RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 NKIRAS1Q9NYS0 192 aa15.57■□□□□ 0.08
GPC3-202ENST00000394299 SLC24A2Q9UI40 661 aa15.57■□□□□ 0.08
GPC3-202ENST00000394299 NUDT5Q9UKK9 219 aa15.57■□□□□ 0.08
GPC3-202ENST00000394299 TTC3P53804 2025 aa15.57■□□□□ 0.08
GPC3-202ENST00000394299 FAM47DPA6NHR8 397 aa15.57■□□□□ 0.08
GPC3-202ENST00000394299 MYCP01106 439 aaPredicted RBP15.57■□□□□ 0.08
GPC3-202ENST00000394299 MSH2P43246 934 aa15.57■□□□□ 0.08
GPC3-202ENST00000394299 CRADDP78560 199 aa15.57■□□□□ 0.08
GPC3-202ENST00000394299 GRIK3Q13003 919 aa15.57■□□□□ 0.08
GPC3-202ENST00000394299 XRCC4Q13426 336 aa15.57■□□□□ 0.08
GPC3-202ENST00000394299 OLIG2Q13516 323 aa15.57■□□□□ 0.08
GPC3-202ENST00000394299 BSPRYQ5W0U4 402 aa15.57■□□□□ 0.08
GPC3-202ENST00000394299 RFX8Q6ZV50 586 aa15.57■□□□□ 0.08
GPC3-202ENST00000394299 METTL23Q86XA0 190 aa15.57■□□□□ 0.08
GPC3-202ENST00000394299 VPS52Q8N1B4 723 aa15.57■□□□□ 0.08
GPC3-202ENST00000394299 SMC1BQ8NDV3 1235 aa15.57■□□□□ 0.08
GPC3-202ENST00000394299 RAET1EQ8TD07 263 aa15.57■□□□□ 0.08
GPC3-202ENST00000394299 DENND1AQ8TEH3 1009 aa15.57■□□□□ 0.08
GPC3-202ENST00000394299 PGBD4Q96DM1 585 aa15.57■□□□□ 0.08
GPC3-202ENST00000394299 P2RY11Q96G91 374 aa15.57■□□□□ 0.08
GPC3-202ENST00000394299 PGLYRP2Q96PD5 576 aa15.57■□□□□ 0.08
GPC3-202ENST00000394299 PKMYT1Q99640 499 aa15.57■□□□□ 0.08
GPC3-202ENST00000394299 CSNK1G1Q9HCP0 422 aa15.57■□□□□ 0.08
GPC3-202ENST00000394299 PTCH2Q9Y6C5 1203 aa15.57■□□□□ 0.08
GPC3-202ENST00000394299 M0QZQ0 153 aa15.56■□□□□ 0.08
GPC3-202ENST00000394299 KCNK1O00180 336 aa15.56■□□□□ 0.08
GPC3-202ENST00000394299 UGT1A9O60656 530 aa15.56■□□□□ 0.08
GPC3-202ENST00000394299 FBXO21O94952 628 aa15.56■□□□□ 0.08
GPC3-202ENST00000394299 ERCC2P18074 760 aa15.56■□□□□ 0.08
GPC3-202ENST00000394299 SMAD1Q15797 465 aaKnown RBP15.56■□□□□ 0.08
GPC3-202ENST00000394299 FAM26DQ5JW98 314 aa15.56■□□□□ 0.08
GPC3-202ENST00000394299 CLLU1OSQ5K130 101 aa15.56■□□□□ 0.08
GPC3-202ENST00000394299 SDHAF4Q5VUM1 108 aa15.56■□□□□ 0.08
GPC3-202ENST00000394299 ARHGEF18Q6ZSZ5 1173 aa15.56■□□□□ 0.08
GPC3-202ENST00000394299 MZB1Q8WU39 189 aa15.56■□□□□ 0.08
GPC3-202ENST00000394299 THOC1Q96FV9 657 aaKnown RBP15.56■□□□□ 0.08
GPC3-202ENST00000394299 HHIPL1Q96JK4 782 aa15.56■□□□□ 0.08
GPC3-202ENST00000394299 GLT1D1Q96MS3 346 aa15.56■□□□□ 0.08
GPC3-202ENST00000394299 TGS1Q96RS0 853 aaKnown RBP15.56■□□□□ 0.08
GPC3-202ENST00000394299 SMC6Q96SB8 1091 aa15.56■□□□□ 0.08
GPC3-202ENST00000394299 DHRS4Q9BTZ2 278 aa15.56■□□□□ 0.08
GPC3-202ENST00000394299 UGT1A7Q9HAW7 530 aa15.56■□□□□ 0.08
GPC3-202ENST00000394299 UGT1A10Q9HAW8 530 aa15.56■□□□□ 0.08
GPC3-202ENST00000394299 UGT1A8Q9HAW9 530 aa15.56■□□□□ 0.08
GPC3-202ENST00000394299 SMYD2Q9NRG4 433 aa15.56■□□□□ 0.08
GPC3-202ENST00000394299 DNAJB4Q9UDY4 337 aa15.56■□□□□ 0.08
GPC3-202ENST00000394299 FBXW11Q9UKB1 542 aa15.56■□□□□ 0.08
GPC3-202ENST00000394299 ACTL7BQ9Y614 415 aa15.56■□□□□ 0.08
GPC3-202ENST00000394299 MAD1L1Q9Y6D9 718 aa15.56■□□□□ 0.08
GPC3-202ENST00000394299 LAMA2P24043 3122 aaKnown RBP15.56■□□□□ 0.08
GPC3-202ENST00000394299 H3BRJ5 948 aa15.56■□□□□ 0.08
GPC3-202ENST00000394299 SMAPO00193 183 aa15.56■□□□□ 0.08
GPC3-202ENST00000394299 CA4P22748 312 aa15.56■□□□□ 0.08
GPC3-202ENST00000394299 FAAP100Q0VG06 881 aa15.56■□□□□ 0.08
GPC3-202ENST00000394299 DPYSQ14117 519 aa15.56■□□□□ 0.08
GPC3-202ENST00000394299 DEFB115Q30KQ5 88 aa15.56■□□□□ 0.08
GPC3-202ENST00000394299 PDCD7Q8N8D1 485 aaKnown RBP15.56■□□□□ 0.08
GPC3-202ENST00000394299 COLGALT1Q8NBJ5 622 aa15.56■□□□□ 0.08
GPC3-202ENST00000394299 COLEC11Q9BWP8 271 aa15.56■□□□□ 0.08
GPC3-202ENST00000394299 PHACTR1Q9C0D0 580 aa15.56■□□□□ 0.08
GPC3-202ENST00000394299 TKTL2Q9H0I9 626 aa15.56■□□□□ 0.08
GPC3-202ENST00000394299 ZC3H7BQ9UGR2 993 aaKnown RBP15.56■□□□□ 0.08
GPC3-202ENST00000394299 PRG3Q9Y2Y8 225 aaPredicted RBP15.56■□□□□ 0.08
GPC3-202ENST00000394299 C9IYK1 514 aa15.55■□□□□ 0.08
GPC3-202ENST00000394299 DCLK1O15075 740 aa15.55■□□□□ 0.08
GPC3-202ENST00000394299 TYROBPO43914 113 aa15.55■□□□□ 0.08
GPC3-202ENST00000394299 KIAA0754O94854 1291 aa15.55■□□□□ 0.08
GPC3-202ENST00000394299 ASMTLO95671 621 aa15.55■□□□□ 0.08
GPC3-202ENST00000394299 C1QAP02745 245 aa15.55■□□□□ 0.08
GPC3-202ENST00000394299 CYP11A1P05108 521 aa15.55■□□□□ 0.08
GPC3-202ENST00000394299 SPARCL1Q14515 664 aa15.55■□□□□ 0.08
GPC3-202ENST00000394299 LHX8Q68G74 356 aa15.55■□□□□ 0.08
GPC3-202ENST00000394299 TRMT10BQ6PF06 316 aaKnown RBP15.55■□□□□ 0.08
GPC3-202ENST00000394299 FAM47EQ6ZV65 393 aa15.55■□□□□ 0.08
GPC3-202ENST00000394299 CTAGE3PQ8IX95 158 aa15.55■□□□□ 0.08
GPC3-202ENST00000394299 UNC5BQ8IZJ1 945 aa15.55■□□□□ 0.08
GPC3-202ENST00000394299 NPWQ8N729 165 aa15.55■□□□□ 0.08
GPC3-202ENST00000394299 SIGLEC10Q96LC7 697 aa15.55■□□□□ 0.08
GPC3-202ENST00000394299 RNF103O00237 685 aa15.55■□□□□ 0.08
GPC3-202ENST00000394299 TAC1P20366 129 aa15.55■□□□□ 0.08
GPC3-202ENST00000394299 KLHL38Q2WGJ6 581 aa15.55■□□□□ 0.08
GPC3-202ENST00000394299 CGB2Q6NT52 195 aa15.55■□□□□ 0.08
GPC3-202ENST00000394299 DCLRE1AQ6PJP8 1040 aa15.55■□□□□ 0.08
GPC3-202ENST00000394299 MICALCLQ6ZW33 695 aa15.55■□□□□ 0.08
GPC3-202ENST00000394299 TAC4Q86UU9 113 aa15.55■□□□□ 0.08
GPC3-202ENST00000394299 PPM1NQ8N819 430 aa15.55■□□□□ 0.08
GPC3-202ENST00000394299 CCDC197Q8NCU1 140 aa15.55■□□□□ 0.08
GPC3-202ENST00000394299 SERAC1Q96JX3 654 aa15.55■□□□□ 0.08
GPC3-202ENST00000394299 CYTH2Q99418 400 aa15.55■□□□□ 0.08
GPC3-202ENST00000394299 WDCPQ9H6R7 721 aa15.55■□□□□ 0.08
GPC3-202ENST00000394299 RGS18Q9NS28 235 aa15.55■□□□□ 0.08
GPC3-202ENST00000394299 CREBZFQ9NS37 354 aa15.55■□□□□ 0.08
GPC3-202ENST00000394299 TTLL3Q9Y4R7 772 aa15.55■□□□□ 0.08
GPC3-202ENST00000394299 TSC2P49815 1807 aa15.54■□□□□ 0.08
GPC3-202ENST00000394299 WDR91A4D1P6 747 aa15.54■□□□□ 0.08
GPC3-202ENST00000394299 DNM1LO00429 736 aa15.54■□□□□ 0.08
GPC3-202ENST00000394299 MAGEA6P43360 314 aa15.54■□□□□ 0.08
GPC3-202ENST00000394299 WASHC5Q12768 1159 aa15.54■□□□□ 0.08
GPC3-202ENST00000394299 PPP1R21Q6ZMI0 780 aa15.54■□□□□ 0.08
GPC3-202ENST00000394299 UNC5AQ6ZN44 842 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms