RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.9□□□□□ -1.46
ECHDC1-206ENST00000417628 POLQO75417 2590 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 NBPF19A0A087WUL8 3843 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 GOLGA6L10A6NI86 522 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 F8VZ95 297 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 FIBPO43427 364 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 ATP9AO75110 1047 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 GJB3O75712 270 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 CKMP06732 381 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 RHOP08100 348 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 H2AFB1P0C5Y9 115 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 H2AFB2P0C5Z0 115 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 STIP1P31948 543 aaKnown RBP5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 PTGER3P43115 390 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 AFMP43652 599 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 CRYBB1P53674 252 aaPredicted RBP5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 TFAP4Q01664 338 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 TEKQ02763 1124 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 GRM4Q14833 912 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 POSTNQ15063 836 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 KIZQ2M2Z5 673 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 PLA2G4EQ3MJ16 856 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 KBTBD12Q3ZCT8 623 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 PIK3R6Q5UE93 754 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 LMBRD2Q68DH5 695 aaPredicted RBP5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 IQCEQ6IPM2 695 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 MTHFD1LQ6UB35 978 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 UBE2R2Q712K3 238 aaPredicted RBP5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 TAS1R1Q7RTX1 841 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 MTDHQ86UE4 582 aaKnown RBP5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 ERICH1Q86X53 443 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 SPATS2Q86XZ4 545 aaKnown RBP5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 MYLK4Q86YV6 388 aaPredicted RBP5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 ZDHHC13Q8IUH4 622 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 CCDC50Q8IVM0 306 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 YAF2Q8IY57 180 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 SRRM1Q8IYB3 904 aaKnown RBP5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 RNF168Q8IYW5 571 aaPredicted RBP5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 TMEM52Q8NDY8 209 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 OR8K1Q8NGG5 319 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 ERMNQ8TAM6 284 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 TRAPPC12Q8WVT3 735 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 MOCOSQ96EN8 888 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 THOC1Q96FV9 657 aaKnown RBP5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 PTCHD1Q96NR3 888 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 PPP1R16BQ96T49 567 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 ORAI3Q9BRQ5 295 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 TMEM175Q9BSA9 504 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 TPSD1Q9BZJ3 242 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 TSPY26PQ9H489 355 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 SMARCAD1Q9H4L7 1026 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 ATP13A1Q9HD20 1204 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 STARD5Q9NSY2 213 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 POLR3BQ9NW08 1133 aaPredicted RBP5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 TUBA8Q9NY65 449 aaPredicted RBP5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 SAMD15Q9P1V8 674 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 DKK3Q9UBP4 350 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 DUSP13Q9UII6 198 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 PILRBQ9UKJ0 227 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 FAN1Q9Y2M0 1017 aa5.89□□□□□ -1.47
ECHDC1-206ENST00000417628 PCDH15Q96QU1 1955 aa5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 NPHP3-ACAD11A0A0J9YXS1 232 aa5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 PRR19A6NJB7 356 aa5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 ALG1L2C9J202 215 aa5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 CHADO15335 359 aa5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 NEMFO60524 1076 aa5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 S100BP04271 92 aaPredicted RBP5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 ZNF24P17028 368 aa5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 PAMP19021 973 aa5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 ADD2P35612 726 aa5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 HNF1BP35680 557 aa5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 HSD17B4P51659 736 aa5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 EXOSC10Q01780 885 aaKnown RBP5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 DOC2BQ14184 412 aa5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 DHX8Q14562 1220 aaKnown RBP5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 KRT72Q14CN4 511 aa5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 RTP5Q14D33 572 aa5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 CPSF6Q16630 551 aaKnown RBP eCLIP5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 IFI16Q16666 785 aaKnown RBP5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 ANKRD45Q5TZF3 282 aa5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 MICALCLQ6ZW33 695 aa5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 SYT13Q7L8C5 426 aa5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 TMPRSS12Q86WS5 348 aa5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 CPNE8Q86YQ8 564 aa5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 CREG2Q8IUH2 290 aa5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 MFSD6LQ8IWD5 586 aa5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 WDR63Q8IWG1 891 aa5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 IGSF22Q8N9C0 903 aa5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 ZNF248Q8NDW4 579 aa5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 CTCFLQ8NI51 663 aaPredicted RBP5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 FAM81AQ8TBF8 368 aa5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 URGCPQ8TCY9 931 aa5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 SETD7Q8WTS6 366 aaKnown RBP5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 SMARCD2Q92925 531 aa5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 CABS1Q96KC9 395 aa5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 INPP4AQ96PE3 977 aaPredicted RBP5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 FAM193BQ96PV7 902 aaPredicted RBP5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 MEIS3Q99687 375 aa5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 CDADC1Q9BWV3 514 aa5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 MAK16Q9BXY0 300 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms