RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 PARD3BQ8TEW8 1205 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 THAP3Q8WTV1 239 aaPredicted RBP7.39□□□□□ -1.23
HMGN1-205ENST00000419378 C2orf15Q8WU43 125 aaKnown RBP7.39□□□□□ -1.23
HMGN1-205ENST00000419378 KBTBD7Q8WVZ9 684 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 ERCC4Q92889 916 aaPredicted RBP7.39□□□□□ -1.23
HMGN1-205ENST00000419378 FGF14Q92915 247 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 TCEAL4Q96EI5 215 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 SGSM3Q96HU1 749 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 ZNF512Q96ME7 567 aaPredicted RBP7.39□□□□□ -1.23
HMGN1-205ENST00000419378 TIGD1Q96MW7 591 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 PKMYT1Q99640 499 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 SEPT5Q99719 369 aaPredicted RBP7.39□□□□□ -1.23
HMGN1-205ENST00000419378 ACBD6Q9BR61 282 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 NOL6Q9H6R4 1146 aaKnown RBP7.39□□□□□ -1.23
HMGN1-205ENST00000419378 ASAH2Q9NR71 780 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 TMLHEQ9NVH6 421 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 RMND1Q9NWS8 449 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 CHMP5Q9NZZ3 219 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 FHOD1Q9Y613 1164 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 NUMBLQ9Y6R0 609 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 KMT2EQ8IZD2 1858 aa7.38□□□□□ -1.23
HMGN1-205ENST00000419378 ZNF197O14709 1029 aa7.38□□□□□ -1.23
HMGN1-205ENST00000419378 GABRDO14764 452 aa7.38□□□□□ -1.23
HMGN1-205ENST00000419378 CYP26A1O43174 497 aa7.38□□□□□ -1.23
HMGN1-205ENST00000419378 SIGLEC6O43699 453 aa7.38□□□□□ -1.23
HMGN1-205ENST00000419378 KINO60870 393 aaKnown RBP7.38□□□□□ -1.23
HMGN1-205ENST00000419378 MOSPD3O75425 235 aa7.38□□□□□ -1.23
HMGN1-205ENST00000419378 AKAP3O75969 853 aa7.38□□□□□ -1.23
HMGN1-205ENST00000419378 SMC2O95347 1197 aa7.38□□□□□ -1.23
HMGN1-205ENST00000419378 PRAMEF1O95521 474 aa7.38□□□□□ -1.23
HMGN1-205ENST00000419378 PDGFBP01127 241 aaPredicted RBP7.38□□□□□ -1.23
HMGN1-205ENST00000419378 FAM153BP0C7A2 387 aa7.38□□□□□ -1.23
HMGN1-205ENST00000419378 HAPLN1P10915 354 aaPredicted RBP7.38□□□□□ -1.23
HMGN1-205ENST00000419378 SRFP11831 508 aa7.38□□□□□ -1.23
HMGN1-205ENST00000419378 MYL4P12829 197 aa7.38□□□□□ -1.23
HMGN1-205ENST00000419378 GJA1P17302 382 aa7.38□□□□□ -1.23
HMGN1-205ENST00000419378 WARSP23381 471 aaKnown RBP7.38□□□□□ -1.23
HMGN1-205ENST00000419378 NR2F2P24468 414 aa7.38□□□□□ -1.23
HMGN1-205ENST00000419378 PCSK1P29120 753 aa7.38□□□□□ -1.23
HMGN1-205ENST00000419378 LHX1P48742 406 aa7.38□□□□□ -1.23
HMGN1-205ENST00000419378 TUFMP49411 452 aaKnown RBP7.38□□□□□ -1.23
HMGN1-205ENST00000419378 AP3M2P53677 418 aa7.38□□□□□ -1.23
HMGN1-205ENST00000419378 EPHB3P54753 998 aa7.38□□□□□ -1.23
HMGN1-205ENST00000419378 MYL6P60660 151 aa7.38□□□□□ -1.23
HMGN1-205ENST00000419378 TNNC1P63316 161 aa7.38□□□□□ -1.23
HMGN1-205ENST00000419378 BIRC3Q13489 604 aa7.38□□□□□ -1.23
HMGN1-205ENST00000419378 SQSTM1Q13501 440 aa7.38□□□□□ -1.23
HMGN1-205ENST00000419378 TRPC3Q13507 836 aa7.38□□□□□ -1.23
HMGN1-205ENST00000419378 VEPH1Q14D04 833 aa7.38□□□□□ -1.23
HMGN1-205ENST00000419378 NFE2Q16621 373 aaPredicted RBP7.38□□□□□ -1.23
HMGN1-205ENST00000419378 ZACNQ401N2 412 aa7.38□□□□□ -1.23
HMGN1-205ENST00000419378 C1orf220Q5T0J3 134 aa7.38□□□□□ -1.23
HMGN1-205ENST00000419378 CYP4A22Q5TCH4 519 aa7.38□□□□□ -1.23
HMGN1-205ENST00000419378 ZNF658Q5TYW1 1059 aaPredicted RBP7.38□□□□□ -1.23
HMGN1-205ENST00000419378 PARM1Q6UWI2 310 aa7.38□□□□□ -1.23
HMGN1-205ENST00000419378 MTSS1LQ765P7 747 aa7.38□□□□□ -1.23
HMGN1-205ENST00000419378 SUGP1Q8IWZ8 645 aaKnown RBP7.38□□□□□ -1.23
HMGN1-205ENST00000419378 ARHGEF39Q8N4T4 335 aa7.38□□□□□ -1.23
HMGN1-205ENST00000419378 BVESQ8NE79 360 aa7.38□□□□□ -1.23
HMGN1-205ENST00000419378 SPATA20Q8TB22 786 aa7.38□□□□□ -1.23
HMGN1-205ENST00000419378 SPPL2BQ8TCT7 592 aa7.38□□□□□ -1.23
HMGN1-205ENST00000419378 SMARCE1Q969G3 411 aa7.38□□□□□ -1.23
HMGN1-205ENST00000419378 PSMG2Q969U7 264 aa7.38□□□□□ -1.23
HMGN1-205ENST00000419378 MCRS1Q96EZ8 462 aa7.38□□□□□ -1.23
HMGN1-205ENST00000419378 RCC1LQ96I51 464 aaKnown RBP7.38□□□□□ -1.23
HMGN1-205ENST00000419378 GSDMAQ96QA5 445 aa7.38□□□□□ -1.23
HMGN1-205ENST00000419378 MMS19Q96T76 1030 aa7.38□□□□□ -1.23
HMGN1-205ENST00000419378 SYT15Q9BQS2 421 aa7.38□□□□□ -1.23
HMGN1-205ENST00000419378 MRPL45Q9BRJ2 306 aaKnown RBP7.38□□□□□ -1.23
HMGN1-205ENST00000419378 RPP25Q9BUL9 199 aaKnown RBP7.38□□□□□ -1.23
HMGN1-205ENST00000419378 XYLT2Q9H1B5 865 aa7.38□□□□□ -1.23
HMGN1-205ENST00000419378 ZNF334Q9HCZ1 680 aaPredicted RBP7.38□□□□□ -1.23
HMGN1-205ENST00000419378 GDE1Q9NZC3 331 aa7.38□□□□□ -1.23
HMGN1-205ENST00000419378 CGGBP1Q9UFW8 167 aaPredicted RBP7.38□□□□□ -1.23
HMGN1-205ENST00000419378 HOOK1Q9UJC3 728 aaKnown RBP7.38□□□□□ -1.23
HMGN1-205ENST00000419378 FRMD4BQ9Y2L6 1034 aa7.38□□□□□ -1.23
HMGN1-205ENST00000419378 PCDHA5Q9Y5H7 936 aa7.38□□□□□ -1.23
HMGN1-205ENST00000419378 ST14Q9Y5Y6 855 aa7.38□□□□□ -1.23
HMGN1-205ENST00000419378 ESYT3A0FGR9 886 aa7.37□□□□□ -1.23
HMGN1-205ENST00000419378 MYBPHLA2RUH7 354 aa7.37□□□□□ -1.23
HMGN1-205ENST00000419378 MAPK13O15264 365 aa7.37□□□□□ -1.23
HMGN1-205ENST00000419378 TBX1O43435 398 aa7.37□□□□□ -1.23
HMGN1-205ENST00000419378 TACC1O75410 805 aa7.37□□□□□ -1.23
HMGN1-205ENST00000419378 ECI2O75521 394 aa7.37□□□□□ -1.23
HMGN1-205ENST00000419378 VNN1O95497 513 aa7.37□□□□□ -1.23
HMGN1-205ENST00000419378 C4BPAP04003 597 aaKnown RBP7.37□□□□□ -1.23
HMGN1-205ENST00000419378 FCARP24071 287 aa7.37□□□□□ -1.23
HMGN1-205ENST00000419378 LMO2P25791 158 aa7.37□□□□□ -1.23
HMGN1-205ENST00000419378 RPL13P26373 211 aaKnown RBP7.37□□□□□ -1.23
HMGN1-205ENST00000419378 ATICP31939 592 aa7.37□□□□□ -1.23
HMGN1-205ENST00000419378 PSMC2P35998 433 aaKnown RBP7.37□□□□□ -1.23
HMGN1-205ENST00000419378 PRCPP42785 496 aa7.37□□□□□ -1.23
HMGN1-205ENST00000419378 GPR15P49685 360 aa7.37□□□□□ -1.23
HMGN1-205ENST00000419378 VAMP7P51809 220 aa7.37□□□□□ -1.23
HMGN1-205ENST00000419378 VCPP55072 806 aaKnown RBP7.37□□□□□ -1.23
HMGN1-205ENST00000419378 PSMC1P62191 440 aaKnown RBP7.37□□□□□ -1.23
HMGN1-205ENST00000419378 ADAM9Q13443 819 aa7.37□□□□□ -1.23
HMGN1-205ENST00000419378 TEAD2Q15562 447 aa7.37□□□□□ -1.23
HMGN1-205ENST00000419378 CPSF6Q16630 551 aaKnown RBP eCLIP7.37□□□□□ -1.23
HMGN1-205ENST00000419378 CLEC16AQ2KHT3 1053 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms