RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 TXNRD2Q9NNW7 524 aa13.62□□□□□ -0.23
NFKB1-202ENST00000394820 SAR1AQ9NR31 198 aa13.62□□□□□ -0.23
NFKB1-202ENST00000394820 GREB1LQ9C091 1923 aaPredicted RBP13.62□□□□□ -0.23
NFKB1-202ENST00000394820 PHGDHO43175 533 aaKnown RBP13.62□□□□□ -0.23
NFKB1-202ENST00000394820 RALBP11234 206 aa13.62□□□□□ -0.23
NFKB1-202ENST00000394820 C1QBPQ07021 282 aaKnown RBP13.62□□□□□ -0.23
NFKB1-202ENST00000394820 CXorf38Q8TB03 319 aa13.62□□□□□ -0.23
NFKB1-202ENST00000394820 MPHOSPH6Q99547 160 aaKnown RBP13.62□□□□□ -0.23
NFKB1-202ENST00000394820 LPIN3Q9BQK8 851 aa13.62□□□□□ -0.23
NFKB1-202ENST00000394820 CCDC134Q9H6E4 229 aa13.62□□□□□ -0.23
NFKB1-202ENST00000394820 RSAD1Q9HA92 442 aa13.62□□□□□ -0.23
NFKB1-202ENST00000394820 KLK14Q9P0G3 267 aa13.62□□□□□ -0.23
NFKB1-202ENST00000394820 MAFBQ9Y5Q3 323 aaPredicted RBP13.62□□□□□ -0.23
NFKB1-202ENST00000394820 NFICP08651 508 aa13.61□□□□□ -0.23
NFKB1-202ENST00000394820 SRGAP2BP0DMP2 458 aa13.61□□□□□ -0.23
NFKB1-202ENST00000394820 KIF19Q2TAC6 998 aa13.61□□□□□ -0.23
NFKB1-202ENST00000394820 HSP90AA5PQ58FG0 334 aa13.61□□□□□ -0.23
NFKB1-202ENST00000394820 DCAF6Q58WW2 860 aa13.61□□□□□ -0.23
NFKB1-202ENST00000394820 SPDYAQ5MJ70 313 aa13.61□□□□□ -0.23
NFKB1-202ENST00000394820 MAP3K21Q5TCX8 1036 aa13.61□□□□□ -0.23
NFKB1-202ENST00000394820 RBM44Q6ZP01 1051 aaKnown RBP13.61□□□□□ -0.23
NFKB1-202ENST00000394820 ASRGL1Q7L266 308 aa13.61□□□□□ -0.23
NFKB1-202ENST00000394820 NRG4Q8WWG1 115 aa13.61□□□□□ -0.23
NFKB1-202ENST00000394820 EZH1Q92800 747 aaPredicted RBP13.61□□□□□ -0.23
NFKB1-202ENST00000394820 OPTNQ96CV9 577 aa13.61□□□□□ -0.23
NFKB1-202ENST00000394820 LGMNQ99538 433 aa13.61□□□□□ -0.23
NFKB1-202ENST00000394820 OMDQ99983 421 aa13.61□□□□□ -0.23
NFKB1-202ENST00000394820 MINDY3Q9H8M7 445 aa13.61□□□□□ -0.23
NFKB1-202ENST00000394820 SNCAIPQ9Y6H5 919 aa13.61□□□□□ -0.23
NFKB1-202ENST00000394820 GOLGA8CPA6NN73 597 aa13.61□□□□□ -0.23
NFKB1-202ENST00000394820 CCNB1P14635 433 aa13.61□□□□□ -0.23
NFKB1-202ENST00000394820 ACO1P21399 889 aaKnown RBP13.61□□□□□ -0.23
NFKB1-202ENST00000394820 GPD1P21695 349 aa13.61□□□□□ -0.23
NFKB1-202ENST00000394820 ARL2P36404 184 aa13.61□□□□□ -0.23
NFKB1-202ENST00000394820 CDKN2BP42772 138 aa13.61□□□□□ -0.23
NFKB1-202ENST00000394820 IREB2P48200 963 aaKnown RBP13.61□□□□□ -0.23
NFKB1-202ENST00000394820 GALK1P51570 392 aa13.61□□□□□ -0.23
NFKB1-202ENST00000394820 CACNB2Q08289 660 aaPredicted RBP13.61□□□□□ -0.23
NFKB1-202ENST00000394820 PDK1Q15118 436 aa13.61□□□□□ -0.23
NFKB1-202ENST00000394820 TRMT5Q32P41 509 aaKnown RBP13.61□□□□□ -0.23
NFKB1-202ENST00000394820 RHBDF2Q6PJF5 856 aa13.61□□□□□ -0.23
NFKB1-202ENST00000394820 ZNF677Q86XU0 584 aa13.61□□□□□ -0.23
NFKB1-202ENST00000394820 OR6Y1Q8NGX8 325 aa13.61□□□□□ -0.23
NFKB1-202ENST00000394820 PAK5Q9P286 719 aa13.61□□□□□ -0.23
NFKB1-202ENST00000394820 TPP1O14773 563 aa13.61□□□□□ -0.23
NFKB1-202ENST00000394820 AKAP10O43572 662 aa13.61□□□□□ -0.23
NFKB1-202ENST00000394820 AMHP03971 560 aa13.61□□□□□ -0.23
NFKB1-202ENST00000394820 MMP8P22894 467 aa13.61□□□□□ -0.23
NFKB1-202ENST00000394820 METTL7BQ6UX53 244 aa13.61□□□□□ -0.23
NFKB1-202ENST00000394820 LBX2Q6XYB7 198 aa13.61□□□□□ -0.23
NFKB1-202ENST00000394820 MPP5Q8N3R9 675 aa13.61□□□□□ -0.23
NFKB1-202ENST00000394820 EMID1Q96A84 441 aaPredicted RBP13.61□□□□□ -0.23
NFKB1-202ENST00000394820 FOXP3Q9BZS1 431 aa13.61□□□□□ -0.23
NFKB1-202ENST00000394820 LIN28AQ9H9Z2 209 aaKnown RBP13.61□□□□□ -0.23
NFKB1-202ENST00000394820 C9JVG2 144 aa13.6□□□□□ -0.23
NFKB1-202ENST00000394820 ITM2AO43736 263 aa13.6□□□□□ -0.23
NFKB1-202ENST00000394820 ZC3H11AO75152 810 aaKnown RBP eCLIP13.6□□□□□ -0.23
NFKB1-202ENST00000394820 SKIV2L2P42285 1042 aaKnown RBP13.6□□□□□ -0.23
NFKB1-202ENST00000394820 OAZ1P54368 228 aa13.6□□□□□ -0.23
NFKB1-202ENST00000394820 RARS2Q5T160 578 aaKnown RBP13.6□□□□□ -0.23
NFKB1-202ENST00000394820 KCNT2Q6UVM3 1135 aa13.6□□□□□ -0.23
NFKB1-202ENST00000394820 BRSK2Q8IWQ3 736 aa13.6□□□□□ -0.23
NFKB1-202ENST00000394820 OLFM3Q96PB7 478 aa13.6□□□□□ -0.23
NFKB1-202ENST00000394820 GORASP1Q9BQQ3 440 aa13.6□□□□□ -0.23
NFKB1-202ENST00000394820 HMGXB4Q9UGU5 601 aa13.6□□□□□ -0.23
NFKB1-202ENST00000394820 NFASCO94856 1347 aa13.6□□□□□ -0.23
NFKB1-202ENST00000394820 COL2A1P02458 1487 aaPredicted RBP13.6□□□□□ -0.23
NFKB1-202ENST00000394820 NOL3O60936 208 aaKnown RBP13.6□□□□□ -0.23
NFKB1-202ENST00000394820 GRIK3Q13003 919 aa13.6□□□□□ -0.23
NFKB1-202ENST00000394820 CDC16Q13042 620 aa13.6□□□□□ -0.23
NFKB1-202ENST00000394820 USP10Q14694 798 aaKnown RBP13.6□□□□□ -0.23
NFKB1-202ENST00000394820 DLG2Q15700 870 aa13.6□□□□□ -0.23
NFKB1-202ENST00000394820 GOLGA7BQ2TAP0 167 aa13.6□□□□□ -0.23
NFKB1-202ENST00000394820 IER5Q5VY09 327 aa13.6□□□□□ -0.23
NFKB1-202ENST00000394820 JADE1Q6IE81 842 aa13.6□□□□□ -0.23
NFKB1-202ENST00000394820 AMIGO2Q86SJ2 522 aa13.6□□□□□ -0.23
NFKB1-202ENST00000394820 MYLK4Q86YV6 388 aaPredicted RBP13.6□□□□□ -0.23
NFKB1-202ENST00000394820 C10orf107Q8IVU9 208 aa13.6□□□□□ -0.23
NFKB1-202ENST00000394820 MFN1Q8IWA4 741 aa13.6□□□□□ -0.23
NFKB1-202ENST00000394820 LGALS13Q9UHV8 139 aa13.6□□□□□ -0.23
NFKB1-202ENST00000394820 GIPC1O14908 333 aa13.6□□□□□ -0.23
NFKB1-202ENST00000394820 FAM200BP0CF97 657 aa13.6□□□□□ -0.23
NFKB1-202ENST00000394820 INSRRP14616 1297 aa13.6□□□□□ -0.23
NFKB1-202ENST00000394820 RABGGTBP53611 331 aa13.6□□□□□ -0.23
NFKB1-202ENST00000394820 PLOD1Q02809 727 aaPredicted RBP13.6□□□□□ -0.23
NFKB1-202ENST00000394820 GBE1Q04446 702 aa13.6□□□□□ -0.23
NFKB1-202ENST00000394820 DLG1Q12959 904 aa13.6□□□□□ -0.23
NFKB1-202ENST00000394820 MOGSQ13724 837 aa13.6□□□□□ -0.23
NFKB1-202ENST00000394820 PDK3Q15120 406 aa13.6□□□□□ -0.23
NFKB1-202ENST00000394820 ANKLE1Q8NAG6 615 aa13.6□□□□□ -0.23
NFKB1-202ENST00000394820 PHC3Q8NDX5 983 aa13.6□□□□□ -0.23
NFKB1-202ENST00000394820 HPDLQ96IR7 371 aa13.6□□□□□ -0.23
NFKB1-202ENST00000394820 ACO2Q99798 780 aaKnown RBP13.6□□□□□ -0.23
NFKB1-202ENST00000394820 EPAS1Q99814 870 aa13.6□□□□□ -0.23
NFKB1-202ENST00000394820 VPS33BQ9H267 617 aa13.6□□□□□ -0.23
NFKB1-202ENST00000394820 PDLIM7Q9NR12 457 aa13.6□□□□□ -0.23
NFKB1-202ENST00000394820 HES2Q9Y543 173 aa13.6□□□□□ -0.23
NFKB1-202ENST00000394820 QSER1Q2KHR3 1735 aa13.59□□□□□ -0.23
NFKB1-202ENST00000394820 ATP6AP2A0A1C7CYW4 349 aa13.59□□□□□ -0.23
NFKB1-202ENST00000394820 FZD9O00144 591 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms