RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 THTPAQ9BU02 230 aa19.44■□□□□ 0.7
CBX1-202ENST00000393408 C1orf21Q9H246 121 aa19.44■□□□□ 0.7
CBX1-202ENST00000393408 TXNRD2Q9NNW7 524 aa19.44■□□□□ 0.7
CBX1-202ENST00000393408 GPRC5DQ9NZD1 345 aa19.44■□□□□ 0.7
CBX1-202ENST00000393408 SLC7A8Q9UHI5 535 aa19.44■□□□□ 0.7
CBX1-202ENST00000393408 GTF2IRD1Q9UHL9 959 aa19.44■□□□□ 0.7
CBX1-202ENST00000393408 AP4E1Q9UPM8 1137 aa19.44■□□□□ 0.7
CBX1-202ENST00000393408 WDR27A2RRH5 827 aa19.44■□□□□ 0.7
CBX1-202ENST00000393408 IRF6O14896 467 aa19.44■□□□□ 0.7
CBX1-202ENST00000393408 CIB2O75838 187 aa19.44■□□□□ 0.7
CBX1-202ENST00000393408 PEX19P40855 299 aa19.44■□□□□ 0.7
CBX1-202ENST00000393408 ACTR3P61158 418 aa19.44■□□□□ 0.7
CBX1-202ENST00000393408 IRX4P78413 519 aa19.44■□□□□ 0.7
CBX1-202ENST00000393408 MXRA7P84157 204 aa19.44■□□□□ 0.7
CBX1-202ENST00000393408 NIPAL4Q0D2K0 466 aa19.44■□□□□ 0.7
CBX1-202ENST00000393408 TUBB3Q13509 450 aa19.44■□□□□ 0.7
CBX1-202ENST00000393408 DLK2Q6UY11 383 aa19.44■□□□□ 0.7
CBX1-202ENST00000393408 ACMSDQ8TDX5 336 aa19.44■□□□□ 0.7
CBX1-202ENST00000393408 DTLQ9NZJ0 730 aa19.44■□□□□ 0.7
CBX1-202ENST00000393408 DLGAP2Q9P1A6 1054 aa19.44■□□□□ 0.7
CBX1-202ENST00000393408 SORCS3Q9UPU3 1222 aa19.44■□□□□ 0.7
CBX1-202ENST00000393408 TSPAN1O60635 241 aa19.43■□□□□ 0.7
CBX1-202ENST00000393408 AOC1P19801 751 aa19.43■□□□□ 0.7
CBX1-202ENST00000393408 SNX16P57768 344 aa19.43■□□□□ 0.7
CBX1-202ENST00000393408 TEDDM1Q5T9Z0 273 aa19.43■□□□□ 0.7
CBX1-202ENST00000393408 C6orf163Q5TEZ5 329 aa19.43■□□□□ 0.7
CBX1-202ENST00000393408 NAIF1Q69YI7 327 aaPredicted RBP19.43■□□□□ 0.7
CBX1-202ENST00000393408 C16orf46Q6P387 395 aa19.43■□□□□ 0.7
CBX1-202ENST00000393408 DENND5BQ6ZUT9 1274 aa19.43■□□□□ 0.7
CBX1-202ENST00000393408 CLEC4CQ8WTT0 213 aa19.43■□□□□ 0.7
CBX1-202ENST00000393408 ZNF184Q99676 751 aaPredicted RBP19.43■□□□□ 0.7
CBX1-202ENST00000393408 VCXQ9H320 206 aa19.43■□□□□ 0.7
CBX1-202ENST00000393408 SLC17A6Q9P2U8 582 aa19.43■□□□□ 0.7
CBX1-202ENST00000393408 SNX9Q9Y5X1 595 aa19.43■□□□□ 0.7
CBX1-202ENST00000393408 ITM2AO43736 263 aa19.43■□□□□ 0.7
CBX1-202ENST00000393408 ALDOAP04075 364 aaKnown RBP19.43■□□□□ 0.7
CBX1-202ENST00000393408 FGF3P11487 239 aaPredicted RBP19.43■□□□□ 0.7
CBX1-202ENST00000393408 MLNP12872 115 aa19.43■□□□□ 0.7
CBX1-202ENST00000393408 ANPEPP15144 967 aa19.43■□□□□ 0.7
CBX1-202ENST00000393408 VAV1P15498 845 aa19.43■□□□□ 0.7
CBX1-202ENST00000393408 SARNPP82979 210 aaKnown RBP19.43■□□□□ 0.7
CBX1-202ENST00000393408 TTLL4Q14679 1199 aa19.43■□□□□ 0.7
CBX1-202ENST00000393408 KCTD2Q14681 263 aa19.43■□□□□ 0.7
CBX1-202ENST00000393408 NCBP2-AS2Q69YL0 99 aa19.43■□□□□ 0.7
CBX1-202ENST00000393408 PPP1R14CQ8TAE6 165 aa19.43■□□□□ 0.7
CBX1-202ENST00000393408 MMP19Q99542 508 aa19.43■□□□□ 0.7
CBX1-202ENST00000393408 CXCL16Q9H2A7 254 aa19.43■□□□□ 0.7
CBX1-202ENST00000393408 NR2E3Q9Y5X4 410 aa19.43■□□□□ 0.7
CBX1-202ENST00000393408 A0A0G2JLL6 359 aaPredicted RBP19.42■□□□□ 0.7
CBX1-202ENST00000393408 PPEF2O14830 753 aa19.42■□□□□ 0.7
CBX1-202ENST00000393408 LYPLA1O75608 230 aaPredicted RBP19.42■□□□□ 0.7
CBX1-202ENST00000393408 DGKIO75912 1065 aa19.42■□□□□ 0.7
CBX1-202ENST00000393408 CPOXP36551 454 aa19.42■□□□□ 0.7
CBX1-202ENST00000393408 Q3C1V9 767 aa19.42■□□□□ 0.7
CBX1-202ENST00000393408 N4BP2L1Q5TBK1 243 aaPredicted RBP19.42■□□□□ 0.7
CBX1-202ENST00000393408 OR52E8Q6IFG1 317 aa19.42■□□□□ 0.7
CBX1-202ENST00000393408 SLC26A9Q7LBE3 791 aa19.42■□□□□ 0.7
CBX1-202ENST00000393408 PRRT2Q7Z6L0 340 aaPredicted RBP19.42■□□□□ 0.7
CBX1-202ENST00000393408 WDR75Q8IWA0 830 aaKnown RBP19.42■□□□□ 0.7
CBX1-202ENST00000393408 PIWIL2Q8TC59 973 aaKnown RBP19.42■□□□□ 0.7
CBX1-202ENST00000393408 HTR3CQ8WXA8 447 aa19.42■□□□□ 0.7
CBX1-202ENST00000393408 LPIN3Q9BQK8 851 aa19.42■□□□□ 0.7
CBX1-202ENST00000393408 APOL6Q9BWW8 343 aa19.42■□□□□ 0.7
CBX1-202ENST00000393408 MORF4L1Q9UBU8 362 aa19.42■□□□□ 0.7
CBX1-202ENST00000393408 MFHAS1Q9Y4C4 1052 aa19.42■□□□□ 0.7
CBX1-202ENST00000393408 CSADQ9Y600 493 aa19.42■□□□□ 0.7
CBX1-202ENST00000393408 A0A0A0MRY4 1105 aa19.42■□□□□ 0.7
CBX1-202ENST00000393408 GLRA3O75311 464 aa19.42■□□□□ 0.7
CBX1-202ENST00000393408 LGALS2P05162 132 aa19.42■□□□□ 0.7
CBX1-202ENST00000393408 FDFT1P37268 417 aa19.42■□□□□ 0.7
CBX1-202ENST00000393408 RPL10AP62906 217 aaKnown RBP19.42■□□□□ 0.7
CBX1-202ENST00000393408 ARHGAP1Q07960 439 aa19.42■□□□□ 0.7
CBX1-202ENST00000393408 PDE1CQ14123 709 aaPredicted RBP19.42■□□□□ 0.7
CBX1-202ENST00000393408 RABGAP1LQ5R372 815 aa19.42■□□□□ 0.7
CBX1-202ENST00000393408 PACS1Q6VY07 963 aa19.42■□□□□ 0.7
CBX1-202ENST00000393408 CCDC185Q8N715 623 aa19.42■□□□□ 0.7
CBX1-202ENST00000393408 SPATA13Q96N96 652 aa19.42■□□□□ 0.7
CBX1-202ENST00000393408 OLFM3Q96PB7 478 aa19.42■□□□□ 0.7
CBX1-202ENST00000393408 XPNPEP3Q9NQH7 507 aa19.42■□□□□ 0.7
CBX1-202ENST00000393408 RBPJLQ9UBG7 517 aa19.42■□□□□ 0.7
CBX1-202ENST00000393408 DNAJC16Q9Y2G8 782 aa19.42■□□□□ 0.7
CBX1-202ENST00000393408 ASB3Q9Y575 518 aa19.42■□□□□ 0.7
CBX1-202ENST00000393408 USP3Q9Y6I4 520 aa19.42■□□□□ 0.7
CBX1-202ENST00000393408 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.41■□□□□ 0.7
CBX1-202ENST00000393408 TPP1O14773 563 aa19.41■□□□□ 0.7
CBX1-202ENST00000393408 MAP3K13O43283 966 aa19.41■□□□□ 0.7
CBX1-202ENST00000393408 PLIN3O60664 434 aa19.41■□□□□ 0.7
CBX1-202ENST00000393408 GRM5P41594 1212 aa19.41■□□□□ 0.7
CBX1-202ENST00000393408 CRADDP78560 199 aa19.41■□□□□ 0.7
CBX1-202ENST00000393408 ARHGAP17Q68EM7 881 aa19.41■□□□□ 0.7
CBX1-202ENST00000393408 ZNF483Q8TF39 744 aaPredicted RBP19.41■□□□□ 0.7
CBX1-202ENST00000393408 TFB1MQ8WVM0 346 aaKnown RBP19.41■□□□□ 0.7
CBX1-202ENST00000393408 STN1Q9H668 368 aaKnown RBP19.41■□□□□ 0.7
CBX1-202ENST00000393408 GPAMQ9HCL2 828 aa19.41■□□□□ 0.7
CBX1-202ENST00000393408 DNAJB4Q9UDY4 337 aa19.41■□□□□ 0.7
CBX1-202ENST00000393408 SCOCQ9UIL1 159 aa19.41■□□□□ 0.7
CBX1-202ENST00000393408 MYO18AQ92614 2054 aaKnown RBP19.41■□□□□ 0.7
CBX1-202ENST00000393408 RALGAPA2Q2PPJ7 1873 aa19.41■□□□□ 0.7
CBX1-202ENST00000393408 C6orf222P0C671 652 aaPredicted RBP19.41■□□□□ 0.7
CBX1-202ENST00000393408 SLC1A6P48664 564 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms