RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 MMP13P45452 471 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 TUSC3Q13454 348 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 PAGE2BQ5JRK9 111 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 TBC1D3GQ6DHY5 549 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 TBC1D3CQ6IPX1 549 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 TBC1D3Q8IZP1 549 aaPredicted RBP8.16□□□□□ -1.1
USP47-203ENST00000399455 QRFPRQ96P65 431 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 TBCBQ99426 244 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 GID8Q9NWU2 228 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 DEC1Q9P2X7 70 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 CTNNAL1Q9UBT7 734 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 GTF3C4Q9UKN8 822 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 PCDHA2Q9Y5H9 948 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 A0A1B0GUA9 196 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 TRPC5OSA6NMA1 111 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 FZD9O00144 591 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 TLX1P31314 330 aaPredicted RBP8.16□□□□□ -1.1
USP47-203ENST00000399455 PDE12Q6L8Q7 609 aaKnown RBP8.16□□□□□ -1.1
USP47-203ENST00000399455 AGMOQ6ZNB7 445 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 TRAPPC5Q8IUR0 188 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 CERS5Q8N5B7 392 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 HEXDCQ8WVB3 486 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 ZFYVE19Q96K21 471 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 PRKD2Q9BZL6 878 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 GANQ9H2C0 597 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 BCL2L12Q9HB09 334 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 MIEF1Q9NQG6 463 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 STOML1Q9UBI4 398 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 BAIAP2L1Q9UHR4 511 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 SMG5Q9UPR3 1016 aaKnown RBP8.16□□□□□ -1.1
USP47-203ENST00000399455 Q9Y3F1 56 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 RAD54BQ9Y620 910 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.16□□□□□ -1.1
USP47-203ENST00000399455 DNM1LO00429 736 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 SOCS7O14512 581 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 TIMM44O43615 452 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 FSHRP23945 695 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 PRIM2P49643 509 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 CCNG1P51959 295 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 SLC6A3Q01959 620 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 SRSF11Q05519 484 aaKnown RBP8.16□□□□□ -1.1
USP47-203ENST00000399455 RGS1Q08116 209 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 STK4Q13043 487 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 PPP1R15BQ5SWA1 713 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 FAM43BQ6ZT52 329 aaPredicted RBP8.16□□□□□ -1.1
USP47-203ENST00000399455 TSTD1Q8NFU3 115 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 USP7Q93009 1102 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 UBE2E3Q969T4 207 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 ELOVL2Q9NXB9 296 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 ERVW-1Q9UQF0 538 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 C2CD2Q9Y426 696 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 MON2Q7Z3U7 1717 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 SDR42E2A6NKP2 422 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 RAD51BO15315 384 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 SGPL1O95470 568 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 MMEP08473 750 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 RFX3P48380 749 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 TBC1D25Q3MII6 688 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 CBWD3Q5JTY5 395 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 CBWD5Q5RIA9 395 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 HORMAD1Q86X24 394 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 MAB21L3Q8N8X9 362 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 PCYOX1LQ8NBM8 494 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 B3GALNT2Q8NCR0 500 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 B4GALNT2Q8NHY0 566 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 CHAMP1Q96JM3 812 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 PCMTD2Q9NV79 361 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 DZANK1Q9NVP4 752 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 RBM22Q9NW64 420 aaKnown RBP eCLIP8.16□□□□□ -1.1
USP47-203ENST00000399455 ZFP69BQ9UJL9 534 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 PER2O15055 1255 aa8.15□□□□□ -1.1
USP47-203ENST00000399455 SLITRK3O94933 977 aa8.15□□□□□ -1.1
USP47-203ENST00000399455 FTH1P02794 183 aa8.15□□□□□ -1.1
USP47-203ENST00000399455 KRT4P19013 534 aa8.15□□□□□ -1.1
USP47-203ENST00000399455 PON1P27169 355 aa8.15□□□□□ -1.1
USP47-203ENST00000399455 C1QBPQ07021 282 aaKnown RBP8.15□□□□□ -1.1
USP47-203ENST00000399455 ATAD3BQ5T9A4 648 aa8.15□□□□□ -1.1
USP47-203ENST00000399455 FAM124AQ86V42 546 aa8.15□□□□□ -1.1
USP47-203ENST00000399455 JAMLQ86YT9 394 aa8.15□□□□□ -1.1
USP47-203ENST00000399455 RXFP2Q8WXD0 754 aa8.15□□□□□ -1.1
USP47-203ENST00000399455 TGS1Q96RS0 853 aaKnown RBP8.15□□□□□ -1.1
USP47-203ENST00000399455 TBL1YQ9BQ87 522 aa8.15□□□□□ -1.1
USP47-203ENST00000399455 NCDNQ9UBB6 729 aa8.15□□□□□ -1.1
USP47-203ENST00000399455 FAM86B1E9PN63 330 aa8.15□□□□□ -1.1
USP47-203ENST00000399455 FAM86B2P0C5J1 330 aa8.15□□□□□ -1.1
USP47-203ENST00000399455 KDSRQ06136 332 aa8.15□□□□□ -1.1
USP47-203ENST00000399455 LCA5Q86VQ0 697 aa8.15□□□□□ -1.1
USP47-203ENST00000399455 MAP4K3Q8IVH8 894 aa8.15□□□□□ -1.1
USP47-203ENST00000399455 CXorf38Q8TB03 319 aa8.15□□□□□ -1.1
USP47-203ENST00000399455 GNPTGQ9UJJ9 305 aa8.15□□□□□ -1.1
USP47-203ENST00000399455 ZNF142P52746 1687 aaPredicted RBP8.15□□□□□ -1.1
USP47-203ENST00000399455 SYN1P17600 705 aa8.15□□□□□ -1.1
USP47-203ENST00000399455 SLC9A1P19634 815 aa8.15□□□□□ -1.1
USP47-203ENST00000399455 NR1D1P20393 614 aa8.15□□□□□ -1.1
USP47-203ENST00000399455 COMTP21964 271 aa8.15□□□□□ -1.1
USP47-203ENST00000399455 OR1D2P34982 312 aa8.15□□□□□ -1.1
USP47-203ENST00000399455 SP2Q02086 613 aa8.15□□□□□ -1.1
USP47-203ENST00000399455 DSELQ8IZU8 1212 aa8.15□□□□□ -1.1
USP47-203ENST00000399455 FLCNQ8NFG4 579 aa8.15□□□□□ -1.1
USP47-203ENST00000399455 ACO2Q99798 780 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms