RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 ANO4Q32M45 955 aa13.69□□□□□ -0.22
HDAC8-210ENST00000412342 ZC3H12AQ5D1E8 599 aaKnown RBP13.69□□□□□ -0.22
HDAC8-210ENST00000412342 PPP1R15BQ5SWA1 713 aa13.69□□□□□ -0.22
HDAC8-210ENST00000412342 ADGRF1Q5T601 910 aa13.69□□□□□ -0.22
HDAC8-210ENST00000412342 PKN3Q6P5Z2 889 aa13.69□□□□□ -0.22
HDAC8-210ENST00000412342 MAMSTRQ6ZN01 415 aa13.69□□□□□ -0.22
HDAC8-210ENST00000412342 PHLDB2Q86SQ0 1253 aa13.69□□□□□ -0.22
HDAC8-210ENST00000412342 UNC45BQ8IWX7 931 aa13.69□□□□□ -0.22
HDAC8-210ENST00000412342 MCOLN2Q8IZK6 566 aa13.69□□□□□ -0.22
HDAC8-210ENST00000412342 MAML2Q8IZL2 1156 aaPredicted RBP13.69□□□□□ -0.22
HDAC8-210ENST00000412342 EMC1Q8N766 993 aa13.69□□□□□ -0.22
HDAC8-210ENST00000412342 C3orf20Q8ND61 904 aa13.69□□□□□ -0.22
HDAC8-210ENST00000412342 JOSD2Q8TAC2 188 aa13.69□□□□□ -0.22
HDAC8-210ENST00000412342 MYEOVQ96EZ4 313 aa13.69□□□□□ -0.22
HDAC8-210ENST00000412342 PGAP3Q96FM1 320 aaPredicted RBP13.69□□□□□ -0.22
HDAC8-210ENST00000412342 BBS2Q9BXC9 721 aa13.69□□□□□ -0.22
HDAC8-210ENST00000412342 FAM204AQ9H8W3 233 aa13.69□□□□□ -0.22
HDAC8-210ENST00000412342 SEPT11Q9NVA2 429 aaKnown RBP13.69□□□□□ -0.22
HDAC8-210ENST00000412342 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.69□□□□□ -0.22
HDAC8-210ENST00000412342 WDR35Q9P2L0 1181 aa13.69□□□□□ -0.22
HDAC8-210ENST00000412342 XPO7Q9UIA9 1087 aaKnown RBP13.69□□□□□ -0.22
HDAC8-210ENST00000412342 ATG2BQ96BY7 2078 aa13.68□□□□□ -0.22
HDAC8-210ENST00000412342 GOLGA6L7A0A1B0GV03 622 aa13.68□□□□□ -0.22
HDAC8-210ENST00000412342 I6L893 689 aaPredicted RBP13.68□□□□□ -0.22
HDAC8-210ENST00000412342 K7EQS6 105 aa13.68□□□□□ -0.22
HDAC8-210ENST00000412342 SERPING1P05155 500 aa13.68□□□□□ -0.22
HDAC8-210ENST00000412342 CISD3P0C7P0 127 aa13.68□□□□□ -0.22
HDAC8-210ENST00000412342 GZMAP12544 262 aa13.68□□□□□ -0.22
HDAC8-210ENST00000412342 COL9A1P20849 921 aa13.68□□□□□ -0.22
HDAC8-210ENST00000412342 RNASE9P60153 205 aaKnown RBP13.68□□□□□ -0.22
HDAC8-210ENST00000412342 GRSF1Q12849 480 aaKnown RBP eCLIP13.68□□□□□ -0.22
HDAC8-210ENST00000412342 MTAPQ13126 283 aa13.68□□□□□ -0.22
HDAC8-210ENST00000412342 TRIM14Q14142 442 aa13.68□□□□□ -0.22
HDAC8-210ENST00000412342 PPP2R5DQ14738 602 aa13.68□□□□□ -0.22
HDAC8-210ENST00000412342 SLC25A52Q3SY17 297 aa13.68□□□□□ -0.22
HDAC8-210ENST00000412342 WDR59Q6PJI9 974 aa13.68□□□□□ -0.22
HDAC8-210ENST00000412342 DNAAF5Q86Y56 855 aa13.68□□□□□ -0.22
HDAC8-210ENST00000412342 SYNPOQ8N3V7 929 aa13.68□□□□□ -0.22
HDAC8-210ENST00000412342 NAT16Q8N8M0 369 aa13.68□□□□□ -0.22
HDAC8-210ENST00000412342 PRICKLE1Q96MT3 831 aaPredicted RBP13.68□□□□□ -0.22
HDAC8-210ENST00000412342 PNKPQ96T60 521 aa13.68□□□□□ -0.22
HDAC8-210ENST00000412342 TBCBQ99426 244 aa13.68□□□□□ -0.22
HDAC8-210ENST00000412342 DNAJC7Q99615 494 aa13.68□□□□□ -0.22
HDAC8-210ENST00000412342 PRMT1Q99873 361 aaKnown RBP13.68□□□□□ -0.22
HDAC8-210ENST00000412342 IER2Q9BTL4 223 aa13.68□□□□□ -0.22
HDAC8-210ENST00000412342 KCNH6Q9H252 994 aa13.68□□□□□ -0.22
HDAC8-210ENST00000412342 ANLNQ9NQW6 1124 aa13.68□□□□□ -0.22
HDAC8-210ENST00000412342 PIGVQ9NUD9 493 aa13.68□□□□□ -0.22
HDAC8-210ENST00000412342 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.68□□□□□ -0.22
HDAC8-210ENST00000412342 C2orf42Q9NWW7 574 aa13.68□□□□□ -0.22
HDAC8-210ENST00000412342 DDIT4Q9NX09 232 aa13.68□□□□□ -0.22
HDAC8-210ENST00000412342 RRN3Q9NYV6 651 aa13.68□□□□□ -0.22
HDAC8-210ENST00000412342 PLK2Q9NYY3 685 aa13.68□□□□□ -0.22
HDAC8-210ENST00000412342 ARHGAP20Q9P2F6 1191 aa13.68□□□□□ -0.22
HDAC8-210ENST00000412342 CLEC4EQ9ULY5 219 aa13.68□□□□□ -0.22
HDAC8-210ENST00000412342 NENFQ9UMX5 172 aa13.68□□□□□ -0.22
HDAC8-210ENST00000412342 MUC22E2RYF6 1773 aaPredicted RBP13.68□□□□□ -0.22
HDAC8-210ENST00000412342 FANCMQ8IYD8 2048 aa13.68□□□□□ -0.22
HDAC8-210ENST00000412342 C2CD4BA6NLJ0 364 aa13.67□□□□□ -0.22
HDAC8-210ENST00000412342 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.67□□□□□ -0.22
HDAC8-210ENST00000412342 M0QYT0 321 aa13.67□□□□□ -0.22
HDAC8-210ENST00000412342 RNF40O75150 1001 aa13.67□□□□□ -0.22
HDAC8-210ENST00000412342 ENDOD1O94919 500 aa13.67□□□□□ -0.22
HDAC8-210ENST00000412342 KAT7O95251 611 aa13.67□□□□□ -0.22
HDAC8-210ENST00000412342 RRM1P23921 792 aa13.67□□□□□ -0.22
HDAC8-210ENST00000412342 HOXD9P28356 352 aaPredicted RBP13.67□□□□□ -0.22
HDAC8-210ENST00000412342 CXCR3P49682 368 aa13.67□□□□□ -0.22
HDAC8-210ENST00000412342 SULT1E1P49888 294 aa13.67□□□□□ -0.22
HDAC8-210ENST00000412342 ATXN1P54253 815 aaKnown RBP13.67□□□□□ -0.22
HDAC8-210ENST00000412342 KDSRQ06136 332 aa13.67□□□□□ -0.22
HDAC8-210ENST00000412342 PIK3R6Q5UE93 754 aa13.67□□□□□ -0.22
HDAC8-210ENST00000412342 RFWD3Q6PCD5 774 aa13.67□□□□□ -0.22
HDAC8-210ENST00000412342 TERB1Q8NA31 727 aa13.67□□□□□ -0.22
HDAC8-210ENST00000412342 BHMTQ93088 406 aa13.67□□□□□ -0.22
HDAC8-210ENST00000412342 EXOC4Q96A65 974 aa13.67□□□□□ -0.22
HDAC8-210ENST00000412342 VCPIP1Q96JH7 1222 aa13.67□□□□□ -0.22
HDAC8-210ENST00000412342 CFAP57Q96MR6 1250 aa13.67□□□□□ -0.22
HDAC8-210ENST00000412342 IRX2Q9BZI1 471 aaPredicted RBP13.67□□□□□ -0.22
HDAC8-210ENST00000412342 PRMT8Q9NR22 394 aaPredicted RBP13.67□□□□□ -0.22
HDAC8-210ENST00000412342 ARHGEF4Q9NR80 690 aa13.67□□□□□ -0.22
HDAC8-210ENST00000412342 HCN2Q9UL51 889 aa13.67□□□□□ -0.22
HDAC8-210ENST00000412342 STAP1Q9ULZ2 295 aa13.67□□□□□ -0.22
HDAC8-210ENST00000412342 BZW2Q9Y6E2 419 aaKnown RBP13.67□□□□□ -0.22
HDAC8-210ENST00000412342 CACNA1HO95180 2353 aa13.66□□□□□ -0.22
HDAC8-210ENST00000412342 SYNJ2BP-COX16A0A087WUM0 186 aa13.66□□□□□ -0.22
HDAC8-210ENST00000412342 SIGLEC16A6NMB1 481 aa13.66□□□□□ -0.22
HDAC8-210ENST00000412342 TMCO5BA8MYB1 307 aa13.66□□□□□ -0.22
HDAC8-210ENST00000412342 CHURC1-FNTBB4DL54 471 aa13.66□□□□□ -0.22
HDAC8-210ENST00000412342 TSPAN3O60637 253 aa13.66□□□□□ -0.22
HDAC8-210ENST00000412342 MFAP3LO75121 409 aa13.66□□□□□ -0.22
HDAC8-210ENST00000412342 MOCS2O96007 188 aaPredicted RBP13.66□□□□□ -0.22
HDAC8-210ENST00000412342 APOEP02649 317 aa13.66□□□□□ -0.22
HDAC8-210ENST00000412342 TDGF1P13385 188 aa13.66□□□□□ -0.22
HDAC8-210ENST00000412342 CCR1P32246 355 aa13.66□□□□□ -0.22
HDAC8-210ENST00000412342 GBP1P32455 592 aa13.66□□□□□ -0.22
HDAC8-210ENST00000412342 RFC1P35251 1148 aaPredicted RBP13.66□□□□□ -0.22
HDAC8-210ENST00000412342 GRIA2P42262 883 aa13.66□□□□□ -0.22
HDAC8-210ENST00000412342 PTPN9P43378 593 aa13.66□□□□□ -0.22
HDAC8-210ENST00000412342 SLC11A2P49281 568 aa13.66□□□□□ -0.22
HDAC8-210ENST00000412342 ZNF75DP51815 510 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms