RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 ADGRD2Q7Z7M1 963 aa21.15■□□□□ 0.98
VCPKMT-202ENST00000395860 TMEM150AQ86TG1 271 aa21.15■□□□□ 0.98
VCPKMT-202ENST00000395860 HS6ST3Q8IZP7 471 aa21.15■□□□□ 0.98
VCPKMT-202ENST00000395860 TTC13Q8NBP0 860 aa21.15■□□□□ 0.98
VCPKMT-202ENST00000395860 PCDH19Q8TAB3 1148 aa21.15■□□□□ 0.98
VCPKMT-202ENST00000395860 TIFAQ96CG3 184 aa21.15■□□□□ 0.98
VCPKMT-202ENST00000395860 RUNDC3BQ96NL0 473 aa21.15■□□□□ 0.98
VCPKMT-202ENST00000395860 HAPLN3Q96S86 360 aa21.15■□□□□ 0.98
VCPKMT-202ENST00000395860 FAM118BQ9BPY3 351 aa21.15■□□□□ 0.98
VCPKMT-202ENST00000395860 IL21Q9HBE4 155 aa21.15■□□□□ 0.98
VCPKMT-202ENST00000395860 OR12D3Q9UGF7 316 aa21.15■□□□□ 0.98
VCPKMT-202ENST00000395860 DPP7Q9UHL4 492 aa21.15■□□□□ 0.98
VCPKMT-202ENST00000395860 EPOPA6NHQ4 379 aa21.14■□□□□ 0.97
VCPKMT-202ENST00000395860 KCNU1A8MYU2 1149 aa21.14■□□□□ 0.97
VCPKMT-202ENST00000395860 COCHO43405 550 aa21.14■□□□□ 0.97
VCPKMT-202ENST00000395860 RAD51CO43502 376 aa21.14■□□□□ 0.97
VCPKMT-202ENST00000395860 PAGE1O75459 146 aa21.14■□□□□ 0.97
VCPKMT-202ENST00000395860 HMBSP08397 361 aa21.14■□□□□ 0.97
VCPKMT-202ENST00000395860 GABRR2P28476 465 aa21.14■□□□□ 0.97
VCPKMT-202ENST00000395860 COILP38432 576 aaPredicted RBP21.14■□□□□ 0.97
VCPKMT-202ENST00000395860 FNTAP49354 379 aa21.14■□□□□ 0.97
VCPKMT-202ENST00000395860 MAATS1Q7Z4T9 603 aa21.14■□□□□ 0.97
VCPKMT-202ENST00000395860 CCDC105Q8IYK2 499 aa21.14■□□□□ 0.97
VCPKMT-202ENST00000395860 PQLC3Q8N755 202 aa21.14■□□□□ 0.97
VCPKMT-202ENST00000395860 HDAC7Q8WUI4 952 aa21.14■□□□□ 0.97
VCPKMT-202ENST00000395860 SIK2Q9H0K1 926 aa21.14■□□□□ 0.97
VCPKMT-202ENST00000395860 OSBPL2Q9H1P3 480 aa21.14■□□□□ 0.97
VCPKMT-202ENST00000395860 TLE6Q9H808 572 aa21.14■□□□□ 0.97
VCPKMT-202ENST00000395860 ANKZF1Q9H8Y5 726 aa21.14■□□□□ 0.97
VCPKMT-202ENST00000395860 ASAH2Q9NR71 780 aa21.14■□□□□ 0.97
VCPKMT-202ENST00000395860 HBS1LQ9Y450 684 aaKnown RBP21.14■□□□□ 0.97
VCPKMT-202ENST00000395860 C2orf78A6NCI8 922 aa21.13■□□□□ 0.97
VCPKMT-202ENST00000395860 SPDYE4A6NLX3 237 aa21.13■□□□□ 0.97
VCPKMT-202ENST00000395860 FAM72CH0Y354 149 aa21.13■□□□□ 0.97
VCPKMT-202ENST00000395860 APOC4-APOC2K7ER74 178 aa21.13■□□□□ 0.97
VCPKMT-202ENST00000395860 RFPL2O75678 378 aa21.13■□□□□ 0.97
VCPKMT-202ENST00000395860 APOC2P02655 101 aa21.13■□□□□ 0.97
VCPKMT-202ENST00000395860 ZNF135P52742 658 aaPredicted RBP21.13■□□□□ 0.97
VCPKMT-202ENST00000395860 TPI1P60174 286 aa21.13■□□□□ 0.97
VCPKMT-202ENST00000395860 RING1Q06587 406 aa21.13■□□□□ 0.97
VCPKMT-202ENST00000395860 SEMA3BQ13214 749 aa21.13■□□□□ 0.97
VCPKMT-202ENST00000395860 FAM72AQ5TYM5 149 aa21.13■□□□□ 0.97
VCPKMT-202ENST00000395860 SLC9A4Q6AI14 798 aa21.13■□□□□ 0.97
VCPKMT-202ENST00000395860 FAM72DQ6L9T8 149 aa21.13■□□□□ 0.97
VCPKMT-202ENST00000395860 TTC27Q6P3X3 843 aa21.13■□□□□ 0.97
VCPKMT-202ENST00000395860 ELMSAN1Q6PJG2 1045 aa21.13■□□□□ 0.97
VCPKMT-202ENST00000395860 FAM72BQ86X60 149 aa21.13■□□□□ 0.97
VCPKMT-202ENST00000395860 TMC8Q8IU68 726 aa21.13■□□□□ 0.97
VCPKMT-202ENST00000395860 ATP6V0D2Q8N8Y2 350 aa21.13■□□□□ 0.97
VCPKMT-202ENST00000395860 EPAS1Q99814 870 aa21.13■□□□□ 0.97
VCPKMT-202ENST00000395860 CORO1BQ9BR76 489 aa21.13■□□□□ 0.97
VCPKMT-202ENST00000395860 LRRC3Q9BY71 257 aa21.13■□□□□ 0.97
VCPKMT-202ENST00000395860 SLC12A6Q9UHW9 1150 aa21.13■□□□□ 0.97
VCPKMT-202ENST00000395860 HCFC2Q9Y5Z7 792 aa21.13■□□□□ 0.97
VCPKMT-202ENST00000395860 DAPK3O43293 454 aa21.13■□□□□ 0.97
VCPKMT-202ENST00000395860 OAS1P00973 400 aaKnown RBP21.13■□□□□ 0.97
VCPKMT-202ENST00000395860 ZFXP17010 805 aaPredicted RBP21.13■□□□□ 0.97
VCPKMT-202ENST00000395860 TGM2P21980 687 aa21.13■□□□□ 0.97
VCPKMT-202ENST00000395860 AMPD1P23109 780 aa21.13■□□□□ 0.97
VCPKMT-202ENST00000395860 HOXA9P31269 272 aa21.13■□□□□ 0.97
VCPKMT-202ENST00000395860 SLC7A5Q01650 507 aa21.13■□□□□ 0.97
VCPKMT-202ENST00000395860 DR1Q01658 176 aa21.13■□□□□ 0.97
VCPKMT-202ENST00000395860 OTUD4Q01804 1114 aaKnown RBP21.13■□□□□ 0.97
VCPKMT-202ENST00000395860 DHX34Q14147 1143 aaKnown RBP21.13■□□□□ 0.97
VCPKMT-202ENST00000395860 ACTL9Q8TC94 416 aa21.13■□□□□ 0.97
VCPKMT-202ENST00000395860 P3H4Q92791 437 aa21.13■□□□□ 0.97
VCPKMT-202ENST00000395860 GCNAQ96QF7 691 aa21.13■□□□□ 0.97
VCPKMT-202ENST00000395860 TRPC7Q9HCX4 862 aa21.13■□□□□ 0.97
VCPKMT-202ENST00000395860 SAE1Q9UBE0 346 aaPredicted RBP21.13■□□□□ 0.97
VCPKMT-202ENST00000395860 PCYOX1Q9UHG3 505 aa21.13■□□□□ 0.97
VCPKMT-202ENST00000395860 SNX10Q9Y5X0 201 aa21.13■□□□□ 0.97
VCPKMT-202ENST00000395860 MYO7AQ13402 2215 aa21.12■□□□□ 0.97
VCPKMT-202ENST00000395860 IGLV3-27P01718 113 aa21.12■□□□□ 0.97
VCPKMT-202ENST00000395860 HNRNPA1P09651 372 aaKnown RBP eCLIP21.12■□□□□ 0.97
VCPKMT-202ENST00000395860 MYL4P12829 197 aa21.12■□□□□ 0.97
VCPKMT-202ENST00000395860 CDC25CP30307 473 aa21.12■□□□□ 0.97
VCPKMT-202ENST00000395860 KCNJ1P48048 391 aa21.12■□□□□ 0.97
VCPKMT-202ENST00000395860 SMAD3P84022 425 aaKnown RBP21.12■□□□□ 0.97
VCPKMT-202ENST00000395860 RFX8Q6ZV50 586 aa21.12■□□□□ 0.97
VCPKMT-202ENST00000395860 PLD5Q8N7P1 536 aa21.12■□□□□ 0.97
VCPKMT-202ENST00000395860 MRPS31Q92665 395 aaKnown RBP21.12■□□□□ 0.97
VCPKMT-202ENST00000395860 FRMD8P1Q9BZ68 369 aaPredicted RBP21.12■□□□□ 0.97
VCPKMT-202ENST00000395860 PRDM16Q9HAZ2 1276 aa21.12■□□□□ 0.97
VCPKMT-202ENST00000395860 ARHGEF4Q9NR80 690 aa21.12■□□□□ 0.97
VCPKMT-202ENST00000395860 CHD9Q3L8U1 2897 aa21.12■□□□□ 0.97
VCPKMT-202ENST00000395860 CHD7Q9P2D1 2997 aa21.12■□□□□ 0.97
VCPKMT-202ENST00000395860 TARSL2A2RTX5 802 aaKnown RBP21.11■□□□□ 0.97
VCPKMT-202ENST00000395860 TTI1O43156 1089 aa21.11■□□□□ 0.97
VCPKMT-202ENST00000395860 LIASO43766 372 aa21.11■□□□□ 0.97
VCPKMT-202ENST00000395860 PECAM1P16284 738 aaPredicted RBP21.11■□□□□ 0.97
VCPKMT-202ENST00000395860 PTPN2P17706 415 aa21.11■□□□□ 0.97
VCPKMT-202ENST00000395860 GGCXP38435 758 aa21.11■□□□□ 0.97
VCPKMT-202ENST00000395860 HCAR3P49019 387 aa21.11■□□□□ 0.97
VCPKMT-202ENST00000395860 COG7P83436 770 aa21.11■□□□□ 0.97
VCPKMT-202ENST00000395860 NUGGCQ68CJ6 796 aa21.11■□□□□ 0.97
VCPKMT-202ENST00000395860 C1orf228Q6PIY5 440 aa21.11■□□□□ 0.97
VCPKMT-202ENST00000395860 NPNTQ6UXI9 565 aa21.11■□□□□ 0.97
VCPKMT-202ENST00000395860 CHRDL2Q6WN34 429 aa21.11■□□□□ 0.97
VCPKMT-202ENST00000395860 GAREM2Q75VX8 874 aa21.11■□□□□ 0.97
VCPKMT-202ENST00000395860 BTN2A3PQ96KV6 586 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms