RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 SLC2A3P11169 496 aa21.09■□□□□ 0.97
PTCD3-202ENST00000409326 TFE3P19532 575 aaPredicted RBP21.09■□□□□ 0.97
PTCD3-202ENST00000409326 CDC25BP30305 580 aa21.09■□□□□ 0.97
PTCD3-202ENST00000409326 CCR1P32246 355 aa21.09■□□□□ 0.97
PTCD3-202ENST00000409326 OPRD1P41143 372 aa21.09■□□□□ 0.97
PTCD3-202ENST00000409326 NME3Q13232 169 aa21.09■□□□□ 0.97
PTCD3-202ENST00000409326 PPP2R5DQ14738 602 aa21.09■□□□□ 0.97
PTCD3-202ENST00000409326 PON2Q15165 354 aa21.09■□□□□ 0.97
PTCD3-202ENST00000409326 ASTE1Q2TB18 679 aaPredicted RBP21.09■□□□□ 0.97
PTCD3-202ENST00000409326 ANO4Q32M45 955 aa21.09■□□□□ 0.97
PTCD3-202ENST00000409326 ADGRF1Q5T601 910 aa21.09■□□□□ 0.97
PTCD3-202ENST00000409326 CCDC105Q8IYK2 499 aa21.09■□□□□ 0.97
PTCD3-202ENST00000409326 RXFP2Q8WXD0 754 aa21.09■□□□□ 0.97
PTCD3-202ENST00000409326 EXOC4Q96A65 974 aa21.09■□□□□ 0.97
PTCD3-202ENST00000409326 TBCBQ99426 244 aa21.09■□□□□ 0.97
PTCD3-202ENST00000409326 PIGVQ9NUD9 493 aa21.09■□□□□ 0.97
PTCD3-202ENST00000409326 NENFQ9UMX5 172 aa21.09■□□□□ 0.97
PTCD3-202ENST00000409326 NDRG2Q9UN36 371 aaKnown RBP21.09■□□□□ 0.97
PTCD3-202ENST00000409326 SIT1Q9Y3P8 196 aa21.09■□□□□ 0.97
PTCD3-202ENST00000409326 MTF2Q9Y483 593 aaPredicted RBP21.09■□□□□ 0.97
PTCD3-202ENST00000409326 FAM170BA6NMN3 283 aa21.08■□□□□ 0.97
PTCD3-202ENST00000409326 NEDD8-MDP1E9PL57 170 aa21.08■□□□□ 0.97
PTCD3-202ENST00000409326 GFRA2O00451 464 aa21.08■□□□□ 0.97
PTCD3-202ENST00000409326 ADCY5O95622 1261 aa21.08■□□□□ 0.97
PTCD3-202ENST00000409326 MOCS2O96007 188 aaPredicted RBP21.08■□□□□ 0.97
PTCD3-202ENST00000409326 F9P00740 461 aa21.08■□□□□ 0.97
PTCD3-202ENST00000409326 MYBL1P10243 752 aa21.08■□□□□ 0.97
PTCD3-202ENST00000409326 PDGFRAP16234 1089 aa21.08■□□□□ 0.97
PTCD3-202ENST00000409326 SDC4P31431 198 aa21.08■□□□□ 0.97
PTCD3-202ENST00000409326 RFC1P35251 1148 aaPredicted RBP21.08■□□□□ 0.97
PTCD3-202ENST00000409326 EIF2DP41214 584 aaKnown RBP21.08■□□□□ 0.97
PTCD3-202ENST00000409326 PTPN9P43378 593 aa21.08■□□□□ 0.97
PTCD3-202ENST00000409326 DEUP1Q05D60 604 aa21.08■□□□□ 0.97
PTCD3-202ENST00000409326 SLC18A3Q16572 532 aa21.08■□□□□ 0.97
PTCD3-202ENST00000409326 FAM133BQ5BKY9 247 aaKnown RBP21.08■□□□□ 0.97
PTCD3-202ENST00000409326 TMEM196Q5HYL7 178 aa21.08■□□□□ 0.97
PTCD3-202ENST00000409326 NAIF1Q69YI7 327 aaPredicted RBP21.08■□□□□ 0.97
PTCD3-202ENST00000409326 PLEKHA7Q6IQ23 1121 aa21.08■□□□□ 0.97
PTCD3-202ENST00000409326 ALKBH5Q6P6C2 394 aaKnown RBP21.08■□□□□ 0.97
PTCD3-202ENST00000409326 C12orf40Q86WS4 652 aa21.08■□□□□ 0.97
PTCD3-202ENST00000409326 ETFBKMTQ8IXQ9 262 aa21.08■□□□□ 0.97
PTCD3-202ENST00000409326 CD101Q93033 1021 aa21.08■□□□□ 0.97
PTCD3-202ENST00000409326 ZNF653Q96CK0 615 aa21.08■□□□□ 0.97
PTCD3-202ENST00000409326 BTN2A3PQ96KV6 586 aa21.08■□□□□ 0.97
PTCD3-202ENST00000409326 MCEEQ96PE7 176 aa21.08■□□□□ 0.97
PTCD3-202ENST00000409326 CHP1Q99653 195 aa21.08■□□□□ 0.97
PTCD3-202ENST00000409326 P2RY13Q9BPV8 354 aa21.08■□□□□ 0.97
PTCD3-202ENST00000409326 BBS2Q9BXC9 721 aa21.08■□□□□ 0.97
PTCD3-202ENST00000409326 DEF6Q9H4E7 631 aa21.08■□□□□ 0.97
PTCD3-202ENST00000409326 PARVAQ9NVD7 372 aa21.08■□□□□ 0.97
PTCD3-202ENST00000409326 CNOT8Q9UFF9 292 aaKnown RBP21.08■□□□□ 0.97
PTCD3-202ENST00000409326 ATG2BQ96BY7 2078 aa21.08■□□□□ 0.96
PTCD3-202ENST00000409326 KCNU1A8MYU2 1149 aa21.07■□□□□ 0.96
PTCD3-202ENST00000409326 ATMINO43313 823 aaPredicted RBP21.07■□□□□ 0.96
PTCD3-202ENST00000409326 PI15O43692 258 aa21.07■□□□□ 0.96
PTCD3-202ENST00000409326 CACNG3O60359 315 aa21.07■□□□□ 0.96
PTCD3-202ENST00000409326 PENKP01210 267 aaPredicted RBP21.07■□□□□ 0.96
PTCD3-202ENST00000409326 TYRP14679 529 aa21.07■□□□□ 0.96
PTCD3-202ENST00000409326 ABCB4P21439 1286 aa21.07■□□□□ 0.96
PTCD3-202ENST00000409326 GPD1P21695 349 aa21.07■□□□□ 0.96
PTCD3-202ENST00000409326 RDXP35241 583 aaKnown RBP21.07■□□□□ 0.96
PTCD3-202ENST00000409326 CXCR3P49682 368 aa21.07■□□□□ 0.96
PTCD3-202ENST00000409326 MTA1Q13330 715 aa21.07■□□□□ 0.96
PTCD3-202ENST00000409326 MAMLD1Q13495 774 aa21.07■□□□□ 0.96
PTCD3-202ENST00000409326 CCDC14Q49A88 953 aa21.07■□□□□ 0.96
PTCD3-202ENST00000409326 BRMS1LQ5PSV4 323 aa21.07■□□□□ 0.96
PTCD3-202ENST00000409326 FYB2Q5VWT5 728 aa21.07■□□□□ 0.96
PTCD3-202ENST00000409326 NADSYN1Q6IA69 706 aa21.07■□□□□ 0.96
PTCD3-202ENST00000409326 SND1Q7KZF4 910 aaKnown RBP eCLIP21.07■□□□□ 0.96
PTCD3-202ENST00000409326 ATP6V0D2Q8N8Y2 350 aa21.07■□□□□ 0.96
PTCD3-202ENST00000409326 RNF34Q969K3 372 aa21.07■□□□□ 0.96
PTCD3-202ENST00000409326 DDX50Q9BQ39 737 aaKnown RBP21.07■□□□□ 0.96
PTCD3-202ENST00000409326 IRX2Q9BZI1 471 aaPredicted RBP21.07■□□□□ 0.96
PTCD3-202ENST00000409326 SLC12A6Q9UHW9 1150 aa21.07■□□□□ 0.96
PTCD3-202ENST00000409326 PAXBP1Q9Y5B6 917 aa21.07■□□□□ 0.96
PTCD3-202ENST00000409326 ANKRD62A6NC57 917 aa21.06■□□□□ 0.96
PTCD3-202ENST00000409326 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.06■□□□□ 0.96
PTCD3-202ENST00000409326 NCAM2O15394 837 aa21.06■□□□□ 0.96
PTCD3-202ENST00000409326 ENDOD1O94919 500 aa21.06■□□□□ 0.96
PTCD3-202ENST00000409326 CYBBP04839 570 aa21.06■□□□□ 0.96
PTCD3-202ENST00000409326 SLC6A4P31645 630 aa21.06■□□□□ 0.96
PTCD3-202ENST00000409326 GALK1P51570 392 aa21.06■□□□□ 0.96
PTCD3-202ENST00000409326 RPL7AP62424 266 aaKnown RBP21.06■□□□□ 0.96
PTCD3-202ENST00000409326 GFPT1Q06210 699 aaPredicted RBP21.06■□□□□ 0.96
PTCD3-202ENST00000409326 GRSF1Q12849 480 aaKnown RBP eCLIP21.06■□□□□ 0.96
PTCD3-202ENST00000409326 FZD5Q13467 585 aa21.06■□□□□ 0.96
PTCD3-202ENST00000409326 CCDC122Q5T0U0 273 aa21.06■□□□□ 0.96
PTCD3-202ENST00000409326 FSTL4Q6MZW2 842 aa21.06■□□□□ 0.96
PTCD3-202ENST00000409326 DCUN1D2Q6PH85 259 aa21.06■□□□□ 0.96
PTCD3-202ENST00000409326 STRADAQ7RTN6 431 aa21.06■□□□□ 0.96
PTCD3-202ENST00000409326 TMEM105Q8N8V8 129 aa21.06■□□□□ 0.96
PTCD3-202ENST00000409326 CLDN23Q96B33 292 aa21.06■□□□□ 0.96
PTCD3-202ENST00000409326 P2RY11Q96G91 374 aa21.06■□□□□ 0.96
PTCD3-202ENST00000409326 XPO6Q96QU8 1125 aaKnown RBP21.06■□□□□ 0.96
PTCD3-202ENST00000409326 NHEJ1Q9H9Q4 299 aaPredicted RBP21.06■□□□□ 0.96
PTCD3-202ENST00000409326 FBRSL1Q9HCM7 1045 aaKnown RBP21.06■□□□□ 0.96
PTCD3-202ENST00000409326 ARHGEF38Q9NXL2 777 aa21.06■□□□□ 0.96
PTCD3-202ENST00000409326 XPO7Q9UIA9 1087 aaKnown RBP21.06■□□□□ 0.96
PTCD3-202ENST00000409326 SCINQ9Y6U3 715 aa21.06■□□□□ 0.96
PTCD3-202ENST00000409326 GOLGA6L7A0A1B0GV03 622 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms