RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 TCP11L2Q8N4U5 519 aa5.11□□□□□ -1.59
CLK1-203ENST00000409769 SMCR8Q8TEV9 937 aaPredicted RBP5.11□□□□□ -1.59
CLK1-203ENST00000409769 REPS1Q96D71 796 aa5.11□□□□□ -1.59
CLK1-203ENST00000409769 LTV1Q96GA3 475 aaPredicted RBP5.11□□□□□ -1.59
CLK1-203ENST00000409769 ZDHHC12Q96GR4 267 aa5.11□□□□□ -1.59
CLK1-203ENST00000409769 ZNF668Q96K58 619 aaPredicted RBP5.11□□□□□ -1.59
CLK1-203ENST00000409769 APOL5Q9BWW9 433 aa5.11□□□□□ -1.59
CLK1-203ENST00000409769 STK31Q9BXU1 1019 aa5.11□□□□□ -1.59
CLK1-203ENST00000409769 PNNQ9H307 717 aaKnown RBP5.11□□□□□ -1.59
CLK1-203ENST00000409769 DLL3Q9NYJ7 618 aa5.11□□□□□ -1.59
CLK1-203ENST00000409769 MID2Q9UJV3 735 aa5.11□□□□□ -1.59
CLK1-203ENST00000409769 SNX14Q9Y5W7 946 aa5.11□□□□□ -1.59
CLK1-203ENST00000409769 DISP2A7MBM2 1401 aa5.11□□□□□ -1.59
CLK1-203ENST00000409769 CRB1P82279 1406 aa5.11□□□□□ -1.59
CLK1-203ENST00000409769 BCL9LQ86UU0 1499 aa5.11□□□□□ -1.59
CLK1-203ENST00000409769 MEGF6O75095 1541 aa5.11□□□□□ -1.59
CLK1-203ENST00000409769 SIPA1L3O60292 1781 aaPredicted RBP5.11□□□□□ -1.59
CLK1-203ENST00000409769 SCN11AQ9UI33 1791 aa5.11□□□□□ -1.59
CLK1-203ENST00000409769 QSOX1O00391 747 aa5.1□□□□□ -1.59
CLK1-203ENST00000409769 DLDP09622 509 aaKnown RBP5.1□□□□□ -1.59
CLK1-203ENST00000409769 TSHRP16473 764 aa5.1□□□□□ -1.59
CLK1-203ENST00000409769 EPHA3P29320 983 aa5.1□□□□□ -1.59
CLK1-203ENST00000409769 PTDSS1P48651 473 aaKnown RBP5.1□□□□□ -1.59
CLK1-203ENST00000409769 CCT4P50991 539 aaKnown RBP5.1□□□□□ -1.59
CLK1-203ENST00000409769 LAMB3Q13751 1172 aa5.1□□□□□ -1.59
CLK1-203ENST00000409769 KLF9Q13886 244 aaPredicted RBP5.1□□□□□ -1.59
CLK1-203ENST00000409769 PTCHD3Q3KNS1 767 aa5.1□□□□□ -1.59
CLK1-203ENST00000409769 PLAG1Q6DJT9 500 aa5.1□□□□□ -1.59
CLK1-203ENST00000409769 SLC18B1Q6NT16 456 aa5.1□□□□□ -1.59
CLK1-203ENST00000409769 MZT2AQ6P582 158 aa5.1□□□□□ -1.59
CLK1-203ENST00000409769 RAB11FIP4Q86YS3 637 aa5.1□□□□□ -1.59
CLK1-203ENST00000409769 CCAR1Q8IX12 1150 aaKnown RBP5.1□□□□□ -1.59
CLK1-203ENST00000409769 ATP11CQ8NB49 1132 aa5.1□□□□□ -1.59
CLK1-203ENST00000409769 ZNF48Q96MX3 618 aaPredicted RBP5.1□□□□□ -1.59
CLK1-203ENST00000409769 THAP7Q9BT49 309 aaPredicted RBP5.1□□□□□ -1.59
CLK1-203ENST00000409769 FSD1LQ9BXM9 530 aa5.1□□□□□ -1.59
CLK1-203ENST00000409769 GBA2Q9HCG7 927 aaPredicted RBP5.1□□□□□ -1.59
CLK1-203ENST00000409769 STARD7Q9NQZ5 370 aa5.1□□□□□ -1.59
CLK1-203ENST00000409769 DUSP22Q9NRW4 184 aa5.1□□□□□ -1.59
CLK1-203ENST00000409769 SNX13Q9Y5W8 968 aa5.1□□□□□ -1.59
CLK1-203ENST00000409769 THSD7AQ9UPZ6 1657 aa5.09□□□□□ -1.59
CLK1-203ENST00000409769 OVOS2A0A0G2JMS6 1433 aa5.09□□□□□ -1.59
CLK1-203ENST00000409769 MAPK8IP3Q9UPT6 1336 aa5.09□□□□□ -1.59
CLK1-203ENST00000409769 A0A1W2PPC4 97 aa5.09□□□□□ -1.59
CLK1-203ENST00000409769 H0YIZ8 118 aa5.09□□□□□ -1.59
CLK1-203ENST00000409769 H7C4K7 107 aa5.09□□□□□ -1.59
CLK1-203ENST00000409769 THAP12O43422 761 aa5.09□□□□□ -1.59
CLK1-203ENST00000409769 KCNQ3O43525 872 aa5.09□□□□□ -1.59
CLK1-203ENST00000409769 PARP1P09874 1014 aaKnown RBP5.09□□□□□ -1.59
CLK1-203ENST00000409769 ADORA2AP29274 412 aa5.09□□□□□ -1.59
CLK1-203ENST00000409769 PRKAR1BP31321 381 aa5.09□□□□□ -1.59
CLK1-203ENST00000409769 UQCRC1P31930 480 aa5.09□□□□□ -1.59
CLK1-203ENST00000409769 PLCD1P51178 756 aa5.09□□□□□ -1.59
CLK1-203ENST00000409769 CLCN2P51788 898 aa5.09□□□□□ -1.59
CLK1-203ENST00000409769 EEFSECP57772 596 aaKnown RBP5.09□□□□□ -1.59
CLK1-203ENST00000409769 TIRAPP58753 221 aa5.09□□□□□ -1.59
CLK1-203ENST00000409769 ETFDHQ16134 617 aa5.09□□□□□ -1.59
CLK1-203ENST00000409769 MTHFSDQ2M296 383 aaKnown RBP5.09□□□□□ -1.59
CLK1-203ENST00000409769 TBC1D25Q3MII6 688 aa5.09□□□□□ -1.59
CLK1-203ENST00000409769 DEPDC1Q5TB30 811 aa5.09□□□□□ -1.59
CLK1-203ENST00000409769 ZNF66Q6ZN08 573 aa5.09□□□□□ -1.59
CLK1-203ENST00000409769 CATSPERGQ6ZRH7 1159 aa5.09□□□□□ -1.59
CLK1-203ENST00000409769 Q6ZWC4 215 aa5.09□□□□□ -1.59
CLK1-203ENST00000409769 DNAJB14Q8TBM8 379 aa5.09□□□□□ -1.59
CLK1-203ENST00000409769 BRI3BPQ8WY22 251 aa5.09□□□□□ -1.59
CLK1-203ENST00000409769 ZBTB9Q96C00 473 aa5.09□□□□□ -1.59
CLK1-203ENST00000409769 IQCDQ96DY2 449 aa5.09□□□□□ -1.59
CLK1-203ENST00000409769 C17orf80Q9BSJ5 609 aa5.09□□□□□ -1.59
CLK1-203ENST00000409769 ZCWPW1Q9H0M4 648 aa5.09□□□□□ -1.59
CLK1-203ENST00000409769 ZNF700Q9H0M5 742 aa5.09□□□□□ -1.59
CLK1-203ENST00000409769 MYO1AQ9UBC5 1043 aa5.09□□□□□ -1.59
CLK1-203ENST00000409769 ZNF212Q9UDV6 495 aa5.09□□□□□ -1.59
CLK1-203ENST00000409769 HDAC9Q9UKV0 1011 aa5.09□□□□□ -1.59
CLK1-203ENST00000409769 CORO2BQ9UQ03 480 aa5.09□□□□□ -1.59
CLK1-203ENST00000409769 FAM50BQ9Y247 325 aa5.09□□□□□ -1.59
CLK1-203ENST00000409769 RRP7AQ9Y3A4 280 aaKnown RBP5.09□□□□□ -1.59
CLK1-203ENST00000409769 KDM3BQ7LBC6 1761 aa5.09□□□□□ -1.6
CLK1-203ENST00000409769 GLI3P10071 1580 aa5.08□□□□□ -1.6
CLK1-203ENST00000409769 CEMIPQ8WUJ3 1361 aa5.08□□□□□ -1.6
CLK1-203ENST00000409769 SPATA31A1Q5TZJ5 1347 aa5.08□□□□□ -1.6
CLK1-203ENST00000409769 SPATA31A5Q5VU36 1347 aa5.08□□□□□ -1.6
CLK1-203ENST00000409769 SPATA31A7Q8IWB4 1347 aa5.08□□□□□ -1.6
CLK1-203ENST00000409769 TISP43B9A030 160 aa5.08□□□□□ -1.6
CLK1-203ENST00000409769 ZNF213O14771 459 aa5.08□□□□□ -1.6
CLK1-203ENST00000409769 SRGAP2O75044 1071 aa5.08□□□□□ -1.6
CLK1-203ENST00000409769 FESP07332 822 aa5.08□□□□□ -1.6
CLK1-203ENST00000409769 TPH1P17752 444 aa5.08□□□□□ -1.6
CLK1-203ENST00000409769 PRIM2P49643 509 aa5.08□□□□□ -1.6
CLK1-203ENST00000409769 ALDH5A1P51649 535 aaPredicted RBP5.08□□□□□ -1.6
CLK1-203ENST00000409769 TPTEP56180 551 aa5.08□□□□□ -1.6
CLK1-203ENST00000409769 RIPK4P57078 832 aa5.08□□□□□ -1.6
CLK1-203ENST00000409769 USP17L6PQ6QN14 398 aa5.08□□□□□ -1.6
CLK1-203ENST00000409769 KSR2Q6VAB6 950 aa5.08□□□□□ -1.6
CLK1-203ENST00000409769 TOM1L2Q6ZVM7 507 aa5.08□□□□□ -1.6
CLK1-203ENST00000409769 RNF44Q7L0R7 432 aa5.08□□□□□ -1.6
CLK1-203ENST00000409769 KCTD20Q7Z5Y7 419 aa5.08□□□□□ -1.6
CLK1-203ENST00000409769 CAND1Q86VP6 1230 aaKnown RBP5.08□□□□□ -1.6
CLK1-203ENST00000409769 UNC5CLQ8IV45 518 aa5.08□□□□□ -1.6
CLK1-203ENST00000409769 FAM227BQ96M60 508 aa5.08□□□□□ -1.6
CLK1-203ENST00000409769 TMEM79Q9BSE2 394 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms