RNA–Protein interactions for RNA: ENST00000391248.1

RNU1-78P-201, Transcript of RNA, U1 small nuclear 78, pseudogene, humanhuman

BASIC

Gene RNU1-78P, Length 165 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-78P-201ENST00000391248 IQCB1Q15051 598 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 SF3B3Q15393 1217 aaKnown RBP1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 LY6KQ17RY6 165 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 INSCQ1MX18 579 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 SKIDA1Q1XH10 827 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 MST1LQ2TV78 715 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 CR1LQ2VPA4 569 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 HFEQ30201 348 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 FBXO43Q4G163 708 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 NHSL2Q5HYW2 709 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 FAM47AQ5JRC9 791 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 RALGPS1Q5JS13 557 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 SH2D4BQ5SQS7 431 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 PLEKHS1Q5SXH7 462 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 ERMARDQ5T6L9 678 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 ARHGAP40Q5TG30 622 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 GKAP1Q5VSY0 366 aaPredicted RBP1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 FAM160B1Q5W0V3 765 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 AFMIDQ63HM1 303 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 KANK2Q63ZY3 851 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 ANKRD40Q6AI12 368 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 ABLIM2Q6H8Q1 611 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 KIAA0930Q6ICG6 404 aaPredicted RBP1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 NAPEPLDQ6IQ20 393 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 IRGCQ6NXR0 463 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 MSANTD2Q6P1R3 559 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 GALNT18Q6P9A2 607 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 C11orf88Q6PI97 169 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 USP17L6PQ6QN14 398 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 TMEM270Q6UE05 265 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 TEPPQ6URK8 271 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 LYPD4Q6UWN0 246 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 KIAA1324Q6UXG2 1013 aaKnown RBP1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 C22orf34Q6ZV56 151 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 GPRIN1Q7Z2K8 1008 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 RABEPKQ7Z6M1 372 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 ZAR1Q86SH2 424 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 TRABD2AQ86V40 505 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 PLXDC1Q8IUK5 500 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 CLEC10AQ8IUN9 316 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 CNTN4Q8IWV2 1026 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 SPACA3Q8IXA5 215 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 THNSL1Q8IYQ7 743 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 ADGRF2Q8IZF7 708 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 ZDHHC14Q8IZN3 488 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 FAM185AQ8N0U4 392 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 SFRP1Q8N474 314 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 AOPEPQ8N6M6 819 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 C10orf53Q8N6V4 93 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 PLD5Q8N7P1 536 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 LSM14AQ8ND56 463 aaKnown RBP1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 NEDD1Q8NHV4 660 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 MAFAQ8NHW3 353 aaPredicted RBP1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 CTCFLQ8NI51 663 aaPredicted RBP1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 KIF18AQ8NI77 898 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 DCAF11Q8TEB1 546 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 DENND1AQ8TEH3 1009 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 CLEC4CQ8WTT0 213 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 TMEM171Q8WVE6 324 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 ZNF606Q8WXB4 792 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 MRPS27Q92552 414 aaKnown RBP1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 NKD2Q969F2 451 aaPredicted RBP1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 ARRDC3Q96B67 414 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 TMCO6Q96DC7 493 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 RNFT2Q96EX2 444 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 CEP95Q96GE4 821 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 MASTLQ96GX5 879 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 PDLIM5Q96HC4 596 aaKnown RBP1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 LRIG1Q96JA1 1093 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 VPS39Q96JC1 886 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 PHACTR3Q96KR7 559 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 MYRFLQ96LU7 910 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 MFSD14AQ96MC6 490 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 GDAP1L1Q96MZ0 367 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 SLC46A1Q96NT5 459 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 HIST1H2AAQ96QV6 131 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 CD180Q99467 661 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 FAM83CQ9BQN1 747 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 MESP1Q9BRJ9 268 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 NAA11Q9BSU3 229 aaPredicted RBP1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 NDC1Q9BTX1 674 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 TTPALQ9BTX7 342 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 TUBB6Q9BUF5 446 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 MRI1Q9BV20 369 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 SPATA5L1Q9BVQ7 753 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 CCDC106Q9BWC9 280 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 MAK16Q9BXY0 300 aaKnown RBP1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 CEP41Q9BYV8 373 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 TRIM6Q9C030 488 aaPredicted RBP1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 TTYH3Q9C0H2 523 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 PCED1AQ9H1Q7 454 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 SLC25A32Q9H2D1 315 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 MROH8Q9H579 483 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 C19orf44Q9H6X5 657 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 ZNF552Q9H707 407 aaPredicted RBP1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 USP29Q9HBJ7 922 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 LRRC4CQ9HCJ2 640 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 PALMDQ9NP74 551 aa1.62□□□□□ -2.15
RNU1-78P-201ENST00000391248 MID1IP1Q9NPA3 183 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms