RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 NAGPAQ9UK23 515 aa10.71□□□□□ -0.69
TNFAIP3-202ENST00000420009 CLEC4EQ9ULY5 219 aa10.71□□□□□ -0.69
TNFAIP3-202ENST00000420009 ANKRD6Q9Y2G4 727 aa10.71□□□□□ -0.69
TNFAIP3-202ENST00000420009 USP3Q9Y6I4 520 aa10.71□□□□□ -0.69
TNFAIP3-202ENST00000420009 COL5A1P20908 1838 aaPredicted RBP10.7□□□□□ -0.7
TNFAIP3-202ENST00000420009 H0Y8X5 98 aa10.7□□□□□ -0.7
TNFAIP3-202ENST00000420009 TK2O00142 265 aa10.7□□□□□ -0.7
TNFAIP3-202ENST00000420009 ATXN7O15265 892 aaPredicted RBP10.7□□□□□ -0.7
TNFAIP3-202ENST00000420009 CLSTN1O94985 981 aa10.7□□□□□ -0.7
TNFAIP3-202ENST00000420009 ASS1P00966 412 aaKnown RBP10.7□□□□□ -0.7
TNFAIP3-202ENST00000420009 PRB1P04280 392 aa10.7□□□□□ -0.7
TNFAIP3-202ENST00000420009 EPHX1P07099 455 aa10.7□□□□□ -0.7
TNFAIP3-202ENST00000420009 CTSKP43235 329 aa10.7□□□□□ -0.7
TNFAIP3-202ENST00000420009 COG7P83436 770 aa10.7□□□□□ -0.7
TNFAIP3-202ENST00000420009 AMPD3Q01432 767 aa10.7□□□□□ -0.7
TNFAIP3-202ENST00000420009 C19orf57Q0VDD7 668 aa10.7□□□□□ -0.7
TNFAIP3-202ENST00000420009 TEAD4Q15561 434 aa10.7□□□□□ -0.7
TNFAIP3-202ENST00000420009 SGSM1Q2NKQ1 1148 aa10.7□□□□□ -0.7
TNFAIP3-202ENST00000420009 LAYNQ6UX15 382 aa10.7□□□□□ -0.7
TNFAIP3-202ENST00000420009 TMPRSS12Q86WS5 348 aa10.7□□□□□ -0.7
TNFAIP3-202ENST00000420009 CPXM2Q8N436 756 aa10.7□□□□□ -0.7
TNFAIP3-202ENST00000420009 TMEM174Q8WUU8 243 aa10.7□□□□□ -0.7
TNFAIP3-202ENST00000420009 SNX19Q92543 992 aa10.7□□□□□ -0.7
TNFAIP3-202ENST00000420009 TAF4BQ92750 862 aa10.7□□□□□ -0.7
TNFAIP3-202ENST00000420009 DHX58Q96C10 678 aa10.7□□□□□ -0.7
TNFAIP3-202ENST00000420009 CDK5RAP1Q96SZ6 601 aaKnown RBP10.7□□□□□ -0.7
TNFAIP3-202ENST00000420009 ORAI3Q9BRQ5 295 aa10.7□□□□□ -0.7
TNFAIP3-202ENST00000420009 MFRPQ9BY79 579 aa10.7□□□□□ -0.7
TNFAIP3-202ENST00000420009 SLC2A11Q9BYW1 496 aa10.7□□□□□ -0.7
TNFAIP3-202ENST00000420009 DCLK3Q9C098 648 aa10.7□□□□□ -0.7
TNFAIP3-202ENST00000420009 CIPCQ9C0C6 399 aa10.7□□□□□ -0.7
TNFAIP3-202ENST00000420009 LHX5Q9H2C1 402 aa10.7□□□□□ -0.7
TNFAIP3-202ENST00000420009 TMEM245Q9H330 911 aa10.7□□□□□ -0.7
TNFAIP3-202ENST00000420009 DMAC2Q9NW81 257 aa10.7□□□□□ -0.7
TNFAIP3-202ENST00000420009 TFIP11Q9UBB9 837 aaKnown RBP10.7□□□□□ -0.7
TNFAIP3-202ENST00000420009 AGO1Q9UL18 857 aaKnown RBP10.7□□□□□ -0.7
TNFAIP3-202ENST00000420009 ASXL3Q9C0F0 2248 aa10.7□□□□□ -0.7
TNFAIP3-202ENST00000420009 CABIN1Q9Y6J0 2220 aa10.69□□□□□ -0.7
TNFAIP3-202ENST00000420009 PLK4O00444 970 aa10.69□□□□□ -0.7
TNFAIP3-202ENST00000420009 TIMM44O43615 452 aa10.69□□□□□ -0.7
TNFAIP3-202ENST00000420009 STX6O43752 255 aa10.69□□□□□ -0.7
TNFAIP3-202ENST00000420009 TSPAN3O60637 253 aa10.69□□□□□ -0.7
TNFAIP3-202ENST00000420009 SEMA4FO95754 770 aa10.69□□□□□ -0.7
TNFAIP3-202ENST00000420009 CYBBP04839 570 aa10.69□□□□□ -0.7
TNFAIP3-202ENST00000420009 RPN1P04843 607 aaKnown RBP10.69□□□□□ -0.7
TNFAIP3-202ENST00000420009 RALAP11233 206 aa10.69□□□□□ -0.7
TNFAIP3-202ENST00000420009 HLA-EP13747 358 aa10.69□□□□□ -0.7
TNFAIP3-202ENST00000420009 SYT1P21579 422 aa10.69□□□□□ -0.7
TNFAIP3-202ENST00000420009 CD27P26842 260 aa10.69□□□□□ -0.7
TNFAIP3-202ENST00000420009 ITPKBP27987 946 aa10.69□□□□□ -0.7
TNFAIP3-202ENST00000420009 DLG4P78352 724 aa10.69□□□□□ -0.7
TNFAIP3-202ENST00000420009 KNOP1Q1ED39 458 aaKnown RBP10.69□□□□□ -0.7
TNFAIP3-202ENST00000420009 INAVAQ3KP66 663 aa10.69□□□□□ -0.7
TNFAIP3-202ENST00000420009 KCNT1Q5JUK3 1230 aa10.69□□□□□ -0.7
TNFAIP3-202ENST00000420009 SPOPLQ6IQ16 392 aa10.69□□□□□ -0.7
TNFAIP3-202ENST00000420009 SV2AQ7L0J3 742 aa10.69□□□□□ -0.7
TNFAIP3-202ENST00000420009 SLC9A9Q8IVB4 645 aa10.69□□□□□ -0.7
TNFAIP3-202ENST00000420009 LINC00301Q8NCQ3 95 aa10.69□□□□□ -0.7
TNFAIP3-202ENST00000420009 ENGASEQ8NFI3 743 aa10.69□□□□□ -0.7
TNFAIP3-202ENST00000420009 GOLGA5Q8TBA6 731 aa10.69□□□□□ -0.7
TNFAIP3-202ENST00000420009 PIP4K2CQ8TBX8 421 aa10.69□□□□□ -0.7
TNFAIP3-202ENST00000420009 BIRC7Q96CA5 298 aa10.69□□□□□ -0.7
TNFAIP3-202ENST00000420009 NXPE2Q96DL1 559 aa10.69□□□□□ -0.7
TNFAIP3-202ENST00000420009 CYFIP2Q96F07 1278 aa10.69□□□□□ -0.7
TNFAIP3-202ENST00000420009 BACH2Q9BYV9 841 aa10.69□□□□□ -0.7
TNFAIP3-202ENST00000420009 PRORYQ9H606 182 aa10.69□□□□□ -0.7
TNFAIP3-202ENST00000420009 FBRSQ9HAH7 460 aa10.69□□□□□ -0.7
TNFAIP3-202ENST00000420009 MAGEF1Q9HAY2 307 aa10.69□□□□□ -0.7
TNFAIP3-202ENST00000420009 FTSJ1Q9UET6 329 aa10.69□□□□□ -0.7
TNFAIP3-202ENST00000420009 RASAL2Q9UJF2 1139 aa10.69□□□□□ -0.7
TNFAIP3-202ENST00000420009 PCDHGA4Q9Y5G9 962 aa10.69□□□□□ -0.7
TNFAIP3-202ENST00000420009 PCDHGA1Q9Y5H4 931 aa10.69□□□□□ -0.7
TNFAIP3-202ENST00000420009 TMEM131Q92545 1883 aa10.69□□□□□ -0.7
TNFAIP3-202ENST00000420009 NUMA1Q14980 2115 aa10.69□□□□□ -0.7
TNFAIP3-202ENST00000420009 KNL1Q8NG31 2342 aa10.68□□□□□ -0.7
TNFAIP3-202ENST00000420009 GOLGA4Q13439 2230 aaKnown RBP10.68□□□□□ -0.7
TNFAIP3-202ENST00000420009 KCNK3O14649 394 aa10.68□□□□□ -0.7
TNFAIP3-202ENST00000420009 HMBSP08397 361 aa10.68□□□□□ -0.7
TNFAIP3-202ENST00000420009 TRIM21P19474 475 aaKnown RBP10.68□□□□□ -0.7
TNFAIP3-202ENST00000420009 HOXD9P28356 352 aaPredicted RBP10.68□□□□□ -0.7
TNFAIP3-202ENST00000420009 CASP1P29466 404 aa10.68□□□□□ -0.7
TNFAIP3-202ENST00000420009 HLA-FP30511 346 aa10.68□□□□□ -0.7
TNFAIP3-202ENST00000420009 EIF2S3P41091 472 aaKnown RBP10.68□□□□□ -0.7
TNFAIP3-202ENST00000420009 ZBTB16Q05516 673 aa10.68□□□□□ -0.7
TNFAIP3-202ENST00000420009 PDE4CQ08493 712 aa10.68□□□□□ -0.7
TNFAIP3-202ENST00000420009 EFEMP1Q12805 493 aa10.68□□□□□ -0.7
TNFAIP3-202ENST00000420009 CCDC157Q569K6 752 aa10.68□□□□□ -0.7
TNFAIP3-202ENST00000420009 C1orf220Q5T0J3 134 aa10.68□□□□□ -0.7
TNFAIP3-202ENST00000420009 SHC4Q6S5L8 630 aa10.68□□□□□ -0.7
TNFAIP3-202ENST00000420009 DENND1CQ8IV53 801 aa10.68□□□□□ -0.7
TNFAIP3-202ENST00000420009 IQUBQ8NA54 791 aa10.68□□□□□ -0.7
TNFAIP3-202ENST00000420009 NT5C1AQ9BXI3 368 aa10.68□□□□□ -0.7
TNFAIP3-202ENST00000420009 BTBD1Q9H0C5 482 aa10.68□□□□□ -0.7
TNFAIP3-202ENST00000420009 SLC39A2Q9NP94 309 aa10.68□□□□□ -0.7
TNFAIP3-202ENST00000420009 MTMR6Q9Y217 621 aa10.68□□□□□ -0.7
TNFAIP3-202ENST00000420009 MYH10P35580 1976 aa10.67□□□□□ -0.7
TNFAIP3-202ENST00000420009 A0A1B0GTQ1 180 aa10.67□□□□□ -0.7
TNFAIP3-202ENST00000420009 PVALEFA0A1B0GWK0 134 aa10.67□□□□□ -0.7
TNFAIP3-202ENST00000420009 C10orf142B7Z368 130 aa10.67□□□□□ -0.7
TNFAIP3-202ENST00000420009 VILLO15195 856 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms