RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 CRIPAKQ8N1N5 446 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 DBF4BQ8NFT6 615 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 OR10T2Q8NGX3 314 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 HASPINQ8TF76 798 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 RNF139Q8WU17 664 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 TFB1MQ8WVM0 346 aaKnown RBP6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 LINC01599Q8WXQ3 324 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 FUBP3Q96I24 572 aaKnown RBP eCLIP6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 OXCT2Q9BYC2 517 aaPredicted RBP6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 ADAM33Q9BZ11 813 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 KLC2Q9H0B6 622 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 BRD8Q9H0E9 1235 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 WDCPQ9H6R7 721 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 LRRC4CQ9HCJ2 640 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 RAB6BQ9NRW1 208 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 ABCC13Q9NSE7 274 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 PIGVQ9NUD9 493 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 DNAJC17Q9NVM6 304 aaKnown RBP6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 FETUBQ9UGM5 382 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 SLC12A6Q9UHW9 1150 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 XPO7Q9UIA9 1087 aaKnown RBP6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 LRFN2Q9ULH4 789 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 ZMYND8Q9ULU4 1186 aaPredicted RBP6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 CASP8AP2Q9UKL3 1982 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 MGAMO43451 1857 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 PCNTO95613 3336 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 SF3B1O75533 1304 aaKnown RBP eCLIP6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 OR6C75A6NL08 312 aa6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 SMIM23A6NLE4 172 aa6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 EEF2KO00418 725 aaKnown RBP6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 CREB3O43889 395 aa6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 NBNO60934 754 aa6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 DGKIO75912 1065 aa6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 ITGB1P05556 798 aa6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 GOT1P17174 413 aa6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 LSP1P33241 339 aa6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 CYP2C18P33260 490 aa6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 MAGEA6P43360 314 aa6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 SLCO1A2P46721 670 aa6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 PITX1P78337 314 aaPredicted RBP6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 IFI35P80217 286 aaPredicted RBP6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 SARNPP82979 210 aaKnown RBP6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 CDK16Q00536 496 aa6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 GUCY1A3Q02108 690 aa6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 GBE1Q04446 702 aa6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 SMARCB1Q12824 385 aa6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 SLC10A2Q12908 348 aaPredicted RBP6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 ELAVL2Q12926 359 aaKnown RBP6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 PAFAH1B3Q15102 231 aaKnown RBP6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 LONRF1Q17RB8 773 aa6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 OTUD1Q5VV17 481 aaPredicted RBP6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 HEATR6Q6AI08 1181 aaKnown RBP6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 C3orf62Q6ZUJ4 267 aa6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 GPRIN1Q7Z2K8 1008 aa6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 TADA2BQ86TJ2 420 aa6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 VPS52Q8N1B4 723 aa6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 PYROXD2Q8N2H3 581 aa6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 ATP11CQ8NB49 1132 aa6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 MCUQ8NE86 351 aa6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 BCAS4Q8TDM0 211 aa6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 EPS8L3Q8TE67 593 aaKnown RBP6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 SH3TC2Q8TF17 1288 aa6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 ARHGEF2Q92974 986 aaKnown RBP6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 BEGAINQ9BUH8 593 aa6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 ZCWPW1Q9H0M4 648 aa6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 UNC93B1Q9H1C4 597 aa6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 EPN3Q9H201 632 aa6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 VPS37BQ9H9H4 285 aa6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 WDR6Q9NNW5 1121 aaKnown RBP6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 PAK6Q9NQU5 681 aaPredicted RBP6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 ARHGEF4Q9NR80 690 aa6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 TMEM30AQ9NV96 361 aa6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 TMLHEQ9NVH6 421 aa6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 DDIT4Q9NX09 232 aa6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 DTLQ9NZJ0 730 aa6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 CALCOCO1Q9P1Z2 691 aa6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 LGALS13Q9UHV8 139 aa6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 SLC24A2Q9UI40 661 aa6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 OGDHLQ9ULD0 1010 aa6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 ACTL7BQ9Y614 415 aa6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 TRIP11Q15643 1979 aa6.48□□□□□ -1.37
GTF3C3-202ENST00000409364 SYNJ2BP-COX16A0A087WUM0 186 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 KRTAP9-6A0A140TA67 174 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 EXOC1LA0A1B0GW35 172 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 GMNCA6NCL1 334 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 ERICH4A6NGS2 130 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 DCDC2CA8MYV0 355 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 GOLGA8MH3BSY2 632 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 TNFRSF10BO14763 440 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 PPP1R12AO14974 1030 aaPredicted RBP6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 TRIM66O15016 1216 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 MTSS1O43312 755 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 SPAG6O75602 509 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 HTR7P34969 479 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 FDFT1P37268 417 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 MAGEA11P43364 429 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 GLUD2P49448 558 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 SEMA3BQ13214 749 aa6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 MRPL58Q14197 206 aaKnown RBP6.47□□□□□ -1.37
GTF3C3-202ENST00000409364 KCNJ11Q14654 390 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms