RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 TRIM31Q9BZY9 425 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 ZBP1Q9H171 429 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 RXFP1Q9HBX9 757 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 ARHGEF4Q9NR80 690 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 AAASQ9NRG9 546 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 GMIPQ9P107 970 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 ZNF148Q9UQR1 794 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 SLC27A5Q9Y2P5 690 aa5.72□□□□□ -1.49
EPHA4-202ENST00000409854 BCLAF3A2AJT9 711 aaKnown RBP5.71□□□□□ -1.49
EPHA4-202ENST00000409854 CFAP69A5D8W1 941 aa5.71□□□□□ -1.49
EPHA4-202ENST00000409854 SLC38A8A6NNN8 435 aa5.71□□□□□ -1.49
EPHA4-202ENST00000409854 KCNU1A8MYU2 1149 aa5.71□□□□□ -1.49
EPHA4-202ENST00000409854 DNALI1O14645 258 aaPredicted RBP5.71□□□□□ -1.49
EPHA4-202ENST00000409854 DCLK1O15075 740 aa5.71□□□□□ -1.49
EPHA4-202ENST00000409854 SOAT2O75908 522 aa5.71□□□□□ -1.49
EPHA4-202ENST00000409854 RBP3P10745 1247 aa5.71□□□□□ -1.49
EPHA4-202ENST00000409854 ATF2P15336 505 aa5.71□□□□□ -1.49
EPHA4-202ENST00000409854 RPL17P18621 184 aaKnown RBP5.71□□□□□ -1.49
EPHA4-202ENST00000409854 HOXC13P31276 330 aa5.71□□□□□ -1.49
EPHA4-202ENST00000409854 HTR7P34969 479 aa5.71□□□□□ -1.49
EPHA4-202ENST00000409854 OR1D2P34982 312 aa5.71□□□□□ -1.49
EPHA4-202ENST00000409854 TNNT3P45378 269 aaPredicted RBP5.71□□□□□ -1.49
EPHA4-202ENST00000409854 TUFMP49411 452 aaKnown RBP5.71□□□□□ -1.49
EPHA4-202ENST00000409854 GDF10P55107 478 aa5.71□□□□□ -1.49
EPHA4-202ENST00000409854 ARPP19P56211 112 aa5.71□□□□□ -1.49
EPHA4-202ENST00000409854 CREMQ03060 361 aa5.71□□□□□ -1.49
EPHA4-202ENST00000409854 DUSP4Q13115 394 aa5.71□□□□□ -1.49
EPHA4-202ENST00000409854 MGAT5BQ3V5L5 792 aa5.71□□□□□ -1.49
EPHA4-202ENST00000409854 SPOUT1Q5T280 376 aaKnown RBP5.71□□□□□ -1.49
EPHA4-202ENST00000409854 RASIP1Q5U651 963 aa5.71□□□□□ -1.49
EPHA4-202ENST00000409854 MANEALQ5VSG8 457 aa5.71□□□□□ -1.49
EPHA4-202ENST00000409854 HIBCHQ6NVY1 386 aaPredicted RBP5.71□□□□□ -1.49
EPHA4-202ENST00000409854 FAM117BQ6P1L5 589 aa5.71□□□□□ -1.49
EPHA4-202ENST00000409854 STKLD1Q8NE28 680 aa5.71□□□□□ -1.49
EPHA4-202ENST00000409854 PHOSPHO2Q8TCD6 241 aa5.71□□□□□ -1.49
EPHA4-202ENST00000409854 LRRC45Q96CN5 670 aa5.71□□□□□ -1.49
EPHA4-202ENST00000409854 SLC39A13Q96H72 371 aa5.71□□□□□ -1.49
EPHA4-202ENST00000409854 SERPINB11Q96P15 392 aa5.71□□□□□ -1.49
EPHA4-202ENST00000409854 HAPLN3Q96S86 360 aa5.71□□□□□ -1.49
EPHA4-202ENST00000409854 SEPT5Q99719 369 aaPredicted RBP5.71□□□□□ -1.49
EPHA4-202ENST00000409854 TMEM121Q9BTD3 319 aa5.71□□□□□ -1.49
EPHA4-202ENST00000409854 ADAM7Q9H2U9 754 aa5.71□□□□□ -1.49
EPHA4-202ENST00000409854 WDCPQ9H6R7 721 aa5.71□□□□□ -1.49
EPHA4-202ENST00000409854 USP29Q9HBJ7 922 aa5.71□□□□□ -1.49
EPHA4-202ENST00000409854 OLA1Q9NTK5 396 aaKnown RBP5.71□□□□□ -1.49
EPHA4-202ENST00000409854 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.71□□□□□ -1.49
EPHA4-202ENST00000409854 PCDH10Q9P2E7 1040 aa5.71□□□□□ -1.49
EPHA4-202ENST00000409854 PRKAG2Q9UGJ0 569 aa5.71□□□□□ -1.49
EPHA4-202ENST00000409854 ASIC3Q9UHC3 531 aa5.71□□□□□ -1.49
EPHA4-202ENST00000409854 TLR6Q9Y2C9 796 aa5.71□□□□□ -1.49
EPHA4-202ENST00000409854 INSL6Q9Y581 213 aa5.71□□□□□ -1.49
EPHA4-202ENST00000409854 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.71□□□□□ -1.5
EPHA4-202ENST00000409854 SYNJ2BP-COX16A0A087WUM0 186 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 SPDYE4A6NLX3 237 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 FAM72CH0Y354 149 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 NDC80O14777 642 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 SEC24AO95486 1093 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 IGLV3-27P01718 113 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 STIP1P31948 543 aaKnown RBP5.71□□□□□ -1.5
EPHA4-202ENST00000409854 PLTPP55058 493 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 SLC10A2Q12908 348 aaPredicted RBP5.71□□□□□ -1.5
EPHA4-202ENST00000409854 CBLBQ13191 982 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 UAP1Q16222 522 aaPredicted RBP5.71□□□□□ -1.5
EPHA4-202ENST00000409854 SWT1Q5T5J6 900 aaKnown RBP5.71□□□□□ -1.5
EPHA4-202ENST00000409854 FAM72AQ5TYM5 149 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 ALS2CLQ60I27 953 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 FAM72DQ6L9T8 149 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 RFX8Q6ZV50 586 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 FAM72BQ86X60 149 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 UNC45BQ8IWX7 931 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 IQCKQ8N0W5 287 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 FIBCD1Q8N539 461 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 FBXO32Q969P5 355 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 TRMT2BQ96GJ1 504 aaKnown RBP5.71□□□□□ -1.5
EPHA4-202ENST00000409854 MYRFLQ96LU7 910 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 GDAP1L1Q96MZ0 367 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 QKIQ96PU8 341 aaKnown RBP eCLIP5.71□□□□□ -1.5
EPHA4-202ENST00000409854 UBE2OQ9C0C9 1292 aaKnown RBP5.71□□□□□ -1.5
EPHA4-202ENST00000409854 TKTL2Q9H0I9 626 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 TLR8Q9NR97 1041 aaKnown RBP5.71□□□□□ -1.5
EPHA4-202ENST00000409854 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.71□□□□□ -1.5
EPHA4-202ENST00000409854 ETNK2Q9NVF9 386 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 OGFRQ9NZT2 677 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 COX16Q9P0S2 106 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 CXXC1Q9P0U4 656 aaPredicted RBP5.71□□□□□ -1.5
EPHA4-202ENST00000409854 PCDHB12Q9Y5F1 795 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 RAD54BQ9Y620 910 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 HACD1B0YJ81 288 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 AGPSO00116 658 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 EEF2KO00418 725 aaKnown RBP5.71□□□□□ -1.5
EPHA4-202ENST00000409854 URODP06132 367 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 CTSAP10619 480 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 ETS1P14921 441 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 AMPD1P23109 780 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 ITGA8P53708 1063 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 GBE1Q04446 702 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 IFRD2Q12894 506 aaPredicted RBP5.71□□□□□ -1.5
EPHA4-202ENST00000409854 TAF10Q12962 218 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 CALCOCO2Q13137 446 aa5.71□□□□□ -1.5
EPHA4-202ENST00000409854 RNASEH2BQ5TBB1 312 aaKnown RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms