RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 TRAFD1O14545 582 aaPredicted RBP12.27□□□□□ -0.44
LIMK1-202ENST00000418310 KIF1CO43896 1103 aaKnown RBP12.27□□□□□ -0.44
LIMK1-202ENST00000418310 CNMDO75829 334 aa12.27□□□□□ -0.44
LIMK1-202ENST00000418310 GABRB2P47870 512 aa12.27□□□□□ -0.44
LIMK1-202ENST00000418310 DCAF6Q58WW2 860 aa12.27□□□□□ -0.44
LIMK1-202ENST00000418310 PLPPR4Q7Z2D5 763 aa12.27□□□□□ -0.44
LIMK1-202ENST00000418310 COLGALT1Q8NBJ5 622 aa12.27□□□□□ -0.44
LIMK1-202ENST00000418310 ZNF398Q8TD17 642 aa12.27□□□□□ -0.44
LIMK1-202ENST00000418310 ZNF333Q96JL9 665 aa12.27□□□□□ -0.44
LIMK1-202ENST00000418310 OSMRQ99650 979 aa12.27□□□□□ -0.44
LIMK1-202ENST00000418310 OXCT2Q9BYC2 517 aaPredicted RBP12.27□□□□□ -0.44
LIMK1-202ENST00000418310 SETD4Q9NVD3 440 aa12.27□□□□□ -0.44
LIMK1-202ENST00000418310 DTLQ9NZJ0 730 aa12.27□□□□□ -0.44
LIMK1-202ENST00000418310 TXNDC16Q9P2K2 825 aa12.27□□□□□ -0.44
LIMK1-202ENST00000418310 FETUBQ9UGM5 382 aa12.27□□□□□ -0.44
LIMK1-202ENST00000418310 HBS1LQ9Y450 684 aaKnown RBP12.27□□□□□ -0.44
LIMK1-202ENST00000418310 LRRC42Q9Y546 428 aa12.27□□□□□ -0.44
LIMK1-202ENST00000418310 MFSD11O43934 449 aa12.27□□□□□ -0.45
LIMK1-202ENST00000418310 TSPAN1O60635 241 aa12.27□□□□□ -0.45
LIMK1-202ENST00000418310 SMIM24O75264 130 aa12.27□□□□□ -0.45
LIMK1-202ENST00000418310 MCF2P10911 925 aa12.27□□□□□ -0.45
LIMK1-202ENST00000418310 PSMB4P28070 264 aa12.27□□□□□ -0.45
LIMK1-202ENST00000418310 ARMCX2Q7L311 632 aa12.27□□□□□ -0.45
LIMK1-202ENST00000418310 SCUBE1Q8IWY4 988 aa12.27□□□□□ -0.45
LIMK1-202ENST00000418310 SLC2A14Q8TDB8 520 aa12.27□□□□□ -0.45
LIMK1-202ENST00000418310 CSPG4P5Q96PW8 444 aa12.27□□□□□ -0.45
LIMK1-202ENST00000418310 WWP1Q9H0M0 922 aa12.27□□□□□ -0.45
LIMK1-202ENST00000418310 NXF3Q9H4D5 531 aaKnown RBP12.27□□□□□ -0.45
LIMK1-202ENST00000418310 ZNF408Q9H9D4 720 aa12.27□□□□□ -0.45
LIMK1-202ENST00000418310 CAB39LQ9H9S4 337 aa12.27□□□□□ -0.45
LIMK1-202ENST00000418310 CDHR5Q9HBB8 845 aa12.27□□□□□ -0.45
LIMK1-202ENST00000418310 PARP14Q460N5 1801 aa12.27□□□□□ -0.45
LIMK1-202ENST00000418310 CIB2O75838 187 aa12.27□□□□□ -0.45
LIMK1-202ENST00000418310 ENDOD1O94919 500 aa12.27□□□□□ -0.45
LIMK1-202ENST00000418310 L1CAMP32004 1257 aa12.27□□□□□ -0.45
LIMK1-202ENST00000418310 NUMBP49757 651 aa12.27□□□□□ -0.45
LIMK1-202ENST00000418310 SLC34A1Q06495 639 aa12.27□□□□□ -0.45
LIMK1-202ENST00000418310 DLG2Q15700 870 aa12.27□□□□□ -0.45
LIMK1-202ENST00000418310 CATSPER4Q7RTX7 472 aa12.27□□□□□ -0.45
LIMK1-202ENST00000418310 CDKL3Q8IVW4 592 aaPredicted RBP12.27□□□□□ -0.45
LIMK1-202ENST00000418310 ENDOVQ8N8Q3 282 aaKnown RBP12.27□□□□□ -0.45
LIMK1-202ENST00000418310 CPSF2Q9P2I0 782 aaKnown RBP12.27□□□□□ -0.45
LIMK1-202ENST00000418310 ATP9BO43861 1147 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 GAS2O43903 313 aaKnown RBP12.26□□□□□ -0.45
LIMK1-202ENST00000418310 BPGMP07738 259 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 DESP17661 470 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 SULT1E1P49888 294 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 OCRLQ01968 901 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 TNFAIP2Q03169 654 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 USP4Q13107 963 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 PDK2Q15119 407 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 C10orf107Q8IVU9 208 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 ULK2Q8IYT8 1036 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 MTBPQ96DY7 904 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 PANX3Q96QZ0 392 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 MPHOSPH6Q99547 160 aaKnown RBP12.26□□□□□ -0.45
LIMK1-202ENST00000418310 CYP3A43Q9HB55 503 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 SYBUQ9NX95 663 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 SLC7A8Q9UHI5 535 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 GOLGA8QA0A0J9YX86 632 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 GOLGA8OA6NCC3 632 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 GOLGA8NF8WBI6 632 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 NEMP1O14524 444 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 MAP3K7O43318 606 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 SPAG6O75602 509 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 TGM2P21980 687 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 IGFBP6P24592 240 aaPredicted RBP12.26□□□□□ -0.45
LIMK1-202ENST00000418310 NDUFV1P49821 464 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 ITGA9Q13797 1035 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 TCHHL1Q5QJ38 904 aaPredicted RBP12.26□□□□□ -0.45
LIMK1-202ENST00000418310 IZUMO2Q6UXV1 221 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 ATG14Q6ZNE5 492 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 ASB7Q9H672 318 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 XPNPEP3Q9NQH7 507 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 GJD2Q9UKL4 321 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 PPM1HQ9ULR3 514 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 RNF103O00237 685 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 ALDOAP04075 364 aaKnown RBP12.26□□□□□ -0.45
LIMK1-202ENST00000418310 PRKCHP24723 683 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 TYK2P29597 1187 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 ARL4AP40617 200 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 ACAP1Q15027 740 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 SH3D19Q5HYK7 790 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 SLC9A4Q6AI14 798 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 PID1Q7Z2X4 250 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 RASSF3Q86WH2 238 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 DEFB106AQ8N104 65 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 PHC3Q8NDX5 983 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 SLC26A7Q8TE54 656 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 SH3TC2Q8TF17 1288 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 HTR3CQ8WXA8 447 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 ZNF778Q96MU6 729 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 TLE6Q9H808 572 aa12.26□□□□□ -0.45
LIMK1-202ENST00000418310 E9PBE3 544 aa12.25□□□□□ -0.45
LIMK1-202ENST00000418310 ADCY6O43306 1168 aa12.25□□□□□ -0.45
LIMK1-202ENST00000418310 KLHL41O60662 606 aa12.25□□□□□ -0.45
LIMK1-202ENST00000418310 CHRM1P11229 460 aaPredicted RBP12.25□□□□□ -0.45
LIMK1-202ENST00000418310 TPH1P17752 444 aa12.25□□□□□ -0.45
LIMK1-202ENST00000418310 ATICP31939 592 aa12.25□□□□□ -0.45
LIMK1-202ENST00000418310 MSX2P35548 267 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms