□ 0.5
LINC00271-201ENST00000421378 CPXM2Q8N436 756 aa18.17■□□□□ 0.5
LINC00271-201ENST00000421378 IRF7Q92985 503 aa18.17■□□□□ 0.5
LINC00271-201ENST00000421378 TRIM44Q96DX7 344 aaPredicted RBP18.17■□□□□ 0.5
LINC00271-201ENST00000421378 PEBP4Q96S96 227 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms