RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 GNPTGQ9UJJ9 305 aa19.43■□□□□ 0.7
HOXC6-202ENST00000394331 AGO2Q9UKV8 859 aaKnown RBP19.43■□□□□ 0.7
HOXC6-202ENST00000394331 CLEC11AQ9Y240 323 aa19.43■□□□□ 0.7
HOXC6-202ENST00000394331 SPAG6O75602 509 aa19.43■□□□□ 0.7
HOXC6-202ENST00000394331 C4BPAP04003 597 aaKnown RBP19.43■□□□□ 0.7
HOXC6-202ENST00000394331 FUCA1P04066 466 aa19.43■□□□□ 0.7
HOXC6-202ENST00000394331 DSG3P32926 999 aa19.43■□□□□ 0.7
HOXC6-202ENST00000394331 SP4Q02446 784 aa19.43■□□□□ 0.7
HOXC6-202ENST00000394331 NFX1Q12986 1120 aaKnown RBP19.43■□□□□ 0.7
HOXC6-202ENST00000394331 GK3PQ14409 553 aa19.43■□□□□ 0.7
HOXC6-202ENST00000394331 SLFN12LQ6IEE8 588 aa19.43■□□□□ 0.7
HOXC6-202ENST00000394331 PPP1R2P3Q6NXS1 205 aa19.43■□□□□ 0.7
HOXC6-202ENST00000394331 RCOR2Q8IZ40 523 aa19.43■□□□□ 0.7
HOXC6-202ENST00000394331 STARD8Q92502 1023 aa19.43■□□□□ 0.7
HOXC6-202ENST00000394331 HGH1Q9BTY7 390 aa19.43■□□□□ 0.7
HOXC6-202ENST00000394331 CCDC68Q9H2F9 335 aa19.43■□□□□ 0.7
HOXC6-202ENST00000394331 BCAP29Q9UHQ4 241 aa19.43■□□□□ 0.7
HOXC6-202ENST00000394331 NUB1Q9Y5A7 615 aa19.43■□□□□ 0.7
HOXC6-202ENST00000394331 IKBKGQ9Y6K9 419 aa19.43■□□□□ 0.7
HOXC6-202ENST00000394331 SPATA31C2B4DYI2 1134 aa19.42■□□□□ 0.7
HOXC6-202ENST00000394331 LSM1O15116 133 aaKnown RBP19.42■□□□□ 0.7
HOXC6-202ENST00000394331 H6PDO95479 791 aa19.42■□□□□ 0.7
HOXC6-202ENST00000394331 EGFRP00533 1210 aa19.42■□□□□ 0.7
HOXC6-202ENST00000394331 MTERF2Q49AM1 385 aa19.42■□□□□ 0.7
HOXC6-202ENST00000394331 GPR180Q86V85 440 aa19.42■□□□□ 0.7
HOXC6-202ENST00000394331 HPS6Q86YV9 775 aa19.42■□□□□ 0.7
HOXC6-202ENST00000394331 CENPSQ8N2Z9 138 aa19.42■□□□□ 0.7
HOXC6-202ENST00000394331 NAT8LQ8N9F0 302 aa19.42■□□□□ 0.7
HOXC6-202ENST00000394331 FBXO36Q8NEA4 188 aa19.42■□□□□ 0.7
HOXC6-202ENST00000394331 CCDC124Q96CT7 223 aaKnown RBP19.42■□□□□ 0.7
HOXC6-202ENST00000394331 NACA2Q9H009 215 aa19.42■□□□□ 0.7
HOXC6-202ENST00000394331 ZNF214Q9UL59 606 aaPredicted RBP19.42■□□□□ 0.7
HOXC6-202ENST00000394331 ADAMTS5Q9UNA0 930 aa19.42■□□□□ 0.7
HOXC6-202ENST00000394331 INHBBP09529 407 aa19.42■□□□□ 0.7
HOXC6-202ENST00000394331 SUPT20HL2P0C7V6 817 aa19.42■□□□□ 0.7
HOXC6-202ENST00000394331 PSMC3P17980 439 aa19.42■□□□□ 0.7
HOXC6-202ENST00000394331 EMC2Q15006 297 aa19.42■□□□□ 0.7
HOXC6-202ENST00000394331 CHI3L2Q15782 390 aa19.42■□□□□ 0.7
HOXC6-202ENST00000394331 SUPT20HL1Q3ZLR7 823 aa19.42■□□□□ 0.7
HOXC6-202ENST00000394331 PALM2Q8IXS6 379 aa19.42■□□□□ 0.7
HOXC6-202ENST00000394331 PLEKHA8Q96JA3 519 aa19.42■□□□□ 0.7
HOXC6-202ENST00000394331 VCPIP1Q96JH7 1222 aa19.42■□□□□ 0.7
HOXC6-202ENST00000394331 C12orf42Q96LP6 360 aa19.42■□□□□ 0.7
HOXC6-202ENST00000394331 PDGFDQ9GZP0 370 aaPredicted RBP19.42■□□□□ 0.7
HOXC6-202ENST00000394331 MRPL47Q9HD33 250 aaKnown RBP19.42■□□□□ 0.7
HOXC6-202ENST00000394331 THAP1Q9NVV9 213 aa19.42■□□□□ 0.7
HOXC6-202ENST00000394331 STK39Q9UEW8 545 aa19.42■□□□□ 0.7
HOXC6-202ENST00000394331 OXSR1O95747 527 aaPredicted RBP19.41■□□□□ 0.7
HOXC6-202ENST00000394331 LDHAP00338 332 aaKnown RBP19.41■□□□□ 0.7
HOXC6-202ENST00000394331 CALCAP01258 141 aa19.41■□□□□ 0.7
HOXC6-202ENST00000394331 CBLBQ13191 982 aa19.41■□□□□ 0.7
HOXC6-202ENST00000394331 ANKDD1AQ495B1 522 aa19.41■□□□□ 0.7
HOXC6-202ENST00000394331 CES4AQ5XG92 561 aa19.41■□□□□ 0.7
HOXC6-202ENST00000394331 MON1BQ7L1V2 547 aa19.41■□□□□ 0.7
HOXC6-202ENST00000394331 WDR75Q8IWA0 830 aaKnown RBP19.41■□□□□ 0.7
HOXC6-202ENST00000394331 DEFB107AQ8IZN7 70 aa19.41■□□□□ 0.7
HOXC6-202ENST00000394331 GIN1Q9NXP7 522 aa19.41■□□□□ 0.7
HOXC6-202ENST00000394331 PIM2Q9P1W9 311 aa19.41■□□□□ 0.7
HOXC6-202ENST00000394331 PRPF19Q9UMS4 504 aaKnown RBP19.41■□□□□ 0.7
HOXC6-202ENST00000394331 TRIM64CA6NLI5 447 aa19.41■□□□□ 0.7
HOXC6-202ENST00000394331 CNOT3O75175 753 aaKnown RBP19.41■□□□□ 0.7
HOXC6-202ENST00000394331 SORBS2O94875 1100 aaKnown RBP19.41■□□□□ 0.7
HOXC6-202ENST00000394331 INHBAP08476 426 aa19.41■□□□□ 0.7
HOXC6-202ENST00000394331 FAAP100Q0VG06 881 aa19.41■□□□□ 0.7
HOXC6-202ENST00000394331 FNBP1LQ5T0N5 605 aa19.41■□□□□ 0.7
HOXC6-202ENST00000394331 NBPF12Q5TAG4 269 aaPredicted RBP19.41■□□□□ 0.7
HOXC6-202ENST00000394331 TDRD10Q5VZ19 366 aaKnown RBP19.41■□□□□ 0.7
HOXC6-202ENST00000394331 NLRP7Q8WX94 980 aa19.41■□□□□ 0.7
HOXC6-202ENST00000394331 EBF4Q9BQW3 602 aa19.41■□□□□ 0.7
HOXC6-202ENST00000394331 TEX13BQ9BXU2 312 aa19.41■□□□□ 0.7
HOXC6-202ENST00000394331 HIPK3Q9H422 1215 aa19.41■□□□□ 0.7
HOXC6-202ENST00000394331 ACAD9Q9H845 621 aa19.41■□□□□ 0.7
HOXC6-202ENST00000394331 B3GNT3Q9Y2A9 372 aa19.41■□□□□ 0.7
HOXC6-202ENST00000394331 BANF1O75531 89 aa19.41■□□□□ 0.7
HOXC6-202ENST00000394331 PIGRP01833 764 aa19.41■□□□□ 0.7
HOXC6-202ENST00000394331 ETS1P14921 441 aa19.41■□□□□ 0.7
HOXC6-202ENST00000394331 TAS2R40P59535 323 aa19.41■□□□□ 0.7
HOXC6-202ENST00000394331 CUL2Q13617 745 aa19.41■□□□□ 0.7
HOXC6-202ENST00000394331 MSS51Q4VC12 460 aa19.41■□□□□ 0.7
HOXC6-202ENST00000394331 C6orf52Q5T4I8 152 aa19.41■□□□□ 0.7
HOXC6-202ENST00000394331 TTC39BQ5VTQ0 682 aaPredicted RBP19.41■□□□□ 0.7
HOXC6-202ENST00000394331 LMBRD2Q68DH5 695 aaPredicted RBP19.41■□□□□ 0.7
HOXC6-202ENST00000394331 USP6NLQ92738 828 aa19.41■□□□□ 0.7
HOXC6-202ENST00000394331 LIN28AQ9H9Z2 209 aaKnown RBP19.41■□□□□ 0.7
HOXC6-202ENST00000394331 HEMK1Q9Y5R4 338 aaPredicted RBP19.41■□□□□ 0.7
HOXC6-202ENST00000394331 H3BNH8 94 aa19.4■□□□□ 0.7
HOXC6-202ENST00000394331 SIN3BO75182 1162 aa19.4■□□□□ 0.7
HOXC6-202ENST00000394331 ACO1P21399 889 aaKnown RBP19.4■□□□□ 0.7
HOXC6-202ENST00000394331 C21orf59P57076 290 aa19.4■□□□□ 0.7
HOXC6-202ENST00000394331 NLRP11P59045 1033 aaKnown RBP19.4■□□□□ 0.7
HOXC6-202ENST00000394331 CDKL1Q00532 357 aa19.4■□□□□ 0.7
HOXC6-202ENST00000394331 TCHHL1Q5QJ38 904 aaPredicted RBP19.4■□□□□ 0.7
HOXC6-202ENST00000394331 RHPN2Q8IUC4 686 aa19.4■□□□□ 0.7
HOXC6-202ENST00000394331 NUDCD3Q8IVD9 361 aa19.4■□□□□ 0.7
HOXC6-202ENST00000394331 DLG3Q92796 817 aa19.4■□□□□ 0.7
HOXC6-202ENST00000394331 PNPLA8Q9NP80 782 aa19.4■□□□□ 0.7
HOXC6-202ENST00000394331 HACL1Q9UJ83 578 aa19.4■□□□□ 0.7
HOXC6-202ENST00000394331 ZNF112Q9UJU3 913 aa19.4■□□□□ 0.7
HOXC6-202ENST00000394331 DOLKQ9UPQ8 538 aa19.4■□□□□ 0.7
HOXC6-202ENST00000394331 APOBEC2Q9Y235 224 aaKnown RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms