RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 BCCIPQ9P287 314 aaKnown RBP eCLIP15.49■□□□□ 0.07
SMIM11A-203ENST00000399299 AJAP1Q9UKB5 411 aaPredicted RBP15.49■□□□□ 0.07
SMIM11A-203ENST00000399299 TLR6Q9Y2C9 796 aa15.49■□□□□ 0.07
SMIM11A-203ENST00000399299 NFE2L3Q9Y4A8 694 aa15.49■□□□□ 0.07
SMIM11A-203ENST00000399299 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.49■□□□□ 0.07
SMIM11A-203ENST00000399299 LAMA1P25391 3075 aa15.48■□□□□ 0.07
SMIM11A-203ENST00000399299 IRAK2O43187 625 aa15.48■□□□□ 0.07
SMIM11A-203ENST00000399299 ACSL4O60488 711 aa15.48■□□□□ 0.07
SMIM11A-203ENST00000399299 GBP1P32455 592 aa15.48■□□□□ 0.07
SMIM11A-203ENST00000399299 SLC11A2P49281 568 aa15.48■□□□□ 0.07
SMIM11A-203ENST00000399299 BPIFB4P59827 614 aa15.48■□□□□ 0.07
SMIM11A-203ENST00000399299 ENPP2Q13822 863 aa15.48■□□□□ 0.07
SMIM11A-203ENST00000399299 GEN1Q17RS7 908 aa15.48■□□□□ 0.07
SMIM11A-203ENST00000399299 HSP90AA4PQ58FG1 418 aa15.48■□□□□ 0.07
SMIM11A-203ENST00000399299 MPP7Q5T2T1 576 aa15.48■□□□□ 0.07
SMIM11A-203ENST00000399299 FAM71AQ8IYT1 594 aa15.48■□□□□ 0.07
SMIM11A-203ENST00000399299 NETO1Q8TDF5 533 aa15.48■□□□□ 0.07
SMIM11A-203ENST00000399299 UCMAQ8WVF2 138 aa15.48■□□□□ 0.07
SMIM11A-203ENST00000399299 TMA16Q96EY4 203 aaKnown RBP15.48■□□□□ 0.07
SMIM11A-203ENST00000399299 SLC39A13Q96H72 371 aa15.48■□□□□ 0.07
SMIM11A-203ENST00000399299 POPDC2Q9HBU9 364 aa15.48■□□□□ 0.07
SMIM11A-203ENST00000399299 THAP10Q9P2Z0 257 aaPredicted RBP15.48■□□□□ 0.07
SMIM11A-203ENST00000399299 CDV3Q9UKY7 258 aaKnown RBP15.48■□□□□ 0.07
SMIM11A-203ENST00000399299 CKAP5Q14008 2032 aa15.48■□□□□ 0.07
SMIM11A-203ENST00000399299 TNRC6BQ9UPQ9 1833 aaKnown RBP15.47■□□□□ 0.07
SMIM11A-203ENST00000399299 FOXN3O00409 490 aaPredicted RBP15.47■□□□□ 0.07
SMIM11A-203ENST00000399299 MBD3O95983 291 aa15.47■□□□□ 0.07
SMIM11A-203ENST00000399299 GLI1P08151 1106 aa15.47■□□□□ 0.07
SMIM11A-203ENST00000399299 GABRG2P18507 467 aa15.47■□□□□ 0.07
SMIM11A-203ENST00000399299 BCKDHBP21953 392 aa15.47■□□□□ 0.07
SMIM11A-203ENST00000399299 CLCN1P35523 988 aa15.47■□□□□ 0.07
SMIM11A-203ENST00000399299 MPLP40238 635 aa15.47■□□□□ 0.07
SMIM11A-203ENST00000399299 WASP42768 502 aa15.47■□□□□ 0.07
SMIM11A-203ENST00000399299 YWHAZP63104 245 aaKnown RBP15.47■□□□□ 0.07
SMIM11A-203ENST00000399299 KCNMA1Q12791 1236 aa15.47■□□□□ 0.07
SMIM11A-203ENST00000399299 MAP7D1Q3KQU3 841 aa15.47■□□□□ 0.07
SMIM11A-203ENST00000399299 FAM133BQ5BKY9 247 aaKnown RBP15.47■□□□□ 0.07
SMIM11A-203ENST00000399299 SPDYCQ5MJ68 293 aa15.47■□□□□ 0.07
SMIM11A-203ENST00000399299 KLHDC7AQ5VTJ3 777 aa15.47■□□□□ 0.07
SMIM11A-203ENST00000399299 CDKAL1Q5VV42 579 aa15.47■□□□□ 0.07
SMIM11A-203ENST00000399299 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.47■□□□□ 0.07
SMIM11A-203ENST00000399299 ZNF557Q8N988 423 aaPredicted RBP15.47■□□□□ 0.07
SMIM11A-203ENST00000399299 WFIKKN2Q8TEU8 576 aa15.47■□□□□ 0.07
SMIM11A-203ENST00000399299 IPO4Q8TEX9 1081 aaKnown RBP15.47■□□□□ 0.07
SMIM11A-203ENST00000399299 FCRL2Q96LA5 508 aaPredicted RBP15.47■□□□□ 0.07
SMIM11A-203ENST00000399299 NOX5Q96PH1 765 aa15.47■□□□□ 0.07
SMIM11A-203ENST00000399299 DDX50Q9BQ39 737 aaKnown RBP15.47■□□□□ 0.07
SMIM11A-203ENST00000399299 VPS45Q9NRW7 570 aa15.47■□□□□ 0.07
SMIM11A-203ENST00000399299 ASNSD1Q9NWL6 643 aa15.47■□□□□ 0.07
SMIM11A-203ENST00000399299 ELOVL2Q9NXB9 296 aa15.47■□□□□ 0.07
SMIM11A-203ENST00000399299 CACNA2D2Q9NY47 1150 aa15.47■□□□□ 0.07
SMIM11A-203ENST00000399299 CLEC4EQ9ULY5 219 aa15.47■□□□□ 0.07
SMIM11A-203ENST00000399299 NAALADL1Q9UQQ1 740 aa15.47■□□□□ 0.07
SMIM11A-203ENST00000399299 INVSQ9Y283 1065 aa15.47■□□□□ 0.07
SMIM11A-203ENST00000399299 MUC22E2RYF6 1773 aaPredicted RBP15.47■□□□□ 0.07
SMIM11A-203ENST00000399299 BCLAF3A2AJT9 711 aaKnown RBP15.46■□□□□ 0.07
SMIM11A-203ENST00000399299 PES1O00541 588 aaKnown RBP15.46■□□□□ 0.07
SMIM11A-203ENST00000399299 CAPN9O14815 690 aa15.46■□□□□ 0.07
SMIM11A-203ENST00000399299 ZBTB24O43167 697 aaPredicted RBP15.46■□□□□ 0.07
SMIM11A-203ENST00000399299 TIMM44O43615 452 aa15.46■□□□□ 0.07
SMIM11A-203ENST00000399299 TSPAN3O60637 253 aa15.46■□□□□ 0.07
SMIM11A-203ENST00000399299 IGLV3-25P01717 112 aa15.46■□□□□ 0.07
SMIM11A-203ENST00000399299 KRT9P35527 623 aa15.46■□□□□ 0.07
SMIM11A-203ENST00000399299 SNX16P57768 344 aa15.46■□□□□ 0.07
SMIM11A-203ENST00000399299 PIK3R6Q5UE93 754 aa15.46■□□□□ 0.07
SMIM11A-203ENST00000399299 SYPL2Q5VXT5 272 aa15.46■□□□□ 0.07
SMIM11A-203ENST00000399299 KIAA0907Q7Z7F0 614 aaPredicted RBP15.46■□□□□ 0.07
SMIM11A-203ENST00000399299 TAC4Q86UU9 113 aa15.46■□□□□ 0.07
SMIM11A-203ENST00000399299 SLC47A2Q86VL8 602 aa15.46■□□□□ 0.07
SMIM11A-203ENST00000399299 PGBD3Q8N328 593 aa15.46■□□□□ 0.07
SMIM11A-203ENST00000399299 WDTC1Q8N5D0 677 aa15.46■□□□□ 0.07
SMIM11A-203ENST00000399299 PPP1R13BQ96KQ4 1090 aa15.46■□□□□ 0.07
SMIM11A-203ENST00000399299 CPXM1Q96SM3 734 aa15.46■□□□□ 0.07
SMIM11A-203ENST00000399299 RTKNQ9BST9 563 aa15.46■□□□□ 0.07
SMIM11A-203ENST00000399299 NAA15Q9BXJ9 866 aaKnown RBP15.46■□□□□ 0.07
SMIM11A-203ENST00000399299 PLCB1Q9NQ66 1216 aa15.46■□□□□ 0.07
SMIM11A-203ENST00000399299 ANO10Q9NW15 660 aa15.46■□□□□ 0.07
SMIM11A-203ENST00000399299 CALCOCO1Q9P1Z2 691 aa15.46■□□□□ 0.07
SMIM11A-203ENST00000399299 CEP83Q9Y592 693 aa15.46■□□□□ 0.07
SMIM11A-203ENST00000399299 FHOD1Q9Y613 1164 aa15.46■□□□□ 0.07
SMIM11A-203ENST00000399299 STON1Q9Y6Q2 735 aa15.46■□□□□ 0.07
SMIM11A-203ENST00000399299 CEP192Q8TEP8 1941 aa15.45■□□□□ 0.06
SMIM11A-203ENST00000399299 ZNF217O75362 1048 aa15.45■□□□□ 0.06
SMIM11A-203ENST00000399299 PNMA6AP0CW24 399 aaPredicted RBP15.45■□□□□ 0.06
SMIM11A-203ENST00000399299 UCHL3P15374 230 aa15.45■□□□□ 0.06
SMIM11A-203ENST00000399299 NDUFV2P19404 249 aa15.45■□□□□ 0.06
SMIM11A-203ENST00000399299 HLA-FP30511 346 aa15.45■□□□□ 0.06
SMIM11A-203ENST00000399299 CREB5Q02930 508 aa15.45■□□□□ 0.06
SMIM11A-203ENST00000399299 EIF4EBP2Q13542 120 aaPredicted RBP15.45■□□□□ 0.06
SMIM11A-203ENST00000399299 RAPGEF1Q13905 1077 aa15.45■□□□□ 0.06
SMIM11A-203ENST00000399299 STARD3Q14849 445 aa15.45■□□□□ 0.06
SMIM11A-203ENST00000399299 DRAP1Q14919 205 aaPredicted RBP15.45■□□□□ 0.06
SMIM11A-203ENST00000399299 KRT31Q15323 416 aa15.45■□□□□ 0.06
SMIM11A-203ENST00000399299 EFHC1Q5JVL4 640 aa15.45■□□□□ 0.06
SMIM11A-203ENST00000399299 KIAA1211LQ6NV74 962 aa15.45■□□□□ 0.06
SMIM11A-203ENST00000399299 SASS6Q6UVJ0 657 aa15.45■□□□□ 0.06
SMIM11A-203ENST00000399299 DGLUCYQ7Z3D6 616 aa15.45■□□□□ 0.06
SMIM11A-203ENST00000399299 PASD1Q8IV76 773 aa15.45■□□□□ 0.06
SMIM11A-203ENST00000399299 C12orf50Q8NA57 414 aaPredicted RBP15.45■□□□□ 0.06
SMIM11A-203ENST00000399299 HJURPQ8NCD3 748 aaPredicted RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms