RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 USP41Q3LFD5 358 aa11.25□□□□□ -0.61
CACNA1C-216ENST00000399638 NEK5Q6P3R8 708 aa11.25□□□□□ -0.61
CACNA1C-216ENST00000399638 DET1Q7L5Y6 550 aa11.25□□□□□ -0.61
CACNA1C-216ENST00000399638 DPP10Q8N608 796 aa11.25□□□□□ -0.61
CACNA1C-216ENST00000399638 ALLCQ8N6M5 410 aa11.25□□□□□ -0.61
CACNA1C-216ENST00000399638 GPRASP2Q96D09 838 aa11.25□□□□□ -0.61
CACNA1C-216ENST00000399638 FERD3LQ96RJ6 166 aa11.25□□□□□ -0.61
CACNA1C-216ENST00000399638 KCTD10Q9H3F6 313 aa11.25□□□□□ -0.61
CACNA1C-216ENST00000399638 ADGRB1O14514 1584 aa11.25□□□□□ -0.61
CACNA1C-216ENST00000399638 CXCL11O14625 94 aa11.25□□□□□ -0.61
CACNA1C-216ENST00000399638 RBMXL2O75526 392 aaKnown RBP11.25□□□□□ -0.61
CACNA1C-216ENST00000399638 GJA1P17302 382 aa11.25□□□□□ -0.61
CACNA1C-216ENST00000399638 ALAS2P22557 587 aa11.25□□□□□ -0.61
CACNA1C-216ENST00000399638 FNTAP49354 379 aa11.25□□□□□ -0.61
CACNA1C-216ENST00000399638 VSNL1P62760 191 aa11.25□□□□□ -0.61
CACNA1C-216ENST00000399638 GNA13Q14344 377 aa11.25□□□□□ -0.61
CACNA1C-216ENST00000399638 ELAC2Q9BQ52 826 aaKnown RBP11.25□□□□□ -0.61
CACNA1C-216ENST00000399638 KCNN2Q9H2S1 579 aa11.25□□□□□ -0.61
CACNA1C-216ENST00000399638 ABHD16BQ9H3Z7 469 aa11.25□□□□□ -0.61
CACNA1C-216ENST00000399638 KCNH7Q9NS40 1196 aa11.25□□□□□ -0.61
CACNA1C-216ENST00000399638 AHSPQ9NZD4 102 aa11.25□□□□□ -0.61
CACNA1C-216ENST00000399638 RBM7Q9Y580 266 aaKnown RBP11.25□□□□□ -0.61
CACNA1C-216ENST00000399638 PP2D1A8MPX8 630 aa11.25□□□□□ -0.61
CACNA1C-216ENST00000399638 TRIM66O15016 1216 aa11.25□□□□□ -0.61
CACNA1C-216ENST00000399638 BCAP31P51572 246 aa11.25□□□□□ -0.61
CACNA1C-216ENST00000399638 TMEM164Q5U3C3 297 aa11.25□□□□□ -0.61
CACNA1C-216ENST00000399638 C12orf60Q5U649 245 aa11.25□□□□□ -0.61
CACNA1C-216ENST00000399638 MRNIPQ6NTE8 343 aa11.25□□□□□ -0.61
CACNA1C-216ENST00000399638 KLHL1Q9NR64 748 aa11.25□□□□□ -0.61
CACNA1C-216ENST00000399638 NSMCE4AQ9NXX6 385 aa11.25□□□□□ -0.61
CACNA1C-216ENST00000399638 EFR3BQ9Y2G0 817 aa11.25□□□□□ -0.61
CACNA1C-216ENST00000399638 RHPN2P1A8MT19 583 aa11.25□□□□□ -0.61
CACNA1C-216ENST00000399638 PSMC3P17980 439 aa11.25□□□□□ -0.61
CACNA1C-216ENST00000399638 RRM2P31350 389 aa11.25□□□□□ -0.61
CACNA1C-216ENST00000399638 BNC1Q01954 994 aa11.25□□□□□ -0.61
CACNA1C-216ENST00000399638 BCL2L1Q07817 233 aa11.25□□□□□ -0.61
CACNA1C-216ENST00000399638 EDRF1Q3B7T1 1238 aa11.25□□□□□ -0.61
CACNA1C-216ENST00000399638 NAPEPLDQ6IQ20 393 aa11.25□□□□□ -0.61
CACNA1C-216ENST00000399638 RCOR2Q8IZ40 523 aa11.25□□□□□ -0.61
CACNA1C-216ENST00000399638 MCCC1Q96RQ3 725 aaPredicted RBP11.25□□□□□ -0.61
CACNA1C-216ENST00000399638 CNPY3Q9BT09 278 aa11.25□□□□□ -0.61
CACNA1C-216ENST00000399638 WNT8AQ9H1J5 351 aa11.25□□□□□ -0.61
CACNA1C-216ENST00000399638 AK5Q9Y6K8 562 aa11.25□□□□□ -0.61
CACNA1C-216ENST00000399638 CCDC163A0A0D9SF12 145 aa11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 OR7A10O76100 309 aa11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 OR1E1P30953 314 aa11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 KCNJ5P48544 419 aa11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 EXOSC10Q01780 885 aaKnown RBP11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 SPIDRQ14159 915 aa11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 CARTPTQ16568 116 aa11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 IZUMO3Q5VZ72 239 aa11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 PARP9Q8IXQ6 854 aa11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 CENPSQ8N2Z9 138 aa11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 NEK7Q8TDX7 302 aa11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 DCLK3Q9C098 648 aa11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 INO80Q9ULG1 1556 aaPredicted RBP11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 PHF20L1A8MW92 1017 aa11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 MAP2K7O14733 419 aa11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 SEPT4O43236 478 aa11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 AKAP10O43572 662 aa11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 ADH1CP00326 375 aa11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 MASP1P48740 699 aa11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 DGKKQ5KSL6 1271 aa11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 METTL21AQ8WXB1 218 aa11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 AGPAT1Q99943 283 aa11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 ELL3Q9HB65 397 aaPredicted RBP11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 DCDC2Q9UHG0 476 aa11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 TBC1D4O60343 1298 aa11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 PPP1R37O75864 691 aa11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 KRT16P08779 473 aa11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 TMED10P49755 219 aaKnown RBP11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 KCNK10P57789 538 aa11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 BTN3A2P78410 334 aa11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 PLOD1Q02809 727 aaPredicted RBP11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 INPP5AQ14642 412 aa11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 ZNHIT3Q15649 155 aaPredicted RBP11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 LINC00523Q86TU6 105 aa11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 ATP6V1G3Q96LB4 118 aa11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 CTNNAL1Q9UBT7 734 aa11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 OR10H1Q9Y4A9 318 aa11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 PCDHGB3Q9Y5G1 929 aa11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 PLA2G6O60733 806 aa11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 KATNA1O75449 491 aa11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 TCEA1P23193 301 aaKnown RBP11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 PTGER2P43116 358 aa11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 CYP51A1Q16850 503 aa11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 NACC2Q96BF6 587 aa11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 NSUN4Q96CB9 384 aaKnown RBP11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 ZFP69BQ9UJL9 534 aa11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 GARTP22102 1010 aa11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 EIF4BP23588 611 aaKnown RBP11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 MAPKAPK2P49137 400 aa11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 PIGHQ14442 188 aaPredicted RBP11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 SUZ12Q15022 739 aaKnown RBP11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 MPZL3Q6UWV2 235 aa11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 TC2NQ8N9U0 490 aa11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 OXER1Q8TDS5 423 aa11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 SMG7Q92540 1137 aaKnown RBP11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 SNF8Q96H20 258 aa11.24□□□□□ -0.61
CACNA1C-216ENST00000399638 GGA2Q9UJY4 613 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms