RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 CNTN3Q9P232 1028 aa9.45□□□□□ -0.9
HPS4-203ENST00000402105 TAF1LQ8IZX4 1826 aa9.45□□□□□ -0.9
HPS4-203ENST00000402105 F8W8V4 182 aa9.45□□□□□ -0.9
HPS4-203ENST00000402105 CSPG5O95196 566 aa9.45□□□□□ -0.9
HPS4-203ENST00000402105 KLHL2O95198 593 aa9.45□□□□□ -0.9
HPS4-203ENST00000402105 CLPTM1O96005 669 aa9.45□□□□□ -0.9
HPS4-203ENST00000402105 UQCRBP14927 111 aa9.45□□□□□ -0.9
HPS4-203ENST00000402105 VAV1P15498 845 aa9.45□□□□□ -0.9
HPS4-203ENST00000402105 DESP17661 470 aa9.45□□□□□ -0.9
HPS4-203ENST00000402105 TPH1P17752 444 aa9.45□□□□□ -0.9
HPS4-203ENST00000402105 EPHA3P29320 983 aa9.45□□□□□ -0.9
HPS4-203ENST00000402105 NUMBP49757 651 aa9.45□□□□□ -0.9
HPS4-203ENST00000402105 IDH3AP50213 366 aa9.45□□□□□ -0.9
HPS4-203ENST00000402105 USP46P62068 366 aa9.45□□□□□ -0.9
HPS4-203ENST00000402105 TMEM132BQ14DG7 1078 aa9.45□□□□□ -0.9
HPS4-203ENST00000402105 GOLGA7BQ2TAP0 167 aa9.45□□□□□ -0.9
HPS4-203ENST00000402105 C6orf52Q5T4I8 152 aa9.45□□□□□ -0.9
HPS4-203ENST00000402105 KRT27Q7Z3Y8 459 aa9.45□□□□□ -0.9
HPS4-203ENST00000402105 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.45□□□□□ -0.9
HPS4-203ENST00000402105 NAT14Q8WUY8 206 aa9.45□□□□□ -0.9
HPS4-203ENST00000402105 LPAR1Q92633 364 aa9.45□□□□□ -0.9
HPS4-203ENST00000402105 OLFM3Q96PB7 478 aa9.45□□□□□ -0.9
HPS4-203ENST00000402105 XPNPEP3Q9NQH7 507 aa9.45□□□□□ -0.9
HPS4-203ENST00000402105 TMPRSS4Q9NRS4 437 aa9.45□□□□□ -0.9
HPS4-203ENST00000402105 RPS6KL1Q9Y6S9 549 aa9.45□□□□□ -0.9
HPS4-203ENST00000402105 KIF13BQ9NQT8 1826 aa9.45□□□□□ -0.9
HPS4-203ENST00000402105 MYH9P35579 1960 aaKnown RBP9.44□□□□□ -0.9
HPS4-203ENST00000402105 C15orf38-AP3S2A0A0A6YYH1 394 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 CHADO15335 359 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 HCRTO43612 131 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 GRIA2P42262 883 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 ALDH1A3P47895 512 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 CCNIQ14094 377 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 PDE1CQ14123 709 aaPredicted RBP9.44□□□□□ -0.9
HPS4-203ENST00000402105 PDCD2Q16342 344 aaPredicted RBP9.44□□□□□ -0.9
HPS4-203ENST00000402105 GSTA3Q16772 222 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 JADE1Q6IE81 842 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 RNF111Q6ZNA4 994 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 PID1Q7Z2X4 250 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 ARPINQ7Z6K5 226 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 SNX32Q86XE0 403 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 ARHGAP18Q8N392 663 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 DCLK2Q8N568 766 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 ZNF781Q8N8C0 355 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 CMASQ8NFW8 434 aaPredicted RBP9.44□□□□□ -0.9
HPS4-203ENST00000402105 OR6B3Q8NGW1 331 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 CLEC4CQ8WTT0 213 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 CMTM5Q96DZ9 223 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 HPDLQ96IR7 371 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 CATSPER2Q96P56 530 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 EBNA1BP2Q99848 306 aaKnown RBP9.44□□□□□ -0.9
HPS4-203ENST00000402105 CNPY3Q9BT09 278 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 NUF2Q9BZD4 464 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 FAM192AQ9GZU8 254 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 USP29Q9HBJ7 922 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 SNX9Q9Y5X1 595 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 MYO18AQ92614 2054 aaKnown RBP9.44□□□□□ -0.9
HPS4-203ENST00000402105 TCRBV5S1A1TA0A578 114 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 LACTBL1A8MY62 500 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 SPAG6O75602 509 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 NPM3O75607 178 aaKnown RBP9.44□□□□□ -0.9
HPS4-203ENST00000402105 ZNF132P52740 706 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 ART3Q13508 389 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 FLOT2Q14254 428 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 FAM47CQ5HY64 1035 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 GLRA4Q5JXX5 417 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 TMEM198Q66K66 360 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 MAP1SQ66K74 1059 aaPredicted RBP9.44□□□□□ -0.9
HPS4-203ENST00000402105 TRNP1Q6NT89 227 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 SLC4A11Q8NBS3 891 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 PPWD1Q96BP3 646 aaKnown RBP9.44□□□□□ -0.9
HPS4-203ENST00000402105 CDHR1Q96JP9 859 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 LENG8Q96PV6 779 aaPredicted RBP9.44□□□□□ -0.9
HPS4-203ENST00000402105 COG4Q9H9E3 785 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 LIN28AQ9H9Z2 209 aaKnown RBP9.44□□□□□ -0.9
HPS4-203ENST00000402105 LZTS1Q9Y250 596 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 AFG3L2Q9Y4W6 797 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 COL5A3P25940 1745 aaPredicted RBP9.44□□□□□ -0.9
HPS4-203ENST00000402105 HMX2A2RU54 273 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 SDR42E2A6NKP2 422 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 SRGAP2BP0DMP2 458 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 CPA3P15088 417 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 PRAMEP78395 509 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 NME3Q13232 169 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 R3HDM1Q15032 1099 aaKnown RBP9.44□□□□□ -0.9
HPS4-203ENST00000402105 SLC9B1Q4ZJI4 515 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 PDSS2Q86YH6 399 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 ZNF778Q96MU6 729 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 ACAD9Q9H845 621 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 PDLIM7Q9NR12 457 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 GALNT8Q9NY28 637 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 SIRPGQ9P1W8 387 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 ARHGAP26Q9UNA1 814 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 SSX2IPQ9Y2D8 614 aa9.44□□□□□ -0.9
HPS4-203ENST00000402105 PAPSS1O43252 624 aaPredicted RBP9.43□□□□□ -0.9
HPS4-203ENST00000402105 SEC24DO94855 1032 aaPredicted RBP9.43□□□□□ -0.9
HPS4-203ENST00000402105 PGK2P07205 417 aa9.43□□□□□ -0.9
HPS4-203ENST00000402105 CRABP2P29373 138 aa9.43□□□□□ -0.9
HPS4-203ENST00000402105 ARL2P36404 184 aa9.43□□□□□ -0.9
HPS4-203ENST00000402105 ZNF143P52747 638 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms