RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 BAP1Q92560 729 aa7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 EXOC4Q96A65 974 aa7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 SLC39A13Q96H72 371 aa7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 PRICKLE1Q96MT3 831 aaPredicted RBP7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 SLC2A13Q96QE2 648 aa7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 XPO6Q96QU8 1125 aaKnown RBP7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 ACOX2Q99424 681 aa7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 C11orf70Q9BRQ4 267 aa7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 IER2Q9BTL4 223 aa7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 DCLK3Q9C098 648 aa7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 IRF2BPLQ9H1B7 796 aa7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 NUCKS1Q9H1E3 243 aaKnown RBP7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 PLSCR2Q9NRY7 297 aa7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 SEPT11Q9NVA2 429 aaKnown RBP7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 ZSCAN32Q9NX65 697 aa7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 STIM2Q9P246 746 aa7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 WDR35Q9P2L0 1181 aa7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 SLC8A2Q9UPR5 921 aa7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 PRR23AA6NEV1 266 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 LRRC53A6NM62 1247 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 RIOK3O14730 519 aaKnown RBP7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 ACSL4O60488 711 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 GFRA3O60609 400 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 HSF2BPO75031 334 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 ADAM23O75077 832 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 DAB1O75553 588 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 IGLV3-25P01717 112 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 CYP1A1P04798 512 aaPredicted RBP7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 CISD3P0C7P0 127 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 HOXD9P28356 352 aaPredicted RBP7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 CHKAP35790 457 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 KIR2DL1P43626 348 aaPredicted RBP7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 SULT1E1P49888 294 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 ATXN1P54253 815 aaKnown RBP7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 NR1I3Q14994 352 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 SKOR2Q2VWA4 1001 aaPredicted RBP7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 ZNF528Q3MIS6 628 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 FBXO43Q4G163 708 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 FILIP1LQ4L180 1135 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 RAB6CQ53S08 254 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 EFHC1Q5JVL4 640 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 ADGRF1Q5T601 910 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 FAM102AQ5T9C2 384 aaPredicted RBP7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 RAP1GAP2Q684P5 730 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 NUGGCQ68CJ6 796 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 TRNP1Q6NT89 227 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 TMEM92Q6UXU6 159 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 MAMSTRQ6ZN01 415 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 SYT13Q7L8C5 426 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 SLC26A9Q7LBE3 791 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 CIR1Q86X95 450 aaPredicted RBP7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 CFAP52Q8N1V2 620 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 CPXM2Q8N436 756 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 EMC1Q8N766 993 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 IL17RCQ8NAC3 791 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 ZBTB44Q8NCP5 570 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 RNF214Q8ND24 703 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 OLIG1Q8TAK6 271 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 WFDC5Q8TCV5 224 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 ATRIPQ8WXE1 791 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 SORCS1Q8WY21 1168 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 NELL1Q92832 810 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 NKD2Q969F2 451 aaPredicted RBP7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 C18orf8Q96DM3 657 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 SERPINB11Q96P15 392 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 TPSD1Q9BZJ3 242 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 RAB6CQ9H0N0 254 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 OCEL1Q9H607 264 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 METTL5Q9NRN9 209 aaKnown RBP7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 TMPRSS4Q9NRS4 437 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 DDIT4Q9NX09 232 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 CACNA2D2Q9NY47 1150 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 IFNKQ9P0W0 207 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 INVSQ9Y283 1065 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 TLR6Q9Y2C9 796 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 ZNF510Q9Y2H8 683 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 SNX10Q9Y5X0 201 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 RAD54BQ9Y620 910 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 F5P12259 2224 aa7.97□□□□□ -1.13
HMGB3P1-201ENST00000393368 KIAA1549LQ6ZVL6 1849 aa7.96□□□□□ -1.13
HMGB3P1-201ENST00000393368 A0A0A0MRY4 1105 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 TMCO5BA8MYB1 307 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 WASH3PC4AMC7 463 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 PROB1E7EW31 1015 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 GOLGA6L19H0YKK7 550 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 I6L893 689 aaPredicted RBP7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 M0QYT0 321 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 GFRA2O00451 464 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 DCLK1O15075 740 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 HRO43593 1189 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 TBL1XO60907 577 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 LILRB5O75023 590 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 ATG13O75143 517 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 PAPSS2O95340 614 aaPredicted RBP7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 LSM8O95777 96 aaKnown RBP7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 CYBBP04839 570 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 GLI1P08151 1106 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 UNGP13051 313 aaPredicted RBP7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 HLA-FP30511 346 aa7.96□□□□□ -1.14
HMGB3P1-201ENST00000393368 FLT3P36888 993 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms