RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 ZC3H12AQ5D1E8 599 aaKnown RBP17.12■□□□□ 0.33
LINC00398-201ENST00000414407 TMEM31Q5JXX7 168 aa17.12■□□□□ 0.33
LINC00398-201ENST00000414407 BRMS1LQ5PSV4 323 aa17.12■□□□□ 0.33
LINC00398-201ENST00000414407 CCDC122Q5T0U0 273 aa17.12■□□□□ 0.33
LINC00398-201ENST00000414407 ACBD5Q5T8D3 534 aaPredicted RBP17.12■□□□□ 0.33
LINC00398-201ENST00000414407 OTUD1Q5VV17 481 aaPredicted RBP17.12■□□□□ 0.33
LINC00398-201ENST00000414407 SND1Q7KZF4 910 aaKnown RBP eCLIP17.12■□□□□ 0.33
LINC00398-201ENST00000414407 TMEM25Q86YD3 366 aa17.12■□□□□ 0.33
LINC00398-201ENST00000414407 EMC1Q8N766 993 aa17.12■□□□□ 0.33
LINC00398-201ENST00000414407 ATP6V0D2Q8N8Y2 350 aa17.12■□□□□ 0.33
LINC00398-201ENST00000414407 JOSD2Q8TAC2 188 aa17.12■□□□□ 0.33
LINC00398-201ENST00000414407 TTC8Q8TAM2 541 aa17.12■□□□□ 0.33
LINC00398-201ENST00000414407 RXFP2Q8WXD0 754 aa17.12■□□□□ 0.33
LINC00398-201ENST00000414407 CHFRQ96EP1 664 aa17.12■□□□□ 0.33
LINC00398-201ENST00000414407 CFAP57Q96MR6 1250 aa17.12■□□□□ 0.33
LINC00398-201ENST00000414407 TBCBQ99426 244 aa17.12■□□□□ 0.33
LINC00398-201ENST00000414407 MRPL47Q9HD33 250 aaKnown RBP17.12■□□□□ 0.33
LINC00398-201ENST00000414407 LTB4R2Q9NPC1 389 aa17.12■□□□□ 0.33
LINC00398-201ENST00000414407 CNOT8Q9UFF9 292 aaKnown RBP17.12■□□□□ 0.33
LINC00398-201ENST00000414407 GOLGA6L3A6NEY3 463 aa17.11■□□□□ 0.33
LINC00398-201ENST00000414407 GPD1P21695 349 aa17.11■□□□□ 0.33
LINC00398-201ENST00000414407 FECHP22830 423 aa17.11■□□□□ 0.33
LINC00398-201ENST00000414407 RDXP35241 583 aaKnown RBP17.11■□□□□ 0.33
LINC00398-201ENST00000414407 ZNF143P52747 638 aaPredicted RBP17.11■□□□□ 0.33
LINC00398-201ENST00000414407 DEUP1Q05D60 604 aa17.11■□□□□ 0.33
LINC00398-201ENST00000414407 GFPT1Q06210 699 aaPredicted RBP17.11■□□□□ 0.33
LINC00398-201ENST00000414407 NME3Q13232 169 aa17.11■□□□□ 0.33
LINC00398-201ENST00000414407 GAB4Q2WGN9 574 aa17.11■□□□□ 0.33
LINC00398-201ENST00000414407 CCDC14Q49A88 953 aa17.11■□□□□ 0.33
LINC00398-201ENST00000414407 DCUN1D2Q6PH85 259 aa17.11■□□□□ 0.33
LINC00398-201ENST00000414407 STRADAQ7RTN6 431 aa17.11■□□□□ 0.33
LINC00398-201ENST00000414407 SUGP1Q8IWZ8 645 aaKnown RBP17.11■□□□□ 0.33
LINC00398-201ENST00000414407 FBXL6Q8N531 539 aa17.11■□□□□ 0.33
LINC00398-201ENST00000414407 CENPIQ92674 756 aaPredicted RBP17.11■□□□□ 0.33
LINC00398-201ENST00000414407 RNF34Q969K3 372 aa17.11■□□□□ 0.33
LINC00398-201ENST00000414407 ZNF653Q96CK0 615 aa17.11■□□□□ 0.33
LINC00398-201ENST00000414407 ADAM33Q9BZ11 813 aa17.11■□□□□ 0.33
LINC00398-201ENST00000414407 PIGVQ9NUD9 493 aa17.11■□□□□ 0.33
LINC00398-201ENST00000414407 CALCOCO1Q9P1Z2 691 aa17.11■□□□□ 0.33
LINC00398-201ENST00000414407 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.1■□□□□ 0.33
LINC00398-201ENST00000414407 STK25O00506 426 aa17.1■□□□□ 0.33
LINC00398-201ENST00000414407 NCAM2O15394 837 aa17.1■□□□□ 0.33
LINC00398-201ENST00000414407 GJB6O95452 261 aa17.1■□□□□ 0.33
LINC00398-201ENST00000414407 PDGFBP01127 241 aaPredicted RBP17.1■□□□□ 0.33
LINC00398-201ENST00000414407 PENKP01210 267 aaPredicted RBP17.1■□□□□ 0.33
LINC00398-201ENST00000414407 CYBBP04839 570 aa17.1■□□□□ 0.33
LINC00398-201ENST00000414407 DESP17661 470 aa17.1■□□□□ 0.33
LINC00398-201ENST00000414407 TFE3P19532 575 aaPredicted RBP17.1■□□□□ 0.33
LINC00398-201ENST00000414407 AOC1P19801 751 aa17.1■□□□□ 0.33
LINC00398-201ENST00000414407 RPL7AP62424 266 aaKnown RBP17.1■□□□□ 0.33
LINC00398-201ENST00000414407 PREPLQ4J6C6 727 aaPredicted RBP17.1■□□□□ 0.33
LINC00398-201ENST00000414407 MPPE1Q53F39 396 aa17.1■□□□□ 0.33
LINC00398-201ENST00000414407 FAM133BQ5BKY9 247 aaKnown RBP17.1■□□□□ 0.33
LINC00398-201ENST00000414407 MPP7Q5T2T1 576 aa17.1■□□□□ 0.33
LINC00398-201ENST00000414407 CWF19L1Q69YN2 538 aaKnown RBP17.1■□□□□ 0.33
LINC00398-201ENST00000414407 ASTLQ6HA08 431 aaPredicted RBP17.1■□□□□ 0.33
LINC00398-201ENST00000414407 TXNDC11Q6PKC3 985 aa17.1■□□□□ 0.33
LINC00398-201ENST00000414407 ETFBKMTQ8IXQ9 262 aa17.1■□□□□ 0.33
LINC00398-201ENST00000414407 CCDC170Q8IYT3 715 aa17.1■□□□□ 0.33
LINC00398-201ENST00000414407 ZNF687Q8N1G0 1237 aa17.1■□□□□ 0.33
LINC00398-201ENST00000414407 FLCNQ8NFG4 579 aa17.1■□□□□ 0.33
LINC00398-201ENST00000414407 PJA1Q8NG27 643 aa17.1■□□□□ 0.33
LINC00398-201ENST00000414407 FNIP1Q8TF40 1166 aa17.1■□□□□ 0.33
LINC00398-201ENST00000414407 MCEEQ96PE7 176 aa17.1■□□□□ 0.33
LINC00398-201ENST00000414407 P2RY13Q9BPV8 354 aa17.1■□□□□ 0.33
LINC00398-201ENST00000414407 BBS2Q9BXC9 721 aa17.1■□□□□ 0.33
LINC00398-201ENST00000414407 WDCPQ9H6R7 721 aa17.1■□□□□ 0.33
LINC00398-201ENST00000414407 GRPEL1Q9HAV7 217 aa17.1■□□□□ 0.33
LINC00398-201ENST00000414407 ARHGEF38Q9NXL2 777 aa17.1■□□□□ 0.33
LINC00398-201ENST00000414407 SYNJ2BP-COX16A0A087WUM0 186 aa17.09■□□□□ 0.33
LINC00398-201ENST00000414407 TMEM191CA6NGB0 347 aa17.09■□□□□ 0.33
LINC00398-201ENST00000414407 FAM170BA6NMN3 283 aa17.09■□□□□ 0.33
LINC00398-201ENST00000414407 GOLGA6L6A8MZA4 724 aa17.09■□□□□ 0.33
LINC00398-201ENST00000414407 ATMINO43313 823 aaPredicted RBP17.09■□□□□ 0.33
LINC00398-201ENST00000414407 CACNG3O60359 315 aa17.09■□□□□ 0.33
LINC00398-201ENST00000414407 CYP1A2P05177 515 aa17.09■□□□□ 0.33
LINC00398-201ENST00000414407 TYRP14679 529 aa17.09■□□□□ 0.33
LINC00398-201ENST00000414407 CD72P21854 359 aa17.09■□□□□ 0.33
LINC00398-201ENST00000414407 OPRD1P41143 372 aa17.09■□□□□ 0.33
LINC00398-201ENST00000414407 GALK1P51570 392 aa17.09■□□□□ 0.33
LINC00398-201ENST00000414407 GALCP54803 685 aa17.09■□□□□ 0.33
LINC00398-201ENST00000414407 ATP11AP98196 1134 aa17.09■□□□□ 0.33
LINC00398-201ENST00000414407 ANO4Q32M45 955 aa17.09■□□□□ 0.33
LINC00398-201ENST00000414407 TMEM196Q5HYL7 178 aa17.09■□□□□ 0.33
LINC00398-201ENST00000414407 C10orf76Q5T2E6 689 aa17.09■□□□□ 0.33
LINC00398-201ENST00000414407 FYB2Q5VWT5 728 aa17.09■□□□□ 0.33
LINC00398-201ENST00000414407 NADSYN1Q6IA69 706 aa17.09■□□□□ 0.33
LINC00398-201ENST00000414407 TPGS1Q6ZTW0 290 aa17.09■□□□□ 0.33
LINC00398-201ENST00000414407 DNAAF5Q86Y56 855 aa17.09■□□□□ 0.33
LINC00398-201ENST00000414407 TMTC1Q8IUR5 882 aa17.09■□□□□ 0.33
LINC00398-201ENST00000414407 CD101Q93033 1021 aa17.09■□□□□ 0.33
LINC00398-201ENST00000414407 TMA16Q96EY4 203 aaKnown RBP17.09■□□□□ 0.33
LINC00398-201ENST00000414407 XPO6Q96QU8 1125 aaKnown RBP17.09■□□□□ 0.33
LINC00398-201ENST00000414407 CNPY3Q9BT09 278 aa17.09■□□□□ 0.33
LINC00398-201ENST00000414407 THAP2Q9H0W7 228 aa17.09■□□□□ 0.33
LINC00398-201ENST00000414407 COX16Q9P0S2 106 aa17.09■□□□□ 0.33
LINC00398-201ENST00000414407 SIT1Q9Y3P8 196 aa17.09■□□□□ 0.33
LINC00398-201ENST00000414407 A0A0A0MRY4 1105 aa17.08■□□□□ 0.32
LINC00398-201ENST00000414407 FAM86C2PA6NEL3 165 aa17.08■□□□□ 0.32
LINC00398-201ENST00000414407 NEDD8-MDP1E9PL57 170 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms