RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 SLC22A17Q8WUG5 538 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 PGAP3Q96FM1 320 aaPredicted RBP3.84□□□□□ -1.79
RTN4-208ENST00000404909 ZNF670Q9BS34 389 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 PBX4Q9BYU1 374 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 NKX2-4Q9H2Z4 354 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 HOMER3Q9NSC5 361 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 ETNK2Q9NVF9 386 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 CLIC5Q9NZA1 410 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 ASIC3Q9UHC3 531 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 LZTS1Q9Y250 596 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 MFHAS1Q9Y4C4 1052 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 PRUNE2Q8WUY3 3088 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 C2orf78A6NCI8 922 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 ZNF840PA6NDX5 716 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 H3BRJ5 948 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 H7C0C1 242 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 APOC4-APOC2K7ER74 178 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 SGK1O00141 431 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 SCAMP3O14828 347 aaKnown RBP3.84□□□□□ -1.79
RTN4-208ENST00000404909 MCF2LO15068 1137 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 LIASO43766 372 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 PAGE1O75459 146 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 GAS8O95995 478 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 APOEP02649 317 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 APOC2P02655 101 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 EPHB2P29323 1055 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 ATP5C1P36542 298 aaKnown RBP3.84□□□□□ -1.79
RTN4-208ENST00000404909 ATP5OP48047 213 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 FNTAP49354 379 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 CARSP49589 748 aaKnown RBP3.84□□□□□ -1.79
RTN4-208ENST00000404909 CLCN6P51797 869 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 EIF3EP60228 445 aaKnown RBP3.84□□□□□ -1.79
RTN4-208ENST00000404909 GBE1Q04446 702 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 CAMK1Q14012 370 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 DHX34Q14147 1143 aaKnown RBP3.84□□□□□ -1.79
RTN4-208ENST00000404909 CYP1B1Q16678 543 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 HECTD3Q5T447 861 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 DARS2Q6PI48 645 aaKnown RBP3.84□□□□□ -1.79
RTN4-208ENST00000404909 CCDC149Q6ZUS6 474 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 RFX8Q6ZV50 586 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 BEND5Q7L4P6 421 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 ITIH5Q86UX2 942 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 ELMOD1Q8N336 334 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 TTC13Q8NBP0 860 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 PSMG2Q969U7 264 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 NTAN1Q96AB6 310 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 FCRL2Q96LA5 508 aaPredicted RBP3.84□□□□□ -1.79
RTN4-208ENST00000404909 CYP2S1Q96SQ9 504 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 EPAS1Q99814 870 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 CORO1BQ9BR76 489 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 TTLL2Q9BWV7 592 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 SLC28A3Q9HAS3 691 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 ARHGEF4Q9NR80 690 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 OLA1Q9NTK5 396 aaKnown RBP3.84□□□□□ -1.79
RTN4-208ENST00000404909 SMPD4Q9NXE4 827 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 HSFX1Q9UBD0 423 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 PCYOX1Q9UHG3 505 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 FEZ2Q9UHY8 353 aaPredicted RBP3.84□□□□□ -1.79
RTN4-208ENST00000404909 MSRAQ9UJ68 235 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 NFU1Q9UMS0 254 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 EFR3BQ9Y2G0 817 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 SNX24Q9Y343 169 aa3.84□□□□□ -1.79
RTN4-208ENST00000404909 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.84□□□□□ -1.8
RTN4-208ENST00000404909 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.84□□□□□ -1.8
RTN4-208ENST00000404909 COCHO43405 550 aa3.84□□□□□ -1.8
RTN4-208ENST00000404909 LRIG2O94898 1065 aa3.84□□□□□ -1.8
RTN4-208ENST00000404909 SEC31AO94979 1220 aaKnown RBP3.84□□□□□ -1.8
RTN4-208ENST00000404909 IGLV3-25P01717 112 aa3.84□□□□□ -1.8
RTN4-208ENST00000404909 RB1P06400 928 aa3.84□□□□□ -1.8
RTN4-208ENST00000404909 MYBL2P10244 700 aa3.84□□□□□ -1.8
RTN4-208ENST00000404909 RBP3P10745 1247 aa3.84□□□□□ -1.8
RTN4-208ENST00000404909 IRF1P10914 325 aa3.84□□□□□ -1.8
RTN4-208ENST00000404909 MYL4P12829 197 aa3.84□□□□□ -1.8
RTN4-208ENST00000404909 ETS1P14921 441 aa3.84□□□□□ -1.8
RTN4-208ENST00000404909 GJA1P17302 382 aa3.84□□□□□ -1.8
RTN4-208ENST00000404909 GABRR2P28476 465 aa3.84□□□□□ -1.8
RTN4-208ENST00000404909 ADCY8P40145 1251 aa3.84□□□□□ -1.8
RTN4-208ENST00000404909 KCNQ1P51787 676 aa3.84□□□□□ -1.8
RTN4-208ENST00000404909 VCPP55072 806 aaKnown RBP3.84□□□□□ -1.8
RTN4-208ENST00000404909 UBE3AQ05086 875 aa3.84□□□□□ -1.8
RTN4-208ENST00000404909 TAZQ16635 292 aa3.84□□□□□ -1.8
RTN4-208ENST00000404909 PPM1LQ5SGD2 360 aa3.84□□□□□ -1.8
RTN4-208ENST00000404909 PSTKQ8IV42 348 aaKnown RBP3.84□□□□□ -1.8
RTN4-208ENST00000404909 GPR65Q8IYL9 337 aa3.84□□□□□ -1.8
RTN4-208ENST00000404909 HS6ST3Q8IZP7 471 aa3.84□□□□□ -1.8
RTN4-208ENST00000404909 FAM71DQ8N9W8 422 aa3.84□□□□□ -1.8
RTN4-208ENST00000404909 C12orf50Q8NA57 414 aaPredicted RBP3.84□□□□□ -1.8
RTN4-208ENST00000404909 PDZD8Q8NEN9 1154 aa3.84□□□□□ -1.8
RTN4-208ENST00000404909 GRK7Q8WTQ7 553 aa3.84□□□□□ -1.8
RTN4-208ENST00000404909 GDPD5Q8WTR4 605 aa3.84□□□□□ -1.8
RTN4-208ENST00000404909 CASKIN2Q8WXE0 1202 aa3.84□□□□□ -1.8
RTN4-208ENST00000404909 RSAD2Q8WXG1 361 aa3.84□□□□□ -1.8
RTN4-208ENST00000404909 ANKRD7Q92527 254 aa3.84□□□□□ -1.8
RTN4-208ENST00000404909 ERP44Q9BS26 406 aa3.84□□□□□ -1.8
RTN4-208ENST00000404909 RAB17Q9H0T7 212 aa3.84□□□□□ -1.8
RTN4-208ENST00000404909 ATXN3LQ9H3M9 355 aa3.84□□□□□ -1.8
RTN4-208ENST00000404909 ZNF334Q9HCZ1 680 aaPredicted RBP3.84□□□□□ -1.8
RTN4-208ENST00000404909 MAN1C1Q9NR34 630 aa3.84□□□□□ -1.8
RTN4-208ENST00000404909 GKN1Q9NS71 199 aa3.84□□□□□ -1.8
RTN4-208ENST00000404909 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.84□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms