RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 SERPINB12Q96P63 405 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 NR1H4Q96RI1 486 aaPredicted RBP5.56□□□□□ -1.52
VPS41-203ENST00000395969 ACBD6Q9BR61 282 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 IER2Q9BTL4 223 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 SNTG2Q9NY99 539 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 CHKBQ9Y259 395 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 STARD13Q9Y3M8 1113 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 COMMD3-BMI1R4GMX3 469 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 SOBPA7XYQ1 873 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 APOC4-APOC2K7ER74 178 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 ENTPD5O75356 428 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 APOC2P02655 101 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 POU2F2P09086 479 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 ZFXP17010 805 aaPredicted RBP5.55□□□□□ -1.52
VPS41-203ENST00000395969 DNAJB1P25685 340 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 TAF6P49848 677 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 PLTPP55058 493 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 DEUP1Q05D60 604 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 MPP2Q14168 576 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 RCN2Q14257 317 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 KPNB1Q14974 876 aaKnown RBP5.55□□□□□ -1.52
VPS41-203ENST00000395969 DAB2IPQ5VWQ8 1189 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 MSANTD2Q6P1R3 559 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 DENND1BQ6P3S1 775 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 SPOCD1Q6ZMY3 1216 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 CCNJLQ8IV13 435 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 TMEM192Q8IY95 271 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 C18orf8Q96DM3 657 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 TNIP3Q96KP6 325 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 SUSD3Q96L08 255 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 TGS1Q96RS0 853 aaKnown RBP5.55□□□□□ -1.52
VPS41-203ENST00000395969 DUSP16Q9BY84 665 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 TRIM31Q9BZY9 425 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 RSAD1Q9HA92 442 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 NMRK2Q9NPI5 230 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 OGDHLQ9ULD0 1010 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.55□□□□□ -1.52
VPS41-203ENST00000395969 INO80B-WBP1J3KQ70 363 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 HAX1O00165 279 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 PFDN1O60925 122 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 LRCH4O75427 683 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 CCDC166P0CW27 439 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 SRGAP2CP0DJJ0 459 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 CREB1P16220 341 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 NDUFV2P19404 249 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 TAC1P20366 129 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 TARSP26639 723 aaKnown RBP5.55□□□□□ -1.52
VPS41-203ENST00000395969 EPHB2P29323 1055 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 STIP1P31948 543 aaKnown RBP5.55□□□□□ -1.52
VPS41-203ENST00000395969 VCPP55072 806 aaKnown RBP5.55□□□□□ -1.52
VPS41-203ENST00000395969 SH3BGRP55822 239 aaPredicted RBP5.55□□□□□ -1.52
VPS41-203ENST00000395969 CDK16Q00536 496 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 CACNB2Q08289 660 aaPredicted RBP5.55□□□□□ -1.52
VPS41-203ENST00000395969 NFX1Q12986 1120 aaKnown RBP5.55□□□□□ -1.52
VPS41-203ENST00000395969 P3H1Q32P28 736 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 KHDC1Q4VXA5 237 aaKnown RBP5.55□□□□□ -1.52
VPS41-203ENST00000395969 ZNF280DQ6N043 979 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 C4orf50Q6ZRC1 276 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 CCDC89Q8N998 374 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 LRRC8CQ8TDW0 803 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 TRAPPC12Q8WVT3 735 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 SCG3Q8WXD2 468 aaKnown RBP5.55□□□□□ -1.52
VPS41-203ENST00000395969 ARHGEF2Q92974 986 aaKnown RBP5.55□□□□□ -1.52
VPS41-203ENST00000395969 LRRC39Q96DD0 335 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 PGBD4Q96DM1 585 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 FUBP3Q96I24 572 aaKnown RBP eCLIP5.55□□□□□ -1.52
VPS41-203ENST00000395969 TTC25Q96NG3 672 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 UIMC1Q96RL1 719 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 NPY6RQ99463 290 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 PI4K2AQ9BTU6 479 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 CNGB3Q9NQW8 809 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 AAASQ9NRG9 546 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 HAO1Q9UJM8 370 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 CCDC85CA6NKD9 419 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 KPNA7A9QM74 516 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 SYN3O14994 580 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 DGKIO75912 1065 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 RECQL4O94761 1208 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 ITGB3P05106 788 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 RARBP10826 455 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 IL4RP24394 825 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 DNAJB2P25686 324 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 ATP5DP30049 168 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 SLCO1A2P46721 670 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 RPL21P46778 160 aaKnown RBP5.55□□□□□ -1.52
VPS41-203ENST00000395969 RASSF2P50749 326 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 LILRA4P59901 499 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 ADCY1Q08828 1119 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 AP1B1Q10567 949 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 BTG3Q14201 252 aaPredicted RBP5.55□□□□□ -1.52
VPS41-203ENST00000395969 PAFAH1B3Q15102 231 aaKnown RBP5.55□□□□□ -1.52
VPS41-203ENST00000395969 NOMO1Q15155 1222 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 MAPRE1Q15691 268 aaKnown RBP5.55□□□□□ -1.52
VPS41-203ENST00000395969 OTUD1Q5VV17 481 aaPredicted RBP5.55□□□□□ -1.52
VPS41-203ENST00000395969 GDF6Q6KF10 455 aaPredicted RBP5.55□□□□□ -1.52
VPS41-203ENST00000395969 PAQR9Q6ZVX9 377 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 RDH13Q8NBN7 331 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 OVCA2Q8WZ82 227 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 ERP27Q96DN0 273 aa5.55□□□□□ -1.52
VPS41-203ENST00000395969 SNF8Q96H20 258 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms