RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 LCP1P13796 627 aa20.07■□□□□ 0.8
CPSF7-204ENST00000413232 DPP6P42658 865 aa20.07■□□□□ 0.8
CPSF7-204ENST00000413232 SGSHP51688 502 aa20.07■□□□□ 0.8
CPSF7-204ENST00000413232 COPAP53621 1224 aa20.07■□□□□ 0.8
CPSF7-204ENST00000413232 DAOAP59103 153 aa20.07■□□□□ 0.8
CPSF7-204ENST00000413232 GFPT1Q06210 699 aaPredicted RBP20.07■□□□□ 0.8
CPSF7-204ENST00000413232 PMF1Q6P1K2 205 aa20.07■□□□□ 0.8
CPSF7-204ENST00000413232 TMEM270Q6UE05 265 aa20.07■□□□□ 0.8
CPSF7-204ENST00000413232 ANKS1BQ7Z6G8 1248 aa20.07■□□□□ 0.8
CPSF7-204ENST00000413232 TMPRSS6Q8IU80 811 aa20.07■□□□□ 0.8
CPSF7-204ENST00000413232 CLEC4CQ8WTT0 213 aa20.07■□□□□ 0.8
CPSF7-204ENST00000413232 SLC35F5Q8WV83 523 aa20.07■□□□□ 0.8
CPSF7-204ENST00000413232 TOE1Q96GM8 510 aaKnown RBP20.07■□□□□ 0.8
CPSF7-204ENST00000413232 TIGD1Q96MW7 591 aa20.07■□□□□ 0.8
CPSF7-204ENST00000413232 IPO9Q96P70 1041 aaKnown RBP20.07■□□□□ 0.8
CPSF7-204ENST00000413232 ITM2CQ9NQX7 267 aa20.07■□□□□ 0.8
CPSF7-204ENST00000413232 WSB2Q9NYS7 404 aaPredicted RBP20.07■□□□□ 0.8
CPSF7-204ENST00000413232 SPAARA0A1B0GVQ0 90 aa20.06■□□□□ 0.8
CPSF7-204ENST00000413232 ARHGAP33O14559 1287 aa20.06■□□□□ 0.8
CPSF7-204ENST00000413232 NDUFS2O75306 463 aa20.06■□□□□ 0.8
CPSF7-204ENST00000413232 CYBBP04839 570 aa20.06■□□□□ 0.8
CPSF7-204ENST00000413232 HLA-EP13747 358 aa20.06■□□□□ 0.8
CPSF7-204ENST00000413232 CD6P30203 668 aa20.06■□□□□ 0.8
CPSF7-204ENST00000413232 HLA-FP30511 346 aa20.06■□□□□ 0.8
CPSF7-204ENST00000413232 FAM193AP78312 1265 aa20.06■□□□□ 0.8
CPSF7-204ENST00000413232 TTI2Q6NXR4 508 aa20.06■□□□□ 0.8
CPSF7-204ENST00000413232 LCLAT1Q6UWP7 414 aa20.06■□□□□ 0.8
CPSF7-204ENST00000413232 METTL3Q86U44 580 aaKnown RBP20.06■□□□□ 0.8
CPSF7-204ENST00000413232 MINDY1Q8N5J2 469 aa20.06■□□□□ 0.8
CPSF7-204ENST00000413232 TMEM121BQ9BXQ6 578 aaPredicted RBP20.06■□□□□ 0.8
CPSF7-204ENST00000413232 SLC2A11Q9BYW1 496 aa20.06■□□□□ 0.8
CPSF7-204ENST00000413232 CIPCQ9C0C6 399 aa20.06■□□□□ 0.8
CPSF7-204ENST00000413232 OLA1Q9NTK5 396 aaKnown RBP20.06■□□□□ 0.8
CPSF7-204ENST00000413232 STOML2Q9UJZ1 356 aa20.06■□□□□ 0.8
CPSF7-204ENST00000413232 HBS1LQ9Y450 684 aaKnown RBP20.06■□□□□ 0.8
CPSF7-204ENST00000413232 PCDHB4Q9Y5E5 795 aa20.06■□□□□ 0.8
CPSF7-204ENST00000413232 PPP1R3GB7ZBB8 358 aa20.05■□□□□ 0.8
CPSF7-204ENST00000413232 SETSIPP0DME0 302 aa20.05■□□□□ 0.8
CPSF7-204ENST00000413232 NCAM1P13591 858 aa20.05■□□□□ 0.8
CPSF7-204ENST00000413232 CD59P13987 128 aa20.05■□□□□ 0.8
CPSF7-204ENST00000413232 TBXAS1P24557 533 aaPredicted RBP20.05■□□□□ 0.8
CPSF7-204ENST00000413232 BRD2P25440 801 aaKnown RBP20.05■□□□□ 0.8
CPSF7-204ENST00000413232 TPMTP51580 245 aa20.05■□□□□ 0.8
CPSF7-204ENST00000413232 YWHAEP62258 255 aaKnown RBP20.05■□□□□ 0.8
CPSF7-204ENST00000413232 STARD3Q14849 445 aa20.05■□□□□ 0.8
CPSF7-204ENST00000413232 MPPE1Q53F39 396 aa20.05■□□□□ 0.8
CPSF7-204ENST00000413232 KLHL10Q6JEL2 608 aa20.05■□□□□ 0.8
CPSF7-204ENST00000413232 CACUL1Q86Y37 369 aa20.05■□□□□ 0.8
CPSF7-204ENST00000413232 ARHGEF19Q8IW93 802 aa20.05■□□□□ 0.8
CPSF7-204ENST00000413232 RGL4Q8IZJ4 473 aa20.05■□□□□ 0.8
CPSF7-204ENST00000413232 SIX6OS1Q8N1H7 587 aa20.05■□□□□ 0.8
CPSF7-204ENST00000413232 SCML4Q8N228 414 aa20.05■□□□□ 0.8
CPSF7-204ENST00000413232 WFDC5Q8TCV5 224 aa20.05■□□□□ 0.8
CPSF7-204ENST00000413232 RNF139Q8WU17 664 aa20.05■□□□□ 0.8
CPSF7-204ENST00000413232 CYB5D2Q8WUJ1 264 aa20.05■□□□□ 0.8
CPSF7-204ENST00000413232 UCMAQ8WVF2 138 aa20.05■□□□□ 0.8
CPSF7-204ENST00000413232 DHTKD1Q96HY7 919 aaPredicted RBP20.05■□□□□ 0.8
CPSF7-204ENST00000413232 SCNM1Q9BWG6 230 aa20.05■□□□□ 0.8
CPSF7-204ENST00000413232 GPR174Q9BXC1 333 aa20.05■□□□□ 0.8
CPSF7-204ENST00000413232 METTL14Q9HCE5 456 aaKnown RBP20.05■□□□□ 0.8
CPSF7-204ENST00000413232 CNGB3Q9NQW8 809 aa20.05■□□□□ 0.8
CPSF7-204ENST00000413232 ABCC13Q9NSE7 274 aa20.05■□□□□ 0.8
CPSF7-204ENST00000413232 KIAA1257Q9ULG3 409 aa20.05■□□□□ 0.8
CPSF7-204ENST00000413232 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.05■□□□□ 0.8
CPSF7-204ENST00000413232 TMEM131Q92545 1883 aa20.05■□□□□ 0.8
CPSF7-204ENST00000413232 GOLGA6L7A0A1B0GV03 622 aa20.04■□□□□ 0.8
CPSF7-204ENST00000413232 UPK3BL1B0FP48 263 aa20.04■□□□□ 0.8
CPSF7-204ENST00000413232 UPK3BL2E5RIL1 263 aa20.04■□□□□ 0.8
CPSF7-204ENST00000413232 PSMA7O14818 248 aa20.04■□□□□ 0.8
CPSF7-204ENST00000413232 NPC1O15118 1278 aa20.04■□□□□ 0.8
CPSF7-204ENST00000413232 PMM2O15305 246 aa20.04■□□□□ 0.8
CPSF7-204ENST00000413232 GJB3O75712 270 aa20.04■□□□□ 0.8
CPSF7-204ENST00000413232 PAEPP09466 180 aa20.04■□□□□ 0.8
CPSF7-204ENST00000413232 HARS2P49590 506 aaKnown RBP20.04■□□□□ 0.8
CPSF7-204ENST00000413232 ATXN3P54252 364 aaPredicted RBP20.04■□□□□ 0.8
CPSF7-204ENST00000413232 CNGA2Q16280 664 aa20.04■□□□□ 0.8
CPSF7-204ENST00000413232 ADGRF1Q5T601 910 aa20.04■□□□□ 0.8
CPSF7-204ENST00000413232 MSANTD2Q6P1R3 559 aa20.04■□□□□ 0.8
CPSF7-204ENST00000413232 RRAGAQ7L523 313 aa20.04■□□□□ 0.8
CPSF7-204ENST00000413232 PPM1KQ8N3J5 372 aa20.04■□□□□ 0.8
CPSF7-204ENST00000413232 ZNF366Q8N895 744 aa20.04■□□□□ 0.8
CPSF7-204ENST00000413232 SIPA1Q96FS4 1042 aa20.04■□□□□ 0.8
CPSF7-204ENST00000413232 CEP63Q96MT8 703 aa20.04■□□□□ 0.8
CPSF7-204ENST00000413232 NT5C1BQ96P26 610 aa20.04■□□□□ 0.8
CPSF7-204ENST00000413232 SYNCRIPO60506 623 aaKnown RBP20.03■□□□□ 0.8
CPSF7-204ENST00000413232 IGLV3-27P01718 113 aa20.03■□□□□ 0.8
CPSF7-204ENST00000413232 EPHX1P07099 455 aa20.03■□□□□ 0.8
CPSF7-204ENST00000413232 PROS1P07225 676 aa20.03■□□□□ 0.8
CPSF7-204ENST00000413232 SLC6A4P31645 630 aa20.03■□□□□ 0.8
CPSF7-204ENST00000413232 ZNF132P52740 706 aa20.03■□□□□ 0.8
CPSF7-204ENST00000413232 EIF4HQ15056 248 aaKnown RBP20.03■□□□□ 0.8
CPSF7-204ENST00000413232 PLEKHG6Q3KR16 790 aa20.03■□□□□ 0.8
CPSF7-204ENST00000413232 CCDC40Q4G0X9 1142 aa20.03■□□□□ 0.8
CPSF7-204ENST00000413232 RFWD3Q6PCD5 774 aa20.03■□□□□ 0.8
CPSF7-204ENST00000413232 KIAA0907Q7Z7F0 614 aaPredicted RBP20.03■□□□□ 0.8
CPSF7-204ENST00000413232 ADIPOR2Q86V24 386 aa20.03■□□□□ 0.8
CPSF7-204ENST00000413232 DNASE2BQ8WZ79 361 aa20.03■□□□□ 0.8
CPSF7-204ENST00000413232 TMA16Q96EY4 203 aaKnown RBP20.03■□□□□ 0.8
CPSF7-204ENST00000413232 MYEOVQ96EZ4 313 aa20.03■□□□□ 0.8
CPSF7-204ENST00000413232 CAMK1GQ96NX5 476 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms