RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 IPO4Q8TEX9 1081 aaKnown RBP31.98■■■□□ 2.71
CMTM4-202ENST00000394106 TMA16Q96EY4 203 aaKnown RBP31.98■■■□□ 2.71
CMTM4-202ENST00000394106 ACOX2Q99424 681 aa31.98■■■□□ 2.71
CMTM4-202ENST00000394106 BCCIPQ9P287 314 aaKnown RBP eCLIP31.98■■■□□ 2.71
CMTM4-202ENST00000394106 INVSQ9Y283 1065 aa31.98■■■□□ 2.71
CMTM4-202ENST00000394106 TCRBV21S2A2A0A5A6 115 aa31.97■■■□□ 2.71
CMTM4-202ENST00000394106 FAM170AA1A519 330 aa31.97■■■□□ 2.71
CMTM4-202ENST00000394106 LGALS16A8MUM7 142 aa31.97■■■□□ 2.71
CMTM4-202ENST00000394106 ACSL4O60488 711 aa31.97■■■□□ 2.71
CMTM4-202ENST00000394106 GRAP2O75791 330 aa31.97■■■□□ 2.71
CMTM4-202ENST00000394106 HOXD9P28356 352 aaPredicted RBP31.97■■■□□ 2.71
CMTM4-202ENST00000394106 SNX16P57768 344 aa31.97■■■□□ 2.71
CMTM4-202ENST00000394106 ZNF445P59923 1031 aa31.97■■■□□ 2.71
CMTM4-202ENST00000394106 NNTQ13423 1086 aa31.97■■■□□ 2.71
CMTM4-202ENST00000394106 SYCP1Q15431 976 aa31.97■■■□□ 2.71
CMTM4-202ENST00000394106 GEN1Q17RS7 908 aa31.97■■■□□ 2.71
CMTM4-202ENST00000394106 PTPN20Q4JDL3 420 aa31.97■■■□□ 2.71
CMTM4-202ENST00000394106 DCAF6Q58WW2 860 aa31.97■■■□□ 2.71
CMTM4-202ENST00000394106 SDE2Q6IQ49 451 aa31.97■■■□□ 2.71
CMTM4-202ENST00000394106 RFWD3Q6PCD5 774 aa31.97■■■□□ 2.71
CMTM4-202ENST00000394106 CACNA2D4Q7Z3S7 1137 aa31.97■■■□□ 2.71
CMTM4-202ENST00000394106 KBTBD6Q86V97 674 aa31.97■■■□□ 2.71
CMTM4-202ENST00000394106 TMEM35BQ8NCS4 154 aa31.97■■■□□ 2.71
CMTM4-202ENST00000394106 HMGB4Q8WW32 186 aa31.97■■■□□ 2.71
CMTM4-202ENST00000394106 HSD3B7Q9H2F3 369 aa31.97■■■□□ 2.71
CMTM4-202ENST00000394106 NLRC4Q9NPP4 1024 aa31.97■■■□□ 2.71
CMTM4-202ENST00000394106 DCLK1O15075 740 aa31.96■■■□□ 2.71
CMTM4-202ENST00000394106 EPHB6O15197 1021 aa31.96■■■□□ 2.71
CMTM4-202ENST00000394106 GFPT2O94808 682 aa31.96■■■□□ 2.71
CMTM4-202ENST00000394106 MOCS2O96007 188 aaPredicted RBP31.96■■■□□ 2.71
CMTM4-202ENST00000394106 HOXB2P14652 356 aa31.96■■■□□ 2.71
CMTM4-202ENST00000394106 UBXN1Q04323 297 aa31.96■■■□□ 2.71
CMTM4-202ENST00000394106 EFHC1Q5JVL4 640 aa31.96■■■□□ 2.71
CMTM4-202ENST00000394106 ANKS1BQ7Z6G8 1248 aa31.96■■■□□ 2.71
CMTM4-202ENST00000394106 NOP9Q86U38 636 aaKnown RBP31.96■■■□□ 2.71
CMTM4-202ENST00000394106 ERLEC1Q96DZ1 483 aa31.96■■■□□ 2.71
CMTM4-202ENST00000394106 SLC2A11Q9BYW1 496 aa31.96■■■□□ 2.71
CMTM4-202ENST00000394106 SIK3Q9Y2K2 1263 aa31.96■■■□□ 2.71
CMTM4-202ENST00000394106 GVINP1Q7Z2Y8 2422 aa31.96■■■□□ 2.71
CMTM4-202ENST00000394106 GFRA2O00451 464 aa31.95■■■□□ 2.71
CMTM4-202ENST00000394106 TRUB2O95900 331 aaKnown RBP31.95■■■□□ 2.71
CMTM4-202ENST00000394106 RETP07949 1114 aa31.95■■■□□ 2.71
CMTM4-202ENST00000394106 SLC6A4P31645 630 aa31.95■■■□□ 2.71
CMTM4-202ENST00000394106 SGSHP51688 502 aa31.95■■■□□ 2.71
CMTM4-202ENST00000394106 PITX1P78337 314 aaPredicted RBP31.95■■■□□ 2.71
CMTM4-202ENST00000394106 USP39Q53GS9 565 aaKnown RBP31.95■■■□□ 2.71
CMTM4-202ENST00000394106 FAM133BQ5BKY9 247 aaKnown RBP31.95■■■□□ 2.71
CMTM4-202ENST00000394106 DEFB106AQ8N104 65 aa31.95■■■□□ 2.71
CMTM4-202ENST00000394106 PGBD3Q8N328 593 aa31.95■■■□□ 2.71
CMTM4-202ENST00000394106 AZIN2Q96A70 460 aa31.95■■■□□ 2.71
CMTM4-202ENST00000394106 SLC39A13Q96H72 371 aa31.95■■■□□ 2.71
CMTM4-202ENST00000394106 FAM204AQ9H8W3 233 aa31.95■■■□□ 2.71
CMTM4-202ENST00000394106 ASNSD1Q9NWL6 643 aa31.95■■■□□ 2.71
CMTM4-202ENST00000394106 CACNA2D2Q9NY47 1150 aa31.95■■■□□ 2.71
CMTM4-202ENST00000394106 HSF2BPO75031 334 aa31.94■■■□□ 2.7
CMTM4-202ENST00000394106 GLI1P08151 1106 aa31.94■■■□□ 2.7
CMTM4-202ENST00000394106 ATP1A3P13637 1013 aa31.94■■■□□ 2.7
CMTM4-202ENST00000394106 NADSYN1Q6IA69 706 aa31.94■■■□□ 2.7
CMTM4-202ENST00000394106 OLFML1Q6UWY5 402 aa31.94■■■□□ 2.7
CMTM4-202ENST00000394106 DDX1Q92499 740 aaKnown RBP31.94■■■□□ 2.7
CMTM4-202ENST00000394106 SLC2A13Q96QE2 648 aa31.94■■■□□ 2.7
CMTM4-202ENST00000394106 SPAG5Q96R06 1193 aa31.94■■■□□ 2.7
CMTM4-202ENST00000394106 DDX50Q9BQ39 737 aaKnown RBP31.94■■■□□ 2.7
CMTM4-202ENST00000394106 WDR87Q6ZQQ6 2873 aa31.94■■■□□ 2.7
CMTM4-202ENST00000394106 FRYLO94915 3013 aa31.93■■■□□ 2.7
CMTM4-202ENST00000394106 SYNJ2BP-COX16A0A087WUM0 186 aa31.93■■■□□ 2.7
CMTM4-202ENST00000394106 IRAK2O43187 625 aa31.93■■■□□ 2.7
CMTM4-202ENST00000394106 TBL1XO60907 577 aa31.93■■■□□ 2.7
CMTM4-202ENST00000394106 APOEP02649 317 aa31.93■■■□□ 2.7
CMTM4-202ENST00000394106 MMEP08473 750 aa31.93■■■□□ 2.7
CMTM4-202ENST00000394106 CDK17Q00537 523 aa31.93■■■□□ 2.7
CMTM4-202ENST00000394106 SLC6A3Q01959 620 aa31.93■■■□□ 2.7
CMTM4-202ENST00000394106 SPEM2Q0P670 501 aa31.93■■■□□ 2.7
CMTM4-202ENST00000394106 ZC3H12AQ5D1E8 599 aaKnown RBP31.93■■■□□ 2.7
CMTM4-202ENST00000394106 PIK3R6Q5UE93 754 aa31.93■■■□□ 2.7
CMTM4-202ENST00000394106 NEK11Q8NG66 645 aa31.93■■■□□ 2.7
CMTM4-202ENST00000394106 EPS8L1Q8TE68 723 aa31.93■■■□□ 2.7
CMTM4-202ENST00000394106 UCMAQ8WVF2 138 aa31.93■■■□□ 2.7
CMTM4-202ENST00000394106 BPIFA3Q9BQP9 254 aa31.93■■■□□ 2.7
CMTM4-202ENST00000394106 COX16Q9P0S2 106 aa31.93■■■□□ 2.7
CMTM4-202ENST00000394106 USP18Q9UMW8 372 aa31.93■■■□□ 2.7
CMTM4-202ENST00000394106 CFAP54Q96N23 3096 aa31.93■■■□□ 2.7
CMTM4-202ENST00000394106 LRRC10BA6NIK2 292 aa31.92■■■□□ 2.7
CMTM4-202ENST00000394106 IGLV3-25P01717 112 aa31.92■■■□□ 2.7
CMTM4-202ENST00000394106 GBP1P32455 592 aa31.92■■■□□ 2.7
CMTM4-202ENST00000394106 CDH5P33151 784 aaPredicted RBP31.92■■■□□ 2.7
CMTM4-202ENST00000394106 SOX5P35711 763 aa31.92■■■□□ 2.7
CMTM4-202ENST00000394106 JAM2P57087 298 aa31.92■■■□□ 2.7
CMTM4-202ENST00000394106 APTXQ7Z2E3 356 aaKnown RBP31.92■■■□□ 2.7
CMTM4-202ENST00000394106 SLC20A1Q8WUM9 679 aa31.92■■■□□ 2.7
CMTM4-202ENST00000394106 CIPCQ9C0C6 399 aa31.92■■■□□ 2.7
CMTM4-202ENST00000394106 STIM2Q9P246 746 aa31.92■■■□□ 2.7
CMTM4-202ENST00000394106 DAAM1Q9Y4D1 1078 aa31.92■■■□□ 2.7
CMTM4-202ENST00000394106 RAD54BQ9Y620 910 aa31.92■■■□□ 2.7
CMTM4-202ENST00000394106 ZNF292O60281 2723 aa31.91■■■□□ 2.7
CMTM4-202ENST00000394106 SPAG17Q6Q759 2223 aa31.91■■■□□ 2.7
CMTM4-202ENST00000394106 A0A1W2PQF6 199 aa31.91■■■□□ 2.7
CMTM4-202ENST00000394106 DHX40Q8IX18 779 aaKnown RBP31.91■■■□□ 2.7
CMTM4-202ENST00000394106 GPR161Q8N6U8 529 aaKnown RBP31.91■■■□□ 2.7
CMTM4-202ENST00000394106 GABRG3Q99928 467 aa31.91■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms