RNA–Protein interactions for RNA: ENST00000413658.6

ZNF3-205, Transcript of zinc finger protein 3, human

TSL 1 (best) BASIC

Gene ZNF3, Length 1,441 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF3-205	ENST00000413658	TBX4	P57082	545 aa		10.69	□□□□□ -0.7
ZNF3-205	ENST00000413658	GRM2	Q14416	872 aa		10.69	□□□□□ -0.7
ZNF3-205	ENST00000413658	SPA17	Q15506	151 aa		10.69	□□□□□ -0.7
ZNF3-205	ENST00000413658	DCUN1D2	Q6PH85	259 aa		10.69	□□□□□ -0.7
ZNF3-205	ENST00000413658	ARFGAP1	Q8N6T3	406 aa		10.69	□□□□□ -0.7
ZNF3-205	ENST00000413658	BPIFB1	Q8TDL5	484 aa		10.69	□□□□□ -0.7
ZNF3-205	ENST00000413658	DEPDC1B	Q8WUY9	529 aa		10.69	□□□□□ -0.7
ZNF3-205	ENST00000413658	ATRIP	Q8WXE1	791 aa		10.69	□□□□□ -0.7
ZNF3-205	ENST00000413658	PLD4	Q96BZ4	506 aa		10.69	□□□□□ -0.7
ZNF3-205	ENST00000413658	FAM83C	Q9BQN1	747 aa		10.69	□□□□□ -0.7
ZNF3-205	ENST00000413658	DESI2	Q9BSY9	194 aa		10.69	□□□□□ -0.7
ZNF3-205	ENST00000413658	CNPY3	Q9BT09	278 aa		10.69	□□□□□ -0.7
ZNF3-205	ENST00000413658	LINC00597	Q9H2U6	94 aa		10.69	□□□□□ -0.7
ZNF3-205	ENST00000413658	MRPL47	Q9HD33	250 aa	Known RBP	10.69	□□□□□ -0.7
ZNF3-205	ENST00000413658	ANLN	Q9NQW6	1124 aa		10.69	□□□□□ -0.7
ZNF3-205	ENST00000413658	DDIT4	Q9NX09	232 aa		10.69	□□□□□ -0.7
ZNF3-205	ENST00000413658	UVRAG	Q9P2Y5	699 aa		10.69	□□□□□ -0.7
ZNF3-205	ENST00000413658	SALL4	Q9UJQ4	1053 aa		10.69	□□□□□ -0.7
ZNF3-205	ENST00000413658	STAP1	Q9ULZ2	295 aa		10.69	□□□□□ -0.7
ZNF3-205	ENST00000413658	GFRA2	O00451	464 aa		10.68	□□□□□ -0.7
ZNF3-205	ENST00000413658	PJA2	O43164	708 aa		10.68	□□□□□ -0.7
ZNF3-205	ENST00000413658	CCP110	O43303	1012 aa		10.68	□□□□□ -0.7
ZNF3-205	ENST00000413658	CORO1A	P31146	461 aa	Known RBP	10.68	□□□□□ -0.7
ZNF3-205	ENST00000413658	SDC4	P31431	198 aa		10.68	□□□□□ -0.7
ZNF3-205	ENST00000413658	HDAC4	P56524	1084 aa		10.68	□□□□□ -0.7
ZNF3-205	ENST00000413658	ATP11A	P98196	1134 aa		10.68	□□□□□ -0.7
ZNF3-205	ENST00000413658	CCDC173	Q0VFZ6	552 aa		10.68	□□□□□ -0.7
ZNF3-205	ENST00000413658	NME3	Q13232	169 aa		10.68	□□□□□ -0.7
ZNF3-205	ENST00000413658	PPP2R5D	Q14738	602 aa		10.68	□□□□□ -0.7
ZNF3-205	ENST00000413658	ZC3H12A	Q5D1E8	599 aa	Known RBP	10.68	□□□□□ -0.7
ZNF3-205	ENST00000413658	ARTN	Q5T4W7	220 aa		10.68	□□□□□ -0.7
ZNF3-205	ENST00000413658	STRADA	Q7RTN6	431 aa		10.68	□□□□□ -0.7
ZNF3-205	ENST00000413658	RNF135	Q8IUD6	432 aa		10.68	□□□□□ -0.7
ZNF3-205	ENST00000413658	BBS7	Q8IWZ6	715 aa		10.68	□□□□□ -0.7
ZNF3-205	ENST00000413658	FAM217A	Q8IXS0	508 aa		10.68	□□□□□ -0.7
ZNF3-205	ENST00000413658	GJD3	Q8N144	294 aa		10.68	□□□□□ -0.7
ZNF3-205	ENST00000413658	SLC35G2	Q8TBE7	412 aa		10.68	□□□□□ -0.7
ZNF3-205	ENST00000413658	ZNF564	Q8TBZ8	553 aa	Predicted RBP	10.68	□□□□□ -0.7
ZNF3-205	ENST00000413658	RFFL	Q8WZ73	363 aa		10.68	□□□□□ -0.7
ZNF3-205	ENST00000413658	ZFYVE19	Q96K21	471 aa		10.68	□□□□□ -0.7
ZNF3-205	ENST00000413658	BTBD6	Q96KE9	485 aa		10.68	□□□□□ -0.7
ZNF3-205	ENST00000413658	LACRT	Q9GZZ8	138 aa		10.68	□□□□□ -0.7
ZNF3-205	ENST00000413658	FAM204A	Q9H8W3	233 aa		10.68	□□□□□ -0.7
ZNF3-205	ENST00000413658	OSGEP	Q9NPF4	335 aa		10.68	□□□□□ -0.7
ZNF3-205	ENST00000413658	STOML2	Q9UJZ1	356 aa		10.68	□□□□□ -0.7
ZNF3-205	ENST00000413658	AGO1	Q9UL18	857 aa	Known RBP	10.68	□□□□□ -0.7
ZNF3-205	ENST00000413658	ADGRG1	Q9Y653	693 aa		10.68	□□□□□ -0.7
ZNF3-205	ENST00000413658	TTC28	Q96AY4	2481 aa		10.68	□□□□□ -0.7
ZNF3-205	ENST00000413658	SYNJ2BP-COX16	A0A087WUM0	186 aa		10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658		A0A0A6YYK5	440 aa	Predicted RBP	10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	OTOL1	A6NHN0	477 aa	Predicted RBP	10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	CHAD	O15335	359 aa		10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	NARS	O43776	548 aa	Known RBP	10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	GBP1	P32455	592 aa		10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	VAV2	P52735	878 aa		10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	HADHB	P55084	474 aa	Known RBP	10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	TDG	Q13569	410 aa		10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	CDO1	Q16878	200 aa		10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	EML3	Q32P44	896 aa		10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	TRIM68	Q6AZZ1	485 aa		10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	NADSYN1	Q6IA69	706 aa		10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	DENND1C	Q8IV53	801 aa		10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	NIPA2	Q8N8Q9	360 aa		10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	FAM172A	Q8WUF8	416 aa		10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	OSCP1	Q8WVF1	389 aa		10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	AZIN2	Q96A70	460 aa		10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	P2RY11	Q96G91	374 aa		10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	TRMT61B	Q9BVS5	477 aa	Known RBP	10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	DCLK3	Q9C098	648 aa		10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	HPS4	Q9NQG7	708 aa		10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	ARHGEF38	Q9NXL2	777 aa		10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	COX16	Q9P0S2	106 aa		10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	CTTNBP2NL	Q9P2B4	639 aa		10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	XPO7	Q9UIA9	1087 aa	Known RBP	10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	ANAPC7	Q9UJX3	599 aa		10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	SH3BP1	Q9Y3L3	701 aa		10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	WNT6	Q9Y6F9	365 aa		10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	DUSP10	Q9Y6W6	482 aa		10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	CHD5	Q8TDI0	1954 aa		10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	BTNL10	A8MVZ5	291 aa		10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	LATS1	O95835	1130 aa		10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	F9	P00740	461 aa		10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	ARSA	P15289	507 aa		10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	PSMA2	P25787	234 aa		10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	GDI1	P31150	447 aa		10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	CCR1	P32246	355 aa		10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	RDX	P35241	583 aa	Known RBP	10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	HARS2	P49590	506 aa	Known RBP	10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	KRT83	P78385	493 aa		10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	DEUP1	Q05D60	604 aa		10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	TNK2	Q07912	1038 aa		10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	ARHGAP29	Q52LW3	1261 aa		10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	FAM133B	Q5BKY9	247 aa	Known RBP	10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	BRMS1L	Q5PSV4	323 aa		10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	DAB2IP	Q5VWQ8	1189 aa		10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	NUGGC	Q68CJ6	796 aa		10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	FAM131B	Q86XD5	332 aa		10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	CPNE8	Q86YQ8	564 aa		10.67	□□□□□ -0.7
ZNF3-205	ENST00000413658	UNC45B	Q8IWX7	931 aa		10.67	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms