RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 ATXN2LQ8WWM7 1075 aaKnown RBP8.79□□□□□ -1
TRIM48-201ENST00000417545 HSPH1Q92598 858 aa8.79□□□□□ -1
TRIM48-201ENST00000417545 KHSRPQ92945 711 aaKnown RBP eCLIP8.79□□□□□ -1
TRIM48-201ENST00000417545 ELSPBP1Q96BH3 223 aa8.79□□□□□ -1
TRIM48-201ENST00000417545 PGAP3Q96FM1 320 aaPredicted RBP8.79□□□□□ -1
TRIM48-201ENST00000417545 BTN2A3PQ96KV6 586 aa8.79□□□□□ -1
TRIM48-201ENST00000417545 ZSWIM3Q96MP5 696 aa8.79□□□□□ -1
TRIM48-201ENST00000417545 TRIM7Q9C029 511 aa8.79□□□□□ -1
TRIM48-201ENST00000417545 PIGVQ9NUD9 493 aa8.79□□□□□ -1
TRIM48-201ENST00000417545 DUS2Q9NX74 493 aaKnown RBP8.79□□□□□ -1
TRIM48-201ENST00000417545 OBP2AQ9NY56 170 aa8.79□□□□□ -1
TRIM48-201ENST00000417545 EPS15L1Q9UBC2 864 aa8.79□□□□□ -1
TRIM48-201ENST00000417545 PRKAG3Q9UGI9 489 aa8.79□□□□□ -1
TRIM48-201ENST00000417545 USP18Q9UMW8 372 aa8.79□□□□□ -1
TRIM48-201ENST00000417545 F5H5T6 163 aa8.78□□□□□ -1
TRIM48-201ENST00000417545 NRG2O14511 850 aaPredicted RBP8.78□□□□□ -1
TRIM48-201ENST00000417545 DAPK3O43293 454 aa8.78□□□□□ -1
TRIM48-201ENST00000417545 ACSL4O60488 711 aa8.78□□□□□ -1
TRIM48-201ENST00000417545 LRCH4O75427 683 aa8.78□□□□□ -1
TRIM48-201ENST00000417545 ECI2O75521 394 aa8.78□□□□□ -1
TRIM48-201ENST00000417545 PALMO75781 387 aa8.78□□□□□ -1
TRIM48-201ENST00000417545 NFATC1O95644 943 aa8.78□□□□□ -1
TRIM48-201ENST00000417545 LATS1O95835 1130 aa8.78□□□□□ -1
TRIM48-201ENST00000417545 KRT1P04264 644 aa8.78□□□□□ -1
TRIM48-201ENST00000417545 PSMC3P17980 439 aa8.78□□□□□ -1
TRIM48-201ENST00000417545 TFE3P19532 575 aaPredicted RBP8.78□□□□□ -1
TRIM48-201ENST00000417545 COMTP21964 271 aa8.78□□□□□ -1
TRIM48-201ENST00000417545 WEE1P30291 646 aa8.78□□□□□ -1
TRIM48-201ENST00000417545 MIPP30301 263 aa8.78□□□□□ -1
TRIM48-201ENST00000417545 PCK1P35558 622 aa8.78□□□□□ -1
TRIM48-201ENST00000417545 CHKAP35790 457 aa8.78□□□□□ -1
TRIM48-201ENST00000417545 CXCR3P49682 368 aa8.78□□□□□ -1
TRIM48-201ENST00000417545 DNA2P51530 1060 aa8.78□□□□□ -1
TRIM48-201ENST00000417545 ATXN1P54253 815 aaKnown RBP8.78□□□□□ -1
TRIM48-201ENST00000417545 AIF1P55008 147 aa8.78□□□□□ -1
TRIM48-201ENST00000417545 HADHBP55084 474 aaKnown RBP8.78□□□□□ -1
TRIM48-201ENST00000417545 HDAC4P56524 1084 aa8.78□□□□□ -1
TRIM48-201ENST00000417545 NR1H3Q13133 447 aa8.78□□□□□ -1
TRIM48-201ENST00000417545 GRM2Q14416 872 aa8.78□□□□□ -1
TRIM48-201ENST00000417545 ZNF77Q15935 545 aa8.78□□□□□ -1
TRIM48-201ENST00000417545 RABGAP1LQ5R372 815 aa8.78□□□□□ -1
TRIM48-201ENST00000417545 ACBD5Q5T8D3 534 aaPredicted RBP8.78□□□□□ -1
TRIM48-201ENST00000417545 SH3PXD2AQ5TCZ1 1133 aa8.78□□□□□ -1
TRIM48-201ENST00000417545 RAP1GAP2Q684P5 730 aa8.78□□□□□ -1
TRIM48-201ENST00000417545 TANGO2Q6ICL3 276 aa8.78□□□□□ -1
TRIM48-201ENST00000417545 CCDC50Q8IVM0 306 aa8.78□□□□□ -1
TRIM48-201ENST00000417545 RHOT1Q8IXI2 618 aa8.78□□□□□ -1
TRIM48-201ENST00000417545 CCAR2Q8N163 923 aaKnown RBP8.78□□□□□ -1
TRIM48-201ENST00000417545 NIPA2Q8N8Q9 360 aa8.78□□□□□ -1
TRIM48-201ENST00000417545 CSGALNACT1Q8TDX6 532 aa8.78□□□□□ -1
TRIM48-201ENST00000417545 NXPE3Q969Y0 559 aa8.78□□□□□ -1
TRIM48-201ENST00000417545 FCRL2Q96LA5 508 aaPredicted RBP8.78□□□□□ -1
TRIM48-201ENST00000417545 EPAS1Q99814 870 aa8.78□□□□□ -1
TRIM48-201ENST00000417545 TRMT61BQ9BVS5 477 aaKnown RBP8.78□□□□□ -1
TRIM48-201ENST00000417545 DHX35Q9H5Z1 703 aaKnown RBP8.78□□□□□ -1
TRIM48-201ENST00000417545 BRD9Q9H8M2 597 aa8.78□□□□□ -1
TRIM48-201ENST00000417545 STIM2Q9P246 746 aa8.78□□□□□ -1
TRIM48-201ENST00000417545 LIMD1Q9UGP4 676 aa8.78□□□□□ -1
TRIM48-201ENST00000417545 AP4E1Q9UPM8 1137 aa8.78□□□□□ -1
TRIM48-201ENST00000417545 CCL26Q9Y258 94 aa8.78□□□□□ -1
TRIM48-201ENST00000417545 ZKSCAN5Q9Y2L8 839 aa8.78□□□□□ -1
TRIM48-201ENST00000417545 NUMBLQ9Y6R0 609 aa8.78□□□□□ -1
TRIM48-201ENST00000417545 DUSP10Q9Y6W6 482 aa8.78□□□□□ -1
TRIM48-201ENST00000417545 CDH23Q9H251 3354 aa8.77□□□□□ -1.01
TRIM48-201ENST00000417545 A0A0U1RQJ8 604 aa8.77□□□□□ -1.01
TRIM48-201ENST00000417545 KCNU1A8MYU2 1149 aa8.77□□□□□ -1.01
TRIM48-201ENST00000417545 CREB3O43889 395 aa8.77□□□□□ -1.01
TRIM48-201ENST00000417545 TSPAN3O60637 253 aa8.77□□□□□ -1.01
TRIM48-201ENST00000417545 SRGAP2O75044 1071 aa8.77□□□□□ -1.01
TRIM48-201ENST00000417545 PAGE1O75459 146 aa8.77□□□□□ -1.01
TRIM48-201ENST00000417545 FTCDO95954 541 aa8.77□□□□□ -1.01
TRIM48-201ENST00000417545 ADH1CP00326 375 aa8.77□□□□□ -1.01
TRIM48-201ENST00000417545 IGLV3-25P01717 112 aa8.77□□□□□ -1.01
TRIM48-201ENST00000417545 TCF3P15923 654 aa8.77□□□□□ -1.01
TRIM48-201ENST00000417545 GDI1P31150 447 aa8.77□□□□□ -1.01
TRIM48-201ENST00000417545 ARL4AP40617 200 aa8.77□□□□□ -1.01
TRIM48-201ENST00000417545 TPI1P60174 286 aa8.77□□□□□ -1.01
TRIM48-201ENST00000417545 ZNF252P-AS1Q0IIN9 211 aa8.77□□□□□ -1.01
TRIM48-201ENST00000417545 TCEAL1Q15170 157 aa8.77□□□□□ -1.01
TRIM48-201ENST00000417545 PDGFRLQ15198 375 aa8.77□□□□□ -1.01
TRIM48-201ENST00000417545 SMTNL2Q2TAL5 461 aa8.77□□□□□ -1.01
TRIM48-201ENST00000417545 ANO4Q32M45 955 aa8.77□□□□□ -1.01
TRIM48-201ENST00000417545 BOLA3Q53S33 107 aa8.77□□□□□ -1.01
TRIM48-201ENST00000417545 PPP6R3Q5H9R7 873 aaPredicted RBP8.77□□□□□ -1.01
TRIM48-201ENST00000417545 ZNF569Q5MCW4 686 aa8.77□□□□□ -1.01
TRIM48-201ENST00000417545 ERMARDQ5T6L9 678 aa8.77□□□□□ -1.01
TRIM48-201ENST00000417545 DAB2IPQ5VWQ8 1189 aa8.77□□□□□ -1.01
TRIM48-201ENST00000417545 RWDD4Q6NW29 188 aaKnown RBP8.77□□□□□ -1.01
TRIM48-201ENST00000417545 PARM1Q6UWI2 310 aa8.77□□□□□ -1.01
TRIM48-201ENST00000417545 ZNF662Q6ZS27 426 aa8.77□□□□□ -1.01
TRIM48-201ENST00000417545 HTR3DQ70Z44 454 aa8.77□□□□□ -1.01
TRIM48-201ENST00000417545 MAP7D3Q8IWC1 876 aa8.77□□□□□ -1.01
TRIM48-201ENST00000417545 MFSD6LQ8IWD5 586 aa8.77□□□□□ -1.01
TRIM48-201ENST00000417545 ADHFE1Q8IWW8 467 aa8.77□□□□□ -1.01
TRIM48-201ENST00000417545 ZDHHC14Q8IZN3 488 aa8.77□□□□□ -1.01
TRIM48-201ENST00000417545 LGI2Q8N0V4 545 aa8.77□□□□□ -1.01
TRIM48-201ENST00000417545 CPA6Q8N4T0 437 aa8.77□□□□□ -1.01
TRIM48-201ENST00000417545 CCDC185Q8N715 623 aa8.77□□□□□ -1.01
TRIM48-201ENST00000417545 KCTD6Q8NC69 237 aa8.77□□□□□ -1.01
TRIM48-201ENST00000417545 DDI1Q8WTU0 396 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms