RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 ARHGAP8P85298 464 aa18.43■□□□□ 0.54
LSM5-204ENST00000409909 PTK2Q05397 1052 aa18.43■□□□□ 0.54
LSM5-204ENST00000409909 PUM1Q14671 1186 aaKnown RBP eCLIP18.43■□□□□ 0.54
LSM5-204ENST00000409909 SF3A2Q15428 464 aaKnown RBP18.43■□□□□ 0.54
LSM5-204ENST00000409909 ELF2Q15723 593 aa18.43■□□□□ 0.54
LSM5-204ENST00000409909 MAP7D1Q3KQU3 841 aa18.43■□□□□ 0.54
LSM5-204ENST00000409909 FAM133BQ5BKY9 247 aaKnown RBP18.43■□□□□ 0.54
LSM5-204ENST00000409909 KLHDC7AQ5VTJ3 777 aa18.43■□□□□ 0.54
LSM5-204ENST00000409909 CDKAL1Q5VV42 579 aa18.43■□□□□ 0.54
LSM5-204ENST00000409909 PMS2CLQ68D20 193 aa18.43■□□□□ 0.54
LSM5-204ENST00000409909 TMEM215Q68D42 235 aa18.43■□□□□ 0.54
LSM5-204ENST00000409909 SMYD5Q6GMV2 418 aa18.43■□□□□ 0.54
LSM5-204ENST00000409909 NADSYN1Q6IA69 706 aa18.43■□□□□ 0.54
LSM5-204ENST00000409909 SDE2Q6IQ49 451 aa18.43■□□□□ 0.54
LSM5-204ENST00000409909 RFWD3Q6PCD5 774 aa18.43■□□□□ 0.54
LSM5-204ENST00000409909 BEND5Q7L4P6 421 aa18.43■□□□□ 0.54
LSM5-204ENST00000409909 PASD1Q8IV76 773 aa18.43■□□□□ 0.54
LSM5-204ENST00000409909 UNC45BQ8IWX7 931 aa18.43■□□□□ 0.54
LSM5-204ENST00000409909 FAM71AQ8IYT1 594 aa18.43■□□□□ 0.54
LSM5-204ENST00000409909 TMA16Q96EY4 203 aaKnown RBP18.43■□□□□ 0.54
LSM5-204ENST00000409909 CPXM1Q96SM3 734 aa18.43■□□□□ 0.54
LSM5-204ENST00000409909 LHX5Q9H2C1 402 aa18.43■□□□□ 0.54
LSM5-204ENST00000409909 SMOC1Q9H4F8 434 aa18.43■□□□□ 0.54
LSM5-204ENST00000409909 TAB2Q9NYJ8 693 aa18.43■□□□□ 0.54
LSM5-204ENST00000409909 MBD1Q9UIS9 605 aaPredicted RBP18.43■□□□□ 0.54
LSM5-204ENST00000409909 FHOD1Q9Y613 1164 aa18.43■□□□□ 0.54
LSM5-204ENST00000409909 RAD54BQ9Y620 910 aa18.43■□□□□ 0.54
LSM5-204ENST00000409909 PES1O00541 588 aaKnown RBP18.42■□□□□ 0.54
LSM5-204ENST00000409909 GDF9O60383 454 aa18.42■□□□□ 0.54
LSM5-204ENST00000409909 ZNF806P0C7X5 589 aa18.42■□□□□ 0.54
LSM5-204ENST00000409909 PIK3R6Q5UE93 754 aa18.42■□□□□ 0.54
LSM5-204ENST00000409909 NUGGCQ68CJ6 796 aa18.42■□□□□ 0.54
LSM5-204ENST00000409909 ANKS1BQ7Z6G8 1248 aa18.42■□□□□ 0.54
LSM5-204ENST00000409909 TAC4Q86UU9 113 aa18.42■□□□□ 0.54
LSM5-204ENST00000409909 PGBD3Q8N328 593 aa18.42■□□□□ 0.54
LSM5-204ENST00000409909 IPO4Q8TEX9 1081 aaKnown RBP18.42■□□□□ 0.54
LSM5-204ENST00000409909 SORCS1Q8WY21 1168 aa18.42■□□□□ 0.54
LSM5-204ENST00000409909 AZIN2Q96A70 460 aa18.42■□□□□ 0.54
LSM5-204ENST00000409909 SLC39A13Q96H72 371 aa18.42■□□□□ 0.54
LSM5-204ENST00000409909 PPP1R13BQ96KQ4 1090 aa18.42■□□□□ 0.54
LSM5-204ENST00000409909 NAA15Q9BXJ9 866 aaKnown RBP18.42■□□□□ 0.54
LSM5-204ENST00000409909 ELOVL2Q9NXB9 296 aa18.42■□□□□ 0.54
LSM5-204ENST00000409909 THAP10Q9P2Z0 257 aaPredicted RBP18.42■□□□□ 0.54
LSM5-204ENST00000409909 TLR6Q9Y2C9 796 aa18.42■□□□□ 0.54
LSM5-204ENST00000409909 PCDHGA5Q9Y5G8 931 aa18.42■□□□□ 0.54
LSM5-204ENST00000409909 STON1Q9Y6Q2 735 aa18.42■□□□□ 0.54
LSM5-204ENST00000409909 GON4LQ3T8J9 2241 aa18.42■□□□□ 0.54
LSM5-204ENST00000409909 ACSL4O60488 711 aa18.41■□□□□ 0.54
LSM5-204ENST00000409909 HLA-FP30511 346 aa18.41■□□□□ 0.54
LSM5-204ENST00000409909 MPLP40238 635 aa18.41■□□□□ 0.54
LSM5-204ENST00000409909 SLC11A2P49281 568 aa18.41■□□□□ 0.54
LSM5-204ENST00000409909 ATXN1P54253 815 aaKnown RBP18.41■□□□□ 0.54
LSM5-204ENST00000409909 ZNF445P59923 1031 aa18.41■□□□□ 0.54
LSM5-204ENST00000409909 YWHAZP63104 245 aaKnown RBP18.41■□□□□ 0.54
LSM5-204ENST00000409909 PITX1P78337 314 aaPredicted RBP18.41■□□□□ 0.54
LSM5-204ENST00000409909 ENPP2Q13822 863 aa18.41■□□□□ 0.54
LSM5-204ENST00000409909 RAPGEF1Q13905 1077 aa18.41■□□□□ 0.54
LSM5-204ENST00000409909 DRAP1Q14919 205 aaPredicted RBP18.41■□□□□ 0.54
LSM5-204ENST00000409909 RNF43Q68DV7 783 aa18.41■□□□□ 0.54
LSM5-204ENST00000409909 C11orf57Q6ZUT1 292 aaPredicted RBP18.41■□□□□ 0.54
LSM5-204ENST00000409909 C11orf74Q86VG3 221 aa18.41■□□□□ 0.54
LSM5-204ENST00000409909 C1orf131Q8NDD1 294 aaKnown RBP18.41■□□□□ 0.54
LSM5-204ENST00000409909 MYEOVQ96EZ4 313 aa18.41■□□□□ 0.54
LSM5-204ENST00000409909 SERPINB11Q96P15 392 aa18.41■□□□□ 0.54
LSM5-204ENST00000409909 SLC6A17Q9H1V8 727 aa18.41■□□□□ 0.54
LSM5-204ENST00000409909 POPDC2Q9HBU9 364 aa18.41■□□□□ 0.54
LSM5-204ENST00000409909 PLCB1Q9NQ66 1216 aa18.41■□□□□ 0.54
LSM5-204ENST00000409909 RXFP3Q9NSD7 469 aa18.41■□□□□ 0.54
LSM5-204ENST00000409909 FANCLQ9NW38 375 aa18.41■□□□□ 0.54
LSM5-204ENST00000409909 CALCOCO1Q9P1Z2 691 aa18.41■□□□□ 0.54
LSM5-204ENST00000409909 SPTBN2O15020 2390 aa18.41■□□□□ 0.54
LSM5-204ENST00000409909 PLXND1Q9Y4D7 1925 aa18.41■□□□□ 0.54
LSM5-204ENST00000409909 NUP205Q92621 2012 aa18.4■□□□□ 0.54
LSM5-204ENST00000409909 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.4■□□□□ 0.54
LSM5-204ENST00000409909 BCLAF3A2AJT9 711 aaKnown RBP18.4■□□□□ 0.54
LSM5-204ENST00000409909 GOLGA6L22H0YM25 854 aa18.4■□□□□ 0.54
LSM5-204ENST00000409909 CAPN9O14815 690 aa18.4■□□□□ 0.54
LSM5-204ENST00000409909 IGLV3-25P01717 112 aa18.4■□□□□ 0.54
LSM5-204ENST00000409909 UCHL3P15374 230 aa18.4■□□□□ 0.54
LSM5-204ENST00000409909 NDUFV2P19404 249 aa18.4■□□□□ 0.54
LSM5-204ENST00000409909 KRT9P35527 623 aa18.4■□□□□ 0.54
LSM5-204ENST00000409909 IL12RB1P42701 662 aa18.4■□□□□ 0.54
LSM5-204ENST00000409909 CREB5Q02930 508 aa18.4■□□□□ 0.54
LSM5-204ENST00000409909 NNTQ13423 1086 aa18.4■□□□□ 0.54
LSM5-204ENST00000409909 KRT31Q15323 416 aa18.4■□□□□ 0.54
LSM5-204ENST00000409909 WFDC5Q8TCV5 224 aa18.4■□□□□ 0.54
LSM5-204ENST00000409909 TRIM62Q9BVG3 475 aa18.4■□□□□ 0.54
LSM5-204ENST00000409909 LSM14BQ9BX40 385 aaKnown RBP18.4■□□□□ 0.54
LSM5-204ENST00000409909 VPS16Q9H269 839 aa18.4■□□□□ 0.54
LSM5-204ENST00000409909 XPO7Q9UIA9 1087 aaKnown RBP18.4■□□□□ 0.54
LSM5-204ENST00000409909 CDV3Q9UKY7 258 aaKnown RBP18.4■□□□□ 0.54
LSM5-204ENST00000409909 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.39■□□□□ 0.53
LSM5-204ENST00000409909 TBL1XO60907 577 aa18.39■□□□□ 0.53
LSM5-204ENST00000409909 TRUB2O95900 331 aaKnown RBP18.39■□□□□ 0.53
LSM5-204ENST00000409909 ERBB2P04626 1255 aa18.39■□□□□ 0.53
LSM5-204ENST00000409909 EIF4EBP2Q13542 120 aaPredicted RBP18.39■□□□□ 0.53
LSM5-204ENST00000409909 ZNF234Q14588 700 aa18.39■□□□□ 0.53
LSM5-204ENST00000409909 EIF4HQ15056 248 aaKnown RBP18.39■□□□□ 0.53
LSM5-204ENST00000409909 ZC3H12AQ5D1E8 599 aaKnown RBP18.39■□□□□ 0.53
LSM5-204ENST00000409909 MPP7Q5T2T1 576 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 370.4 ms