RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 DNAJC7Q99615 494 aa20.62■□□□□ 0.89
PDLIM2-207ENST00000409417 PRRX2Q99811 253 aa20.62■□□□□ 0.89
PDLIM2-207ENST00000409417 IER2Q9BTL4 223 aa20.62■□□□□ 0.89
PDLIM2-207ENST00000409417 M0QYT0 321 aa20.62■□□□□ 0.89
PDLIM2-207ENST00000409417 GALR2O43603 387 aaPredicted RBP20.62■□□□□ 0.89
PDLIM2-207ENST00000409417 TULP3O75386 442 aa20.62■□□□□ 0.89
PDLIM2-207ENST00000409417 EGFP01133 1207 aa20.62■□□□□ 0.89
PDLIM2-207ENST00000409417 CYBBP04839 570 aa20.62■□□□□ 0.89
PDLIM2-207ENST00000409417 CCR1P32246 355 aa20.62■□□□□ 0.89
PDLIM2-207ENST00000409417 FBXO43Q4G163 708 aa20.62■□□□□ 0.89
PDLIM2-207ENST00000409417 PREPLQ4J6C6 727 aaPredicted RBP20.62■□□□□ 0.89
PDLIM2-207ENST00000409417 OTUD1Q5VV17 481 aaPredicted RBP20.62■□□□□ 0.89
PDLIM2-207ENST00000409417 FYB2Q5VWT5 728 aa20.62■□□□□ 0.89
PDLIM2-207ENST00000409417 BHMTQ93088 406 aa20.62■□□□□ 0.89
PDLIM2-207ENST00000409417 PGAP3Q96FM1 320 aaPredicted RBP20.62■□□□□ 0.89
PDLIM2-207ENST00000409417 P2RY11Q96G91 374 aa20.62■□□□□ 0.89
PDLIM2-207ENST00000409417 BTN2A3PQ96KV6 586 aa20.62■□□□□ 0.89
PDLIM2-207ENST00000409417 XPO6Q96QU8 1125 aaKnown RBP20.62■□□□□ 0.89
PDLIM2-207ENST00000409417 DDX50Q9BQ39 737 aaKnown RBP20.62■□□□□ 0.89
PDLIM2-207ENST00000409417 KCNH6Q9H252 994 aa20.62■□□□□ 0.89
PDLIM2-207ENST00000409417 METTL5Q9NRN9 209 aaKnown RBP20.62■□□□□ 0.89
PDLIM2-207ENST00000409417 DEC1Q9P2X7 70 aa20.62■□□□□ 0.89
PDLIM2-207ENST00000409417 HCN4Q9Y3Q4 1203 aa20.62■□□□□ 0.89
PDLIM2-207ENST00000409417 KMT2EQ8IZD2 1858 aa20.61■□□□□ 0.89
PDLIM2-207ENST00000409417 SYNJ2BP-COX16A0A087WUM0 186 aa20.61■□□□□ 0.89
PDLIM2-207ENST00000409417 A0A0A0MRY4 1105 aa20.61■□□□□ 0.89
PDLIM2-207ENST00000409417 SIGLEC16A6NMB1 481 aa20.61■□□□□ 0.89
PDLIM2-207ENST00000409417 TMCO5BA8MYB1 307 aa20.61■□□□□ 0.89
PDLIM2-207ENST00000409417 KCNU1A8MYU2 1149 aa20.61■□□□□ 0.89
PDLIM2-207ENST00000409417 F9P00740 461 aa20.61■□□□□ 0.89
PDLIM2-207ENST00000409417 KRT3P12035 628 aa20.61■□□□□ 0.89
PDLIM2-207ENST00000409417 GRIA2P42262 883 aa20.61■□□□□ 0.89
PDLIM2-207ENST00000409417 NME3Q13232 169 aa20.61■□□□□ 0.89
PDLIM2-207ENST00000409417 PPP2R5DQ14738 602 aa20.61■□□□□ 0.89
PDLIM2-207ENST00000409417 ARID5BQ14865 1188 aa20.61■□□□□ 0.89
PDLIM2-207ENST00000409417 FAM133BQ5BKY9 247 aaKnown RBP20.61■□□□□ 0.89
PDLIM2-207ENST00000409417 TRNP1Q6NT89 227 aa20.61■□□□□ 0.89
PDLIM2-207ENST00000409417 MAMSTRQ6ZN01 415 aa20.61■□□□□ 0.89
PDLIM2-207ENST00000409417 RNF34Q969K3 372 aa20.61■□□□□ 0.89
PDLIM2-207ENST00000409417 TMA16Q96EY4 203 aaKnown RBP20.61■□□□□ 0.89
PDLIM2-207ENST00000409417 ADAM33Q9BZ11 813 aa20.61■□□□□ 0.89
PDLIM2-207ENST00000409417 IRX2Q9BZI1 471 aaPredicted RBP20.61■□□□□ 0.89
PDLIM2-207ENST00000409417 ARHGEF4Q9NR80 690 aa20.61■□□□□ 0.89
PDLIM2-207ENST00000409417 PIGVQ9NUD9 493 aa20.61■□□□□ 0.89
PDLIM2-207ENST00000409417 PLK2Q9NYY3 685 aa20.61■□□□□ 0.89
PDLIM2-207ENST00000409417 COX16Q9P0S2 106 aa20.61■□□□□ 0.89
PDLIM2-207ENST00000409417 CALCOCO1Q9P1Z2 691 aa20.61■□□□□ 0.89
PDLIM2-207ENST00000409417 ADAMTS1Q9UHI8 967 aa20.61■□□□□ 0.89
PDLIM2-207ENST00000409417 SLC12A6Q9UHW9 1150 aa20.61■□□□□ 0.89
PDLIM2-207ENST00000409417 MIA3Q5JRA6 1907 aa20.61■□□□□ 0.89
PDLIM2-207ENST00000409417 TCRBV5S1A1TA0A578 114 aa20.6■□□□□ 0.89
PDLIM2-207ENST00000409417 KAT7O95251 611 aa20.6■□□□□ 0.89
PDLIM2-207ENST00000409417 MOCS2O96007 188 aaPredicted RBP20.6■□□□□ 0.89
PDLIM2-207ENST00000409417 FTLP02792 175 aaPredicted RBP20.6■□□□□ 0.89
PDLIM2-207ENST00000409417 PLEKP08567 350 aaPredicted RBP20.6■□□□□ 0.89
PDLIM2-207ENST00000409417 TFE3P19532 575 aaPredicted RBP20.6■□□□□ 0.89
PDLIM2-207ENST00000409417 ABCB4P21439 1286 aa20.6■□□□□ 0.89
PDLIM2-207ENST00000409417 SULT1E1P49888 294 aa20.6■□□□□ 0.89
PDLIM2-207ENST00000409417 MESP2Q0VG99 397 aa20.6■□□□□ 0.89
PDLIM2-207ENST00000409417 MTAPQ13126 283 aa20.6■□□□□ 0.89
PDLIM2-207ENST00000409417 MTA1Q13330 715 aa20.6■□□□□ 0.89
PDLIM2-207ENST00000409417 MPPE1Q53F39 396 aa20.6■□□□□ 0.89
PDLIM2-207ENST00000409417 NADSYN1Q6IA69 706 aa20.6■□□□□ 0.89
PDLIM2-207ENST00000409417 C1orf210Q8IVY1 113 aa20.6■□□□□ 0.89
PDLIM2-207ENST00000409417 PHTF2Q8N3S3 785 aa20.6■□□□□ 0.89
PDLIM2-207ENST00000409417 EMC1Q8N766 993 aa20.6■□□□□ 0.89
PDLIM2-207ENST00000409417 CCDC26Q8TAB7 109 aa20.6■□□□□ 0.89
PDLIM2-207ENST00000409417 DDI1Q8WTU0 396 aa20.6■□□□□ 0.89
PDLIM2-207ENST00000409417 EZH1Q92800 747 aaPredicted RBP20.6■□□□□ 0.89
PDLIM2-207ENST00000409417 TBCBQ99426 244 aa20.6■□□□□ 0.89
PDLIM2-207ENST00000409417 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.6■□□□□ 0.89
PDLIM2-207ENST00000409417 DNAJC17Q9NVM6 304 aaKnown RBP20.6■□□□□ 0.89
PDLIM2-207ENST00000409417 FBXO10Q9UK96 956 aa20.6■□□□□ 0.89
PDLIM2-207ENST00000409417 CACNA1IQ9P0X4 2223 aa20.6■□□□□ 0.89
PDLIM2-207ENST00000409417 GOLGA6L7A0A1B0GV03 622 aa20.59■□□□□ 0.89
PDLIM2-207ENST00000409417 C2CD4BA6NLJ0 364 aa20.59■□□□□ 0.89
PDLIM2-207ENST00000409417 RTN2O75298 545 aa20.59■□□□□ 0.89
PDLIM2-207ENST00000409417 APODP05090 189 aa20.59■□□□□ 0.89
PDLIM2-207ENST00000409417 PDGFRAP16234 1089 aa20.59■□□□□ 0.89
PDLIM2-207ENST00000409417 RRM1P23921 792 aa20.59■□□□□ 0.89
PDLIM2-207ENST00000409417 SLC6A4P31645 630 aa20.59■□□□□ 0.89
PDLIM2-207ENST00000409417 CXCR3P49682 368 aa20.59■□□□□ 0.89
PDLIM2-207ENST00000409417 ZNF75DP51815 510 aa20.59■□□□□ 0.89
PDLIM2-207ENST00000409417 TSR1Q2NL82 804 aaKnown RBP20.59■□□□□ 0.89
PDLIM2-207ENST00000409417 MPP7Q5T2T1 576 aa20.59■□□□□ 0.89
PDLIM2-207ENST00000409417 PIK3R6Q5UE93 754 aa20.59■□□□□ 0.89
PDLIM2-207ENST00000409417 DNAJC24Q6P3W2 148 aa20.59■□□□□ 0.89
PDLIM2-207ENST00000409417 RFWD3Q6PCD5 774 aa20.59■□□□□ 0.89
PDLIM2-207ENST00000409417 Q6ZS52 159 aa20.59■□□□□ 0.89
PDLIM2-207ENST00000409417 SND1Q7KZF4 910 aaKnown RBP eCLIP20.59■□□□□ 0.89
PDLIM2-207ENST00000409417 BNIPLQ7Z465 357 aa20.59■□□□□ 0.89
PDLIM2-207ENST00000409417 ATP6V0D2Q8N8Y2 350 aa20.59■□□□□ 0.89
PDLIM2-207ENST00000409417 MRFAP1L1Q96HT8 127 aa20.59■□□□□ 0.89
PDLIM2-207ENST00000409417 CFAP57Q96MR6 1250 aa20.59■□□□□ 0.89
PDLIM2-207ENST00000409417 SELENOOQ9BVL4 669 aa20.59■□□□□ 0.89
PDLIM2-207ENST00000409417 SPATA6Q9NWH7 488 aaPredicted RBP20.59■□□□□ 0.89
PDLIM2-207ENST00000409417 ARHGAP20Q9P2F6 1191 aa20.59■□□□□ 0.89
PDLIM2-207ENST00000409417 XPO7Q9UIA9 1087 aaKnown RBP20.59■□□□□ 0.89
PDLIM2-207ENST00000409417 PAXBP1Q9Y5B6 917 aa20.59■□□□□ 0.89
PDLIM2-207ENST00000409417 K7EQS6 105 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms