RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 CORO1AP31146 461 aaKnown RBP24.51■■□□□ 1.51
TSPAN4-203ENST00000397397 ZNF77Q15935 545 aa24.51■■□□□ 1.51
TSPAN4-203ENST00000397397 TANGO2Q6ICL3 276 aa24.51■■□□□ 1.51
TSPAN4-203ENST00000397397 C17orf53Q8N3J3 647 aaPredicted RBP24.51■■□□□ 1.51
TSPAN4-203ENST00000397397 ATP6V0D2Q8N8Y2 350 aa24.51■■□□□ 1.51
TSPAN4-203ENST00000397397 RSPRY1Q96DX4 576 aa24.51■■□□□ 1.51
TSPAN4-203ENST00000397397 DCLK3Q9C098 648 aa24.51■■□□□ 1.51
TSPAN4-203ENST00000397397 TKTL2Q9H0I9 626 aa24.51■■□□□ 1.51
TSPAN4-203ENST00000397397 SLC12A6Q9UHW9 1150 aa24.51■■□□□ 1.51
TSPAN4-203ENST00000397397 USP18Q9UMW8 372 aa24.51■■□□□ 1.51
TSPAN4-203ENST00000397397 HEPACAM2A8MVW5 462 aa24.5■■□□□ 1.51
TSPAN4-203ENST00000397397 KCNU1A8MYU2 1149 aa24.5■■□□□ 1.51
TSPAN4-203ENST00000397397 SPOPO43791 374 aa24.5■■□□□ 1.51
TSPAN4-203ENST00000397397 PRPSAP2O60256 369 aa24.5■■□□□ 1.51
TSPAN4-203ENST00000397397 PARM1Q6UWI2 310 aa24.5■■□□□ 1.51
TSPAN4-203ENST00000397397 MTSS1LQ765P7 747 aa24.5■■□□□ 1.51
TSPAN4-203ENST00000397397 DENND1CQ8IV53 801 aa24.5■■□□□ 1.51
TSPAN4-203ENST00000397397 SYCE1Q8N0S2 351 aa24.5■■□□□ 1.51
TSPAN4-203ENST00000397397 CCDC185Q8N715 623 aa24.5■■□□□ 1.51
TSPAN4-203ENST00000397397 LRRC57Q8N9N7 239 aa24.5■■□□□ 1.51
TSPAN4-203ENST00000397397 RIN3Q8TB24 985 aa24.5■■□□□ 1.51
TSPAN4-203ENST00000397397 E2F7Q96AV8 911 aa24.5■■□□□ 1.51
TSPAN4-203ENST00000397397 KCND1Q9NSA2 647 aa24.5■■□□□ 1.51
TSPAN4-203ENST00000397397 ARHGEF38Q9NXL2 777 aa24.5■■□□□ 1.51
TSPAN4-203ENST00000397397 OBP2AQ9NY56 170 aa24.5■■□□□ 1.51
TSPAN4-203ENST00000397397 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.5■■□□□ 1.51
TSPAN4-203ENST00000397397 SCAMP3O14828 347 aaKnown RBP24.49■■□□□ 1.51
TSPAN4-203ENST00000397397 KLKB1P03952 638 aa24.49■■□□□ 1.51
TSPAN4-203ENST00000397397 TCF4P15884 667 aa24.49■■□□□ 1.51
TSPAN4-203ENST00000397397 HADHQ16836 314 aaKnown RBP24.49■■□□□ 1.51
TSPAN4-203ENST00000397397 ARL13BQ3SXY8 428 aa24.49■■□□□ 1.51
TSPAN4-203ENST00000397397 PLCD3Q8N3E9 789 aa24.49■■□□□ 1.51
TSPAN4-203ENST00000397397 ALS2CR12Q96Q35 445 aa24.49■■□□□ 1.51
TSPAN4-203ENST00000397397 PEBP4Q96S96 227 aa24.49■■□□□ 1.51
TSPAN4-203ENST00000397397 UHRF1Q96T88 793 aaPredicted RBP24.49■■□□□ 1.51
TSPAN4-203ENST00000397397 KXD1Q9BQD3 176 aa24.49■■□□□ 1.51
TSPAN4-203ENST00000397397 IRX2Q9BZI1 471 aaPredicted RBP24.49■■□□□ 1.51
TSPAN4-203ENST00000397397 E2F8A0AVK6 867 aa24.48■■□□□ 1.51
TSPAN4-203ENST00000397397 GREM1O60565 184 aa24.48■■□□□ 1.51
TSPAN4-203ENST00000397397 ADRA1BP35368 520 aa24.48■■□□□ 1.51
TSPAN4-203ENST00000397397 GJC1P36383 396 aa24.48■■□□□ 1.51
TSPAN4-203ENST00000397397 TAS2R40P59535 323 aa24.48■■□□□ 1.51
TSPAN4-203ENST00000397397 HTR3DQ70Z44 454 aa24.48■■□□□ 1.51
TSPAN4-203ENST00000397397 SLFN11Q7Z7L1 901 aa24.48■■□□□ 1.51
TSPAN4-203ENST00000397397 BPIFB1Q8TDL5 484 aa24.48■■□□□ 1.51
TSPAN4-203ENST00000397397 FGF14Q92915 247 aa24.48■■□□□ 1.51
TSPAN4-203ENST00000397397 ELSPBP1Q96BH3 223 aa24.48■■□□□ 1.51
TSPAN4-203ENST00000397397 BTN2A3PQ96KV6 586 aa24.48■■□□□ 1.51
TSPAN4-203ENST00000397397 LRRC3BQ96PB8 259 aa24.48■■□□□ 1.51
TSPAN4-203ENST00000397397 ZWILCHQ9H900 591 aa24.48■■□□□ 1.51
TSPAN4-203ENST00000397397 ANLNQ9NQW6 1124 aa24.48■■□□□ 1.51
TSPAN4-203ENST00000397397 TMPRSS4Q9NRS4 437 aa24.48■■□□□ 1.51
TSPAN4-203ENST00000397397 AGO1Q9UL18 857 aaKnown RBP24.48■■□□□ 1.51
TSPAN4-203ENST00000397397 ZNF510Q9Y2H8 683 aa24.48■■□□□ 1.51
TSPAN4-203ENST00000397397 ACSL4O60488 711 aa24.47■■□□□ 1.51
TSPAN4-203ENST00000397397 TNNT1P13805 278 aa24.47■■□□□ 1.51
TSPAN4-203ENST00000397397 IL1R2P27930 398 aa24.47■■□□□ 1.51
TSPAN4-203ENST00000397397 SLC11A2P49281 568 aa24.47■■□□□ 1.51
TSPAN4-203ENST00000397397 SLC25A11Q02978 314 aaKnown RBP24.47■■□□□ 1.51
TSPAN4-203ENST00000397397 VITQ6UXI7 678 aa24.47■■□□□ 1.51
TSPAN4-203ENST00000397397 Q6ZNB5 142 aa24.47■■□□□ 1.51
TSPAN4-203ENST00000397397 ZDHHC14Q8IZN3 488 aa24.47■■□□□ 1.51
TSPAN4-203ENST00000397397 NTAN1Q96AB6 310 aa24.47■■□□□ 1.51
TSPAN4-203ENST00000397397 PLA2G2FQ9BZM2 168 aa24.47■■□□□ 1.51
TSPAN4-203ENST00000397397 XPO7Q9UIA9 1087 aaKnown RBP24.47■■□□□ 1.51
TSPAN4-203ENST00000397397 FZD10Q9ULW2 581 aa24.47■■□□□ 1.51
TSPAN4-203ENST00000397397 ANHXE9PGG2 379 aa24.46■■□□□ 1.51
TSPAN4-203ENST00000397397 I6L893 689 aaPredicted RBP24.46■■□□□ 1.51
TSPAN4-203ENST00000397397 KIF5CO60282 957 aa24.46■■□□□ 1.51
TSPAN4-203ENST00000397397 PAGE1O75459 146 aa24.46■■□□□ 1.51
TSPAN4-203ENST00000397397 ECI2O75521 394 aa24.46■■□□□ 1.51
TSPAN4-203ENST00000397397 FTCDO95954 541 aa24.46■■□□□ 1.51
TSPAN4-203ENST00000397397 AIF1P55008 147 aa24.46■■□□□ 1.51
TSPAN4-203ENST00000397397 MTA1Q13330 715 aa24.46■■□□□ 1.51
TSPAN4-203ENST00000397397 HTR4Q13639 388 aa24.46■■□□□ 1.51
TSPAN4-203ENST00000397397 ERMARDQ5T6L9 678 aa24.46■■□□□ 1.51
TSPAN4-203ENST00000397397 PEX26Q7Z412 305 aa24.46■■□□□ 1.51
TSPAN4-203ENST00000397397 TRIM58Q8NG06 486 aa24.46■■□□□ 1.51
TSPAN4-203ENST00000397397 AZIN2Q96A70 460 aa24.46■■□□□ 1.51
TSPAN4-203ENST00000397397 GPATCH2LQ9NWQ4 482 aa24.46■■□□□ 1.51
TSPAN4-203ENST00000397397 AMFRQ9UKV5 643 aa24.46■■□□□ 1.51
TSPAN4-203ENST00000397397 NUMBLQ9Y6R0 609 aa24.46■■□□□ 1.51
TSPAN4-203ENST00000397397 LATS1O95835 1130 aa24.45■■□□□ 1.51
TSPAN4-203ENST00000397397 SMTNL2Q2TAL5 461 aa24.45■■□□□ 1.51
TSPAN4-203ENST00000397397 BOLA3Q53S33 107 aa24.45■■□□□ 1.51
TSPAN4-203ENST00000397397 EFHC2Q5JST6 749 aa24.45■■□□□ 1.51
TSPAN4-203ENST00000397397 TXNRD3NBQ6F5E7 133 aa24.45■■□□□ 1.51
TSPAN4-203ENST00000397397 CYP4V2Q6ZWL3 525 aaPredicted RBP24.45■■□□□ 1.51
TSPAN4-203ENST00000397397 NT5DC3Q86UY8 548 aa24.45■■□□□ 1.51
TSPAN4-203ENST00000397397 MFSD6LQ8IWD5 586 aa24.45■■□□□ 1.51
TSPAN4-203ENST00000397397 BBS7Q8IWZ6 715 aa24.45■■□□□ 1.51
TSPAN4-203ENST00000397397 YAF2Q8IY57 180 aa24.45■■□□□ 1.51
TSPAN4-203ENST00000397397 HAPLN3Q96S86 360 aa24.45■■□□□ 1.51
TSPAN4-203ENST00000397397 SNRNP25Q9BV90 132 aaKnown RBP24.45■■□□□ 1.51
TSPAN4-203ENST00000397397 SIK2Q9H0K1 926 aa24.45■■□□□ 1.51
TSPAN4-203ENST00000397397 THG1LQ9NWX6 298 aaKnown RBP24.45■■□□□ 1.51
TSPAN4-203ENST00000397397 LIMD1Q9UGP4 676 aa24.45■■□□□ 1.51
TSPAN4-203ENST00000397397 AP4E1Q9UPM8 1137 aa24.45■■□□□ 1.51
TSPAN4-203ENST00000397397 SCAPQ12770 1279 aa24.44■■□□□ 1.5
TSPAN4-203ENST00000397397 KCNT1Q5JUK3 1230 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms