RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 TMEM215Q68D42 235 aa10.59□□□□□ -0.71
NCKIPSD-202ENST00000413374 RBM43Q6ZSC3 357 aaKnown RBP10.59□□□□□ -0.71
NCKIPSD-202ENST00000413374 FAM183BPQ6ZVS7 135 aa10.59□□□□□ -0.71
NCKIPSD-202ENST00000413374 TAC4Q86UU9 113 aa10.59□□□□□ -0.71
NCKIPSD-202ENST00000413374 UNC45BQ8IWX7 931 aa10.59□□□□□ -0.71
NCKIPSD-202ENST00000413374 FAM217AQ8IXS0 508 aa10.59□□□□□ -0.71
NCKIPSD-202ENST00000413374 TMEFF1Q8IYR6 380 aa10.59□□□□□ -0.71
NCKIPSD-202ENST00000413374 FAM71AQ8IYT1 594 aa10.59□□□□□ -0.71
NCKIPSD-202ENST00000413374 DEFB106AQ8N104 65 aa10.59□□□□□ -0.71
NCKIPSD-202ENST00000413374 CFAP52Q8N1V2 620 aa10.59□□□□□ -0.71
NCKIPSD-202ENST00000413374 GPR161Q8N6U8 529 aaKnown RBP10.59□□□□□ -0.71
NCKIPSD-202ENST00000413374 KCNV2Q8TDN2 545 aa10.59□□□□□ -0.71
NCKIPSD-202ENST00000413374 IPO4Q8TEX9 1081 aaKnown RBP10.59□□□□□ -0.71
NCKIPSD-202ENST00000413374 CYB5D2Q8WUJ1 264 aa10.59□□□□□ -0.71
NCKIPSD-202ENST00000413374 FCRL2Q96LA5 508 aaPredicted RBP10.59□□□□□ -0.71
NCKIPSD-202ENST00000413374 PCMTD1Q96MG8 357 aaPredicted RBP10.59□□□□□ -0.71
NCKIPSD-202ENST00000413374 SYNCQ9H7C4 482 aa10.59□□□□□ -0.71
NCKIPSD-202ENST00000413374 POPDC2Q9HBU9 364 aa10.59□□□□□ -0.71
NCKIPSD-202ENST00000413374 ANO10Q9NW15 660 aa10.59□□□□□ -0.71
NCKIPSD-202ENST00000413374 ELOVL2Q9NXB9 296 aa10.59□□□□□ -0.71
NCKIPSD-202ENST00000413374 XPO7Q9UIA9 1087 aaKnown RBP10.59□□□□□ -0.71
NCKIPSD-202ENST00000413374 STON1Q9Y6Q2 735 aa10.59□□□□□ -0.71
NCKIPSD-202ENST00000413374 ATG2BQ96BY7 2078 aa10.59□□□□□ -0.71
NCKIPSD-202ENST00000413374 ZBTB24O43167 697 aaPredicted RBP10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 SART1O43290 800 aaKnown RBP10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 EPN2O95208 641 aa10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 IGLV3-27P01718 113 aa10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 UCHL3P15374 230 aa10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 CDK11BP21127 795 aaKnown RBP10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 HOXD9P28356 352 aaPredicted RBP10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 HLA-FP30511 346 aa10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 P2RY2P41231 377 aa10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 IL12RB1P42701 662 aa10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 ARID5AQ03989 594 aa10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 CSRP2Q16527 193 aa10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 STX1AQ16623 288 aa10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 AASDHQ4L235 1098 aaPredicted RBP10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 C2CD6Q53TS8 623 aa10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 FAM133BQ5BKY9 247 aaKnown RBP10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 CCDC183Q5T5S1 534 aa10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 PIK3R6Q5UE93 754 aa10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 CDKAL1Q5VV42 579 aa10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 NUGGCQ68CJ6 796 aa10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 NADSYN1Q6IA69 706 aa10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 TCEAL6Q6IPX3 200 aa10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 KIAA1324Q6UXG2 1013 aaKnown RBP10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 PRR23CQ6ZRP0 262 aa10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 CHST9Q7L1S5 443 aa10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 PHLDB2Q86SQ0 1253 aa10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 CARNMT1Q8N4J0 409 aa10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 C12orf50Q8NA57 414 aaPredicted RBP10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 OLIG1Q8TAK6 271 aa10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 WFDC5Q8TCV5 224 aa10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 TCEAL3Q969E4 200 aa10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 RNF34Q969K3 372 aa10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 ZC3H10Q96K80 434 aaKnown RBP10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 SERPINB11Q96P15 392 aa10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 NAA15Q9BXJ9 866 aaKnown RBP10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 NUCKS1Q9H1E3 243 aaKnown RBP10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 LHX5Q9H2C1 402 aa10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 NLRC4Q9NPP4 1024 aa10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 CD93Q9NPY3 652 aa10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 RXFP3Q9NSD7 469 aa10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 FAM207AQ9NSI2 230 aaPredicted RBP10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 ABCB8Q9NUT2 735 aa10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 TMEM63CQ9P1W3 806 aa10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 MBD1Q9UIS9 605 aaPredicted RBP10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 STOML2Q9UJZ1 356 aa10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 PCDHGC3Q9UN70 934 aa10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 CYP8B1Q9UNU6 501 aa10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 TLR6Q9Y2C9 796 aa10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 SLC27A6Q9Y2P4 619 aa10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 GPR179Q6PRD1 2367 aa10.58□□□□□ -0.72
NCKIPSD-202ENST00000413374 DCDC2BA2VCK2 349 aa10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 GFRA2O00451 464 aa10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 GFPT2O94808 682 aa10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 CAVIN2O95810 425 aa10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 TRUB2O95900 331 aaKnown RBP10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 MBD3O95983 291 aa10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 TPM2P07951 284 aa10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 MMEP08473 750 aa10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 HLA-EP13747 358 aa10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 CYP11B1P15538 503 aa10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 NDUFV2P19404 249 aa10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 CD70P32970 193 aa10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 MPLP40238 635 aa10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 COPB1P53618 953 aaKnown RBP10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 ATXN1P54253 815 aaKnown RBP10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 BPIFB4P59827 614 aa10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 POLR2FP61218 127 aaKnown RBP10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 RPS24P62847 133 aaKnown RBP10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 CDK17Q00537 523 aa10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 LMNB2Q03252 620 aa10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 TYRO3Q06418 890 aa10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 NME3Q13232 169 aa10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 ZNF234Q14588 700 aa10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 MAP7D1Q3KQU3 841 aa10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 PTPN20Q4JDL3 420 aa10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 FKBP15Q5T1M5 1219 aa10.57□□□□□ -0.72
NCKIPSD-202ENST00000413374 RAP1GAP2Q684P5 730 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms