RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 MICAL2O94851 1124 aa16.49■□□□□ 0.23
CHRFAM7A-203ENST00000401522 P4HA1P13674 534 aa16.49■□□□□ 0.23
CHRFAM7A-203ENST00000401522 TAF6P49848 677 aa16.49■□□□□ 0.23
CHRFAM7A-203ENST00000401522 EFTUD2Q15029 972 aaKnown RBP eCLIP16.49■□□□□ 0.23
CHRFAM7A-203ENST00000401522 BBS9Q3SYG4 887 aa16.49■□□□□ 0.23
CHRFAM7A-203ENST00000401522 TLDC1Q6P9B6 456 aa16.49■□□□□ 0.23
CHRFAM7A-203ENST00000401522 EMC1Q8N766 993 aa16.49■□□□□ 0.23
CHRFAM7A-203ENST00000401522 SP7Q8TDD2 431 aaPredicted RBP16.49■□□□□ 0.23
CHRFAM7A-203ENST00000401522 MZB1Q8WU39 189 aa16.49■□□□□ 0.23
CHRFAM7A-203ENST00000401522 DCAKDQ8WVC6 231 aa16.49■□□□□ 0.23
CHRFAM7A-203ENST00000401522 TMEM176AQ96HP8 235 aa16.49■□□□□ 0.23
CHRFAM7A-203ENST00000401522 TMEM237Q96Q45 408 aa16.49■□□□□ 0.23
CHRFAM7A-203ENST00000401522 WDR83Q9BRX9 315 aaKnown RBP16.49■□□□□ 0.23
CHRFAM7A-203ENST00000401522 CYLDQ9NQC7 956 aa16.49■□□□□ 0.23
CHRFAM7A-203ENST00000401522 HCSTQ9UBK5 93 aa16.49■□□□□ 0.23
CHRFAM7A-203ENST00000401522 PCSK1NQ9UHG2 260 aa16.49■□□□□ 0.23
CHRFAM7A-203ENST00000401522 USP18Q9UMW8 372 aa16.49■□□□□ 0.23
CHRFAM7A-203ENST00000401522 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.49■□□□□ 0.23
CHRFAM7A-203ENST00000401522 KPNA7A9QM74 516 aa16.49■□□□□ 0.23
CHRFAM7A-203ENST00000401522 TMEM189-UBE2V1I3L0A0 370 aa16.49■□□□□ 0.23
CHRFAM7A-203ENST00000401522 HGSO14964 777 aaPredicted RBP16.49■□□□□ 0.23
CHRFAM7A-203ENST00000401522 TLL1O43897 1013 aa16.49■□□□□ 0.23
CHRFAM7A-203ENST00000401522 CILPO75339 1184 aa16.49■□□□□ 0.23
CHRFAM7A-203ENST00000401522 B3GAT3O94766 335 aa16.49■□□□□ 0.23
CHRFAM7A-203ENST00000401522 TMEM63AO94886 807 aa16.49■□□□□ 0.23
CHRFAM7A-203ENST00000401522 GALTP07902 379 aa16.49■□□□□ 0.23
CHRFAM7A-203ENST00000401522 CD48P09326 243 aa16.49■□□□□ 0.23
CHRFAM7A-203ENST00000401522 IGFBP6P24592 240 aaPredicted RBP16.49■□□□□ 0.23
CHRFAM7A-203ENST00000401522 STIP1P31948 543 aaKnown RBP16.49■□□□□ 0.23
CHRFAM7A-203ENST00000401522 OR1G1P47890 313 aa16.49■□□□□ 0.23
CHRFAM7A-203ENST00000401522 CDH8P55286 799 aa16.49■□□□□ 0.23
CHRFAM7A-203ENST00000401522 ROR1Q01973 937 aa16.49■□□□□ 0.23
CHRFAM7A-203ENST00000401522 DPYSL3Q14195 570 aa16.49■□□□□ 0.23
CHRFAM7A-203ENST00000401522 CD300LGQ6UXG3 332 aa16.49■□□□□ 0.23
CHRFAM7A-203ENST00000401522 FAM71DQ8N9W8 422 aa16.49■□□□□ 0.23
CHRFAM7A-203ENST00000401522 C3orf58Q8NDZ4 430 aa16.49■□□□□ 0.23
CHRFAM7A-203ENST00000401522 HSPH1Q92598 858 aa16.49■□□□□ 0.23
CHRFAM7A-203ENST00000401522 CYTH2Q99418 400 aa16.49■□□□□ 0.23
CHRFAM7A-203ENST00000401522 ELOVL4Q9GZR5 314 aa16.49■□□□□ 0.23
CHRFAM7A-203ENST00000401522 CXorf56Q9H5V9 222 aa16.49■□□□□ 0.23
CHRFAM7A-203ENST00000401522 SMYD3Q9H7B4 428 aa16.49■□□□□ 0.23
CHRFAM7A-203ENST00000401522 C10orf88Q9H8K7 445 aa16.49■□□□□ 0.23
CHRFAM7A-203ENST00000401522 GDAP2Q9NXN4 497 aa16.49■□□□□ 0.23
CHRFAM7A-203ENST00000401522 SCN1AP35498 2009 aa16.48■□□□□ 0.23
CHRFAM7A-203ENST00000401522 CARNS1A5YM72 827 aa16.48■□□□□ 0.23
CHRFAM7A-203ENST00000401522 NRP1O14786 923 aa16.48■□□□□ 0.23
CHRFAM7A-203ENST00000401522 SPTLC1O15269 473 aa16.48■□□□□ 0.23
CHRFAM7A-203ENST00000401522 SPAG6O75602 509 aa16.48■□□□□ 0.23
CHRFAM7A-203ENST00000401522 TROVE2P10155 538 aaKnown RBP eCLIP16.48■□□□□ 0.23
CHRFAM7A-203ENST00000401522 RBP3P10745 1247 aa16.48■□□□□ 0.23
CHRFAM7A-203ENST00000401522 VDRP11473 427 aa16.48■□□□□ 0.23
CHRFAM7A-203ENST00000401522 ALDH7A1P49419 539 aaKnown RBP16.48■□□□□ 0.23
CHRFAM7A-203ENST00000401522 ZNF143P52747 638 aaPredicted RBP16.48■□□□□ 0.23
CHRFAM7A-203ENST00000401522 BCAR1P56945 870 aa16.48■□□□□ 0.23
CHRFAM7A-203ENST00000401522 MLLT1Q03111 559 aaPredicted RBP16.48■□□□□ 0.23
CHRFAM7A-203ENST00000401522 CBLBQ13191 982 aa16.48■□□□□ 0.23
CHRFAM7A-203ENST00000401522 TFDP2Q14188 446 aa16.48■□□□□ 0.23
CHRFAM7A-203ENST00000401522 SV2CQ496J9 727 aa16.48■□□□□ 0.23
CHRFAM7A-203ENST00000401522 SLC45A4Q5BKX6 768 aa16.48■□□□□ 0.23
CHRFAM7A-203ENST00000401522 OTOAQ7RTW8 1153 aa16.48■□□□□ 0.23
CHRFAM7A-203ENST00000401522 BANPQ8N9N5 519 aa16.48■□□□□ 0.23
CHRFAM7A-203ENST00000401522 SPATA18Q8TC71 538 aa16.48■□□□□ 0.23
CHRFAM7A-203ENST00000401522 MIS12Q9H081 205 aa16.48■□□□□ 0.23
CHRFAM7A-203ENST00000401522 VPS11Q9H270 941 aa16.48■□□□□ 0.23
CHRFAM7A-203ENST00000401522 FAM124BQ9H5Z6 455 aaPredicted RBP16.48■□□□□ 0.23
CHRFAM7A-203ENST00000401522 C15orf41Q9Y2V0 281 aa16.48■□□□□ 0.23
CHRFAM7A-203ENST00000401522 MRPL42Q9Y6G3 142 aaKnown RBP16.48■□□□□ 0.23
CHRFAM7A-203ENST00000401522 IQANK1A0A1B0GTG1 560 aa16.47■□□□□ 0.23
CHRFAM7A-203ENST00000401522 TCRBV7S3A2A0A539 114 aa16.47■□□□□ 0.23
CHRFAM7A-203ENST00000401522 M0QYV0 167 aa16.47■□□□□ 0.23
CHRFAM7A-203ENST00000401522 C2CD2LO14523 706 aa16.47■□□□□ 0.23
CHRFAM7A-203ENST00000401522 ENDOD1O94919 500 aa16.47■□□□□ 0.23
CHRFAM7A-203ENST00000401522 ANP32DO95626 131 aa16.47■□□□□ 0.23
CHRFAM7A-203ENST00000401522 SLC11A1P49279 550 aa16.47■□□□□ 0.23
CHRFAM7A-203ENST00000401522 RASSF2P50749 326 aa16.47■□□□□ 0.23
CHRFAM7A-203ENST00000401522 BASP1P80723 227 aaKnown RBP16.47■□□□□ 0.23
CHRFAM7A-203ENST00000401522 NOMO1Q15155 1222 aa16.47■□□□□ 0.23
CHRFAM7A-203ENST00000401522 ACCSLQ4AC99 568 aa16.47■□□□□ 0.23
CHRFAM7A-203ENST00000401522 FIBCD1Q8N539 461 aa16.47■□□□□ 0.23
CHRFAM7A-203ENST00000401522 GPATCH11Q8N954 259 aa16.47■□□□□ 0.23
CHRFAM7A-203ENST00000401522 N4BP2L2Q92802 583 aaPredicted RBP16.47■□□□□ 0.23
CHRFAM7A-203ENST00000401522 THOC1Q96FV9 657 aaKnown RBP16.47■□□□□ 0.23
CHRFAM7A-203ENST00000401522 TWNKQ96RR1 684 aa16.47■□□□□ 0.23
CHRFAM7A-203ENST00000401522 CNPY3Q9BT09 278 aa16.47■□□□□ 0.23
CHRFAM7A-203ENST00000401522 COLEC11Q9BWP8 271 aa16.47■□□□□ 0.23
CHRFAM7A-203ENST00000401522 CALN1Q9BXU9 219 aa16.47■□□□□ 0.23
CHRFAM7A-203ENST00000401522 A8MUI8 341 aa16.47■□□□□ 0.23
CHRFAM7A-203ENST00000401522 HNRNPCL1O60812 293 aaKnown RBP16.47■□□□□ 0.23
CHRFAM7A-203ENST00000401522 MT-ND3P03897 115 aa16.47■□□□□ 0.23
CHRFAM7A-203ENST00000401522 GPD1P21695 349 aa16.47■□□□□ 0.23
CHRFAM7A-203ENST00000401522 ADRA1DP25100 572 aa16.47■□□□□ 0.23
CHRFAM7A-203ENST00000401522 FAM102AQ5T9C2 384 aaPredicted RBP16.47■□□□□ 0.23
CHRFAM7A-203ENST00000401522 DARS2Q6PI48 645 aaKnown RBP16.47■□□□□ 0.23
CHRFAM7A-203ENST00000401522 PLCD3Q8N3E9 789 aa16.47■□□□□ 0.23
CHRFAM7A-203ENST00000401522 TTC39CQ8N584 583 aa16.47■□□□□ 0.23
CHRFAM7A-203ENST00000401522 CLP1Q92989 425 aaKnown RBP16.47■□□□□ 0.23
CHRFAM7A-203ENST00000401522 RSRC1Q96IZ7 334 aaKnown RBP16.47■□□□□ 0.23
CHRFAM7A-203ENST00000401522 FRMD8Q9BZ67 464 aaPredicted RBP16.47■□□□□ 0.23
CHRFAM7A-203ENST00000401522 L3MBTL1Q9Y468 752 aa16.47■□□□□ 0.23
CHRFAM7A-203ENST00000401522 SNX9Q9Y5X1 595 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms