RNA–Protein interactions for RNA: ENST00000397345.7

NEB-203, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-203ENST00000397345 TMEM109Q9BVC6 243 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 ZCCHC2Q9C0B9 1178 aaKnown RBP2.6□□□□□ -1.99
NEB-203ENST00000397345 SLC6A16Q9GZN6 736 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 CAAP1Q9H8G2 361 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 PRPSAP2O60256 369 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 REM1O75628 298 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 CTDSPL2Q05D32 466 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 DPY19L1Q2PZI1 675 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 FBXO43Q4G163 708 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 ZNF574Q6ZN55 896 aaPredicted RBP2.6□□□□□ -1.99
NEB-203ENST00000397345 ADCK1Q86TW2 530 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 GALNT12Q8IXK2 581 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 MAGEB6Q8N7X4 407 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 XAGE3Q8WTP9 111 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 MMS19Q96T76 1030 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 TRIM9Q9C026 710 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 SARS2Q9NP81 518 aaKnown RBP2.6□□□□□ -1.99
NEB-203ENST00000397345 ITM2CQ9NQX7 267 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 CYP3A7-CYP3A51PA0A087WV96 503 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 GNPATO15228 680 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 CYP3A7P24462 503 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 HNF1BP35680 557 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 SMAD4Q13485 552 aaKnown RBP2.6□□□□□ -1.99
NEB-203ENST00000397345 ACOX1Q15067 660 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 TRIM65Q6PJ69 517 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 RRM2BQ7LG56 351 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 RBBP8NLQ8NC74 664 aaPredicted RBP2.6□□□□□ -1.99
NEB-203ENST00000397345 ARID1BQ8NFD5 2236 aaPredicted RBP2.6□□□□□ -1.99
NEB-203ENST00000397345 SNF8Q96H20 258 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 PLGRKTQ9HBL7 147 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 ASIC3Q9UHC3 531 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 MTMR6Q9Y217 621 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 DMTF1Q9Y222 760 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 RPH3AQ9Y2J0 694 aaPredicted RBP2.6□□□□□ -1.99
NEB-203ENST00000397345 ASTN2O75129 1339 aaPredicted RBP2.6□□□□□ -1.99
NEB-203ENST00000397345 MUSKO15146 869 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 GPR182O15218 404 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 RECQL5O94762 991 aaPredicted RBP2.6□□□□□ -1.99
NEB-203ENST00000397345 EYA4O95677 639 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 PDGFRBP09619 1106 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 HRH2P25021 359 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 NAMPTP43490 491 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 PRAMEP78395 509 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 RSBN1LQ6PCB5 846 aaPredicted RBP2.6□□□□□ -1.99
NEB-203ENST00000397345 PADI6Q6TGC4 694 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.6□□□□□ -1.99
NEB-203ENST00000397345 SLC44A2Q8IWA5 706 aaPredicted RBP2.6□□□□□ -1.99
NEB-203ENST00000397345 AMER2Q8N7J2 671 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 CHKBQ9Y259 395 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 METP08581 1390 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 KCNJ18B7U540 433 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 ZNF701M0R085 212 aaPredicted RBP2.6□□□□□ -1.99
NEB-203ENST00000397345 NPC1O15118 1278 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 BEST1O76090 585 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 FKBP2P26885 142 aaKnown RBP2.6□□□□□ -1.99
NEB-203ENST00000397345 KCNJ12Q14500 433 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 PTPN20Q4JDL3 420 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 KANK2Q63ZY3 851 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 PROSER1Q86XN7 944 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 FBXL21Q9UKT6 434 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 PRPF19Q9UMS4 504 aaKnown RBP2.6□□□□□ -1.99
NEB-203ENST00000397345 TMED5Q9Y3A6 229 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 CLVS2Q5SYC1 327 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 TMEM63BQ5T3F8 832 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 IRAK1BP1Q5VVH5 260 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 TRPM8Q7Z2W7 1104 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 DEFB132Q7Z7B7 95 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 SATL1Q86VE3 508 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 VRK1Q99986 396 aaPredicted RBP2.6□□□□□ -1.99
NEB-203ENST00000397345 LDHAL6BQ9BYZ2 381 aaPredicted RBP2.6□□□□□ -1.99
NEB-203ENST00000397345 LRRC40Q9H9A6 602 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 ZNF556Q9HAH1 456 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 RAB9BQ9NP90 201 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 SETD4Q9NVD3 440 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 UXTQ9UBK9 157 aaPredicted RBP2.6□□□□□ -1.99
NEB-203ENST00000397345 PGAP2Q9UHJ9 254 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 MAGEC1O60732 1142 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 SPATA31D3P0C874 917 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 INPP1P49441 399 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 PTP4A2Q12974 167 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 ERICH5Q6P6B1 374 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 B3GNT6Q6ZMB0 384 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 SPATA31D4Q6ZUB0 917 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 ZNF410Q86VK4 478 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 SYTL1Q8IYJ3 562 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 DQX1Q8TE96 717 aaKnown RBP2.6□□□□□ -1.99
NEB-203ENST00000397345 CPNE2Q96FN4 548 aaPredicted RBP2.6□□□□□ -1.99
NEB-203ENST00000397345 TTYH1Q9H313 450 aaPredicted RBP2.6□□□□□ -1.99
NEB-203ENST00000397345 PCDHB16Q9NRJ7 776 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 LRCH1Q9Y2L9 728 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 PCDHA10Q9Y5I2 948 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 ALDH2P05091 517 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 TCEA1P23193 301 aaKnown RBP2.6□□□□□ -1.99
NEB-203ENST00000397345 DPP6P42658 865 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 IL12RB1P42701 662 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 C6orf132Q5T0Z8 1188 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 TTBK2Q6IQ55 1244 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 FAM228AQ86W67 206 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 FAM20CQ8IXL6 584 aa2.6□□□□□ -1.99
NEB-203ENST00000397345 DCAKDQ8WVC6 231 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms