RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 UBAP2Q5T6F2 1119 aaKnown RBP11.84□□□□□ -0.51
SMARCAL1-203ENST00000392128 AGBL2Q5U5Z8 902 aa11.84□□□□□ -0.51
SMARCAL1-203ENST00000392128 C4orf22Q6V702 233 aa11.84□□□□□ -0.51
SMARCAL1-203ENST00000392128 TTC9BQ8N6N2 239 aa11.84□□□□□ -0.51
SMARCAL1-203ENST00000392128 FAM76AQ8TAV0 307 aa11.84□□□□□ -0.51
SMARCAL1-203ENST00000392128 EXOC4Q96A65 974 aa11.84□□□□□ -0.51
SMARCAL1-203ENST00000392128 ZNF689Q96CS4 500 aaPredicted RBP11.84□□□□□ -0.51
SMARCAL1-203ENST00000392128 IGSF21Q96ID5 467 aa11.84□□□□□ -0.51
SMARCAL1-203ENST00000392128 SPATA17Q96L03 361 aa11.84□□□□□ -0.51
SMARCAL1-203ENST00000392128 NMUR1Q9HB89 426 aa11.84□□□□□ -0.51
SMARCAL1-203ENST00000392128 COMMD8Q9NX08 183 aa11.84□□□□□ -0.51
SMARCAL1-203ENST00000392128 ARHGEF38Q9NXL2 777 aa11.84□□□□□ -0.51
SMARCAL1-203ENST00000392128 A0A1W2PQH9 124 aa11.84□□□□□ -0.51
SMARCAL1-203ENST00000392128 FAM72CH0Y354 149 aa11.84□□□□□ -0.51
SMARCAL1-203ENST00000392128 MFSD11O43934 449 aa11.84□□□□□ -0.51
SMARCAL1-203ENST00000392128 EFCAB14O75071 495 aa11.84□□□□□ -0.51
SMARCAL1-203ENST00000392128 MAP3K6O95382 1288 aa11.84□□□□□ -0.51
SMARCAL1-203ENST00000392128 VNN2O95498 520 aa11.84□□□□□ -0.51
SMARCAL1-203ENST00000392128 HAPLN1P10915 354 aaPredicted RBP11.84□□□□□ -0.51
SMARCAL1-203ENST00000392128 PGFP49763 221 aa11.84□□□□□ -0.51
SMARCAL1-203ENST00000392128 ARPP19P56211 112 aa11.84□□□□□ -0.51
SMARCAL1-203ENST00000392128 TPI1P60174 286 aa11.84□□□□□ -0.51
SMARCAL1-203ENST00000392128 KRT71Q3SY84 523 aa11.84□□□□□ -0.51
SMARCAL1-203ENST00000392128 FAM72AQ5TYM5 149 aa11.84□□□□□ -0.51
SMARCAL1-203ENST00000392128 SDHAF4Q5VUM1 108 aa11.84□□□□□ -0.51
SMARCAL1-203ENST00000392128 SLC8B1Q6J4K2 584 aa11.84□□□□□ -0.51
SMARCAL1-203ENST00000392128 FAM72DQ6L9T8 149 aa11.84□□□□□ -0.51
SMARCAL1-203ENST00000392128 KCNT2Q6UVM3 1135 aa11.84□□□□□ -0.51
SMARCAL1-203ENST00000392128 RNF19BQ6ZMZ0 732 aa11.84□□□□□ -0.51
SMARCAL1-203ENST00000392128 B4GALNT4Q76KP1 1039 aa11.84□□□□□ -0.51
SMARCAL1-203ENST00000392128 FAM72BQ86X60 149 aa11.84□□□□□ -0.51
SMARCAL1-203ENST00000392128 OSBPL2Q9H1P3 480 aa11.84□□□□□ -0.51
SMARCAL1-203ENST00000392128 RC3H2Q9HBD1 1191 aaKnown RBP11.84□□□□□ -0.51
SMARCAL1-203ENST00000392128 DNAJC17Q9NVM6 304 aaKnown RBP11.84□□□□□ -0.51
SMARCAL1-203ENST00000392128 NINJ2Q9NZG7 142 aa11.84□□□□□ -0.51
SMARCAL1-203ENST00000392128 MTRRQ9UBK8 725 aa11.84□□□□□ -0.51
SMARCAL1-203ENST00000392128 MFHAS1Q9Y4C4 1052 aa11.84□□□□□ -0.51
SMARCAL1-203ENST00000392128 BACE2Q9Y5Z0 518 aa11.84□□□□□ -0.51
SMARCAL1-203ENST00000392128 RAD54BQ9Y620 910 aa11.84□□□□□ -0.51
SMARCAL1-203ENST00000392128 TRIM43BA6NCK2 446 aa11.83□□□□□ -0.52
SMARCAL1-203ENST00000392128 RTN3O95197 1032 aaPredicted RBP11.83□□□□□ -0.52
SMARCAL1-203ENST00000392128 ITGB8P26012 769 aa11.83□□□□□ -0.52
SMARCAL1-203ENST00000392128 MAGEA4P43358 317 aa11.83□□□□□ -0.52
SMARCAL1-203ENST00000392128 NRLP54845 237 aa11.83□□□□□ -0.52
SMARCAL1-203ENST00000392128 USP46P62068 366 aa11.83□□□□□ -0.52
SMARCAL1-203ENST00000392128 MSANTD2Q6P1R3 559 aa11.83□□□□□ -0.52
SMARCAL1-203ENST00000392128 PRSS55Q6UWB4 352 aaPredicted RBP11.83□□□□□ -0.52
SMARCAL1-203ENST00000392128 DENND5BQ6ZUT9 1274 aa11.83□□□□□ -0.52
SMARCAL1-203ENST00000392128 CENPUQ71F23 418 aa11.83□□□□□ -0.52
SMARCAL1-203ENST00000392128 NECAB2Q7Z6G3 386 aa11.83□□□□□ -0.52
SMARCAL1-203ENST00000392128 FBXO22Q8NEZ5 403 aa11.83□□□□□ -0.52
SMARCAL1-203ENST00000392128 TFB1MQ8WVM0 346 aaKnown RBP11.83□□□□□ -0.52
SMARCAL1-203ENST00000392128 TRIM43Q96BQ3 446 aaPredicted RBP11.83□□□□□ -0.52
SMARCAL1-203ENST00000392128 EPAS1Q99814 870 aa11.83□□□□□ -0.52
SMARCAL1-203ENST00000392128 VN1R3Q9BXE9 311 aa11.83□□□□□ -0.52
SMARCAL1-203ENST00000392128 CHADO15335 359 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 GCATO75600 419 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 ZNF189O75820 626 aaPredicted RBP11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 ACSL3O95573 720 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 BASP1P80723 227 aaKnown RBP11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 PPP2R5DQ14738 602 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 KYNUQ16719 465 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 ANKRD22Q5VYY1 191 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 KCTD16Q68DU8 428 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 PDZD4Q76G19 769 aaPredicted RBP11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 CASP10Q92851 521 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 RNF34Q969K3 372 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 CEP295NLQ96MC4 621 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 TTC25Q96NG3 672 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 SERPINB11Q96P15 392 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 HAPLN3Q96S86 360 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 ROPN1BQ9BZX4 212 aaPredicted RBP11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 CRISPLD1Q9H336 500 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 ROPN1Q9HAT0 212 aaPredicted RBP11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 SAYSD1Q9NPB0 183 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 OSER1Q9NX31 292 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 PSD3Q9NYI0 1048 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 OR12D3Q9UGF7 316 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 CDY1Q9Y6F8 540 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 CARNS1A5YM72 827 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 C5orf60A6NFR6 353 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 ALOX15BO15296 676 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 EIF3HO15372 352 aaKnown RBP eCLIP11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 ABHD2P08910 425 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 CSF2RAP15509 400 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 ERCC2P18074 760 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 YWHAQP27348 245 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 CCR1P32246 355 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 MAGEA6P43360 314 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 PSEN1P49768 467 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 ARL4CP56559 192 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 C1QTNF8P60827 252 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 RPL10AP62906 217 aaKnown RBP11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 KCNJ11Q14654 390 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 PDK1Q15118 436 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 PRKD1Q15139 912 aaPredicted RBP11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 PSMD5Q16401 504 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 HIF1AQ16665 826 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 MGAT5BQ3V5L5 792 aa11.82□□□□□ -0.52
SMARCAL1-203ENST00000392128 EMC10Q5UCC4 262 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms