RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 MLH1P40692 756 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 MMRN1Q13201 1228 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 NFYCQ13952 458 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 KCTD21Q4G0X4 260 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 DALRD3Q5D0E6 543 aaKnown RBP11.34□□□□□ -0.59
HPS4-202ENST00000398145 LLGL2Q6P1M3 1020 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 CES3Q6UWW8 571 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 TMC7Q7Z402 723 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 CHST13Q8NET6 341 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 FAM162AQ96A26 154 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 LENG1Q96BZ8 264 aaPredicted RBP11.34□□□□□ -0.59
HPS4-202ENST00000398145 CATSPERBQ9H7T0 1116 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 SIX2Q9NPC8 291 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 BARX2Q9UMQ3 279 aaPredicted RBP11.34□□□□□ -0.59
HPS4-202ENST00000398145 AK5Q9Y6K8 562 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 FAM208AQ9UK61 1670 aaKnown RBP11.34□□□□□ -0.59
HPS4-202ENST00000398145 PPP1R11O60927 126 aaPredicted RBP11.34□□□□□ -0.59
HPS4-202ENST00000398145 MTA2O94776 668 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 XPAP23025 273 aaPredicted RBP11.34□□□□□ -0.59
HPS4-202ENST00000398145 TTKP33981 857 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 GEMP55040 296 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 NME5P56597 212 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 CDC42EP1Q00587 391 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 FASTKQ14296 549 aaKnown RBP11.34□□□□□ -0.59
HPS4-202ENST00000398145 CSHL1Q14406 222 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 DMC1Q14565 340 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 KIZQ2M2Z5 673 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 SPANXN3Q5MJ09 141 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 CCDC81Q6ZN84 652 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 APOBEC3FQ8IUX4 373 aaKnown RBP11.34□□□□□ -0.59
HPS4-202ENST00000398145 ZFPM1Q8IX07 1006 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 FBXW8Q8N3Y1 598 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 THUMPD3Q9BV44 507 aaKnown RBP11.34□□□□□ -0.59
HPS4-202ENST00000398145 GPAMQ9HCL2 828 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 CCDC167Q9P0B6 97 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 COPG2Q9UBF2 871 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 PACSIN3Q9UKS6 424 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 SPATA31A5Q5VU36 1347 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 SPATA31A7Q8IWB4 1347 aa11.34□□□□□ -0.59
HPS4-202ENST00000398145 TMEM191CA6NGB0 347 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 MYO1GB0I1T2 1018 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 RNF103O00237 685 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 PEX1O43933 1283 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 NFAT5O94916 1531 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 RPL14P50914 215 aaKnown RBP11.33□□□□□ -0.6
HPS4-202ENST00000398145 NAGLUP54802 743 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 WDR4P57081 412 aaKnown RBP11.33□□□□□ -0.6
HPS4-202ENST00000398145 FASTKD3Q14CZ7 662 aaKnown RBP11.33□□□□□ -0.6
HPS4-202ENST00000398145 TTC7BQ86TV6 843 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 NKD2Q969F2 451 aaPredicted RBP11.33□□□□□ -0.6
HPS4-202ENST00000398145 ZNF333Q96JL9 665 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 ADGRA2Q96PE1 1338 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 TAS2R1Q9NYW7 299 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 DISP2A7MBM2 1401 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 RGSL1A5PLK6 1076 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 NCAM2O15394 837 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 OCM2P0CE71 109 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 OCMP0CE72 109 aaPredicted RBP11.33□□□□□ -0.6
HPS4-202ENST00000398145 CLCN3P51790 818 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 SV2CQ496J9 727 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 EMC10Q5UCC4 262 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 TDRD10Q5VZ19 366 aaKnown RBP11.33□□□□□ -0.6
HPS4-202ENST00000398145 CYP4X1Q8N118 509 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 SLC44A1Q8WWI5 657 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 EZH1Q92800 747 aaPredicted RBP11.33□□□□□ -0.6
HPS4-202ENST00000398145 C17orf80Q9BSJ5 609 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 SLC25A23Q9BV35 468 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 MRPS26Q9BYN8 205 aaKnown RBP11.33□□□□□ -0.6
HPS4-202ENST00000398145 SEMA6AQ9H2E6 1030 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 WDCPQ9H6R7 721 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 TRPC7Q9HCX4 862 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 XPNPEP3Q9NQH7 507 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 TMCO1Q9UM00 188 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 KCNK1O00180 336 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 MICAL2O94851 1124 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 FKBP9O95302 570 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 AMPD1P23109 780 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 BAG6P46379 1132 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 PTP4A2Q12974 167 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 NEDD8Q15843 81 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 AMHR2Q16671 573 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 C15orf52Q6ZUT6 534 aaKnown RBP11.33□□□□□ -0.6
HPS4-202ENST00000398145 FKBP9P1Q75LS8 142 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 KCNMB4Q86W47 210 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 PQLC1Q8N2U9 271 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 USP6NLQ92738 828 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 CASP10Q92851 521 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 EBNA1BP2Q99848 306 aaKnown RBP11.33□□□□□ -0.6
HPS4-202ENST00000398145 TRIM54Q9BYV2 358 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 S100A14Q9HCY8 104 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 SSU72Q9NP77 194 aaKnown RBP11.33□□□□□ -0.6
HPS4-202ENST00000398145 AP4B1Q9Y6B7 739 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 ASTN2O75129 1339 aaPredicted RBP11.33□□□□□ -0.6
HPS4-202ENST00000398145 INPP4BO15327 924 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 TCEA3O75764 348 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 SOAT2O75908 522 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 MMP8P22894 467 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 NDST1P52848 882 aa11.33□□□□□ -0.6
HPS4-202ENST00000398145 SPOUT1Q5T280 376 aaKnown RBP11.33□□□□□ -0.6
HPS4-202ENST00000398145 ADGRD1Q6QNK2 874 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms