RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 KITP10721 976 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 ALADP13716 330 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 RBL1P28749 1068 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 RPL22P35268 128 aaKnown RBP4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 HOXD13P35453 343 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 HIRAP54198 1017 aaPredicted RBP4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 SESN3P58005 492 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 CREMQ03060 361 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 MPP3Q13368 585 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 E2F5Q15329 346 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 TARBP2Q15633 366 aaKnown RBP4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 PCSK7Q16549 785 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 ZNF792Q3KQV3 632 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 ACCSLQ4AC99 568 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 ZBTB41Q5SVQ8 909 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 SYCP2LQ5T4T6 812 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 AP1ARQ63HQ0 302 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 OLFML2BQ68BL8 750 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 DRICH1Q6PGQ1 229 aaPredicted RBP4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 FAM35AQ86V20 835 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 MIB1Q86YT6 1006 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 MFN1Q8IWA4 741 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 PARP9Q8IXQ6 854 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 DCLK2Q8N568 766 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 ZNF557Q8N988 423 aaPredicted RBP4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 ARMC2Q8NEN0 867 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 LRRC15Q8TF66 581 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 CMTM5Q96DZ9 223 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 SIKE1Q9BRV8 207 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 NDFIP2Q9NV92 336 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 ETNK2Q9NVF9 386 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 GGA2Q9UJY4 613 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 SLC39A10Q9ULF5 831 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 PHTF1Q9UMS5 762 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 STXBP5LQ9Y2K9 1186 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 HES2Q9Y543 173 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 PCDHB12Q9Y5F1 795 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 ABCA3Q99758 1704 aa4.88□□□□□ -1.63
PCDH11X-207ENST00000406881 TRPC5OSA6NMA1 111 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 H0Y626 953 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 ALOX15BO15296 676 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 CFLARO15519 480 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 RAMP2O60895 175 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 TRPA1O75762 1119 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 STAU1O95793 577 aaKnown RBP4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 RBP1P09455 135 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 PYGBP11216 843 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 MBL2P11226 248 aaPredicted RBP4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 DDX5P17844 614 aaKnown RBP4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 ATP4AP20648 1035 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 BDNFP23560 247 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 TUBP50607 506 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 AP2B1P63010 937 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 NSUN2Q08J23 767 aaKnown RBP eCLIP4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 CDH18Q13634 790 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 GRB14Q14449 540 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 POLD3Q15054 466 aaPredicted RBP4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 CHI3L2Q15782 390 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 C15orf59Q2T9L4 293 aaPredicted RBP4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 SLC10A6Q3KNW5 377 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 SLC25A52Q3SY17 297 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 INTS6LQ5JSJ4 861 aaKnown RBP4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 PPP1R26Q5T8A7 1209 aaPredicted RBP4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 ANKS3Q6ZW76 656 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 XYLT1Q86Y38 959 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 RNF135Q8IUD6 432 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 SLC25A41Q8N5S1 370 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 EDEM1Q92611 657 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 BORCS6Q96GS4 357 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 ATXN7L3BQ96GX2 97 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 KCNK16Q96T55 309 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 KLF6Q99612 283 aaPredicted RBP4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 HNRNPABQ99729 332 aaKnown RBP4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 EGFL8Q99944 293 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 TMEM109Q9BVC6 243 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 GPR63Q9BZJ6 419 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 KDM4CQ9H3R0 1056 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 NXF3Q9H4D5 531 aaKnown RBP4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 APOBEC3GQ9HC16 384 aaKnown RBP4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 ALG13Q9NP73 1137 aaKnown RBP4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 ENTPD7Q9NQZ7 604 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 DYRK4Q9NR20 520 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 SALL4Q9UJQ4 1053 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 COG5Q9UP83 839 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 PKP3Q9Y446 797 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 MYH1P12882 1939 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 CLUHO75153 1309 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 RASSF10A6NK89 507 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 ZNF197O14709 1029 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 VNN1O95497 513 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 SYF2O95926 243 aaKnown RBP4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 USP17L7P0C7H9 530 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 RALBP11234 206 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 STMN1P16949 149 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 WARSP23381 471 aaKnown RBP4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 CD52P31358 61 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 PGM1P36871 562 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 CDK7P50613 346 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 SP2Q02086 613 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 ITGA7Q13683 1181 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms