RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 EDRF1Q3B7T1 1238 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 ZNF568Q3ZCX4 644 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 FNDC3BQ53EP0 1204 aaKnown RBP7.83□□□□□ -1.16
TRBV28-201ENST00000390400 ANKRD40Q6AI12 368 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 SLFN12LQ6IEE8 588 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 CENPPQ6IPU0 288 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 MFSD5Q6N075 450 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 MPZL3Q6UWV2 235 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 SEZ6L2Q6UXD5 910 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 FAM43BQ6ZT52 329 aaPredicted RBP7.83□□□□□ -1.16
TRBV28-201ENST00000390400 FGD2Q7Z6J4 655 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 ADAT2Q7Z6V5 191 aaKnown RBP7.83□□□□□ -1.16
TRBV28-201ENST00000390400 SCUBE1Q8IWY4 988 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 SYCE1Q8N0S2 351 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 TMEM199Q8N511 208 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 ENDOVQ8N8Q3 282 aaKnown RBP7.83□□□□□ -1.16
TRBV28-201ENST00000390400 KCT2Q8NC54 265 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 FAM81AQ8TBF8 368 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 POMGNT1Q8WZA1 660 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 RAPGEF5Q92565 580 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 SEPT8Q92599 483 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 TAF4BQ92750 862 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 DPF3Q92784 378 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 INPP5DQ92835 1189 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 NAF1Q96HR8 494 aaKnown RBP7.83□□□□□ -1.16
TRBV28-201ENST00000390400 SCLYQ96I15 445 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 CPB2Q96IY4 423 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 CAPZA3Q96KX2 299 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 ADPGKQ9BRR6 497 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 TCHPQ9BT92 498 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 TLR10Q9BXR5 811 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 ROPN1BQ9BZX4 212 aaPredicted RBP7.83□□□□□ -1.16
TRBV28-201ENST00000390400 MIS12Q9H081 205 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 IKZF4Q9H2S9 585 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 SEMA6CQ9H3T2 930 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 SEMA6BQ9H3T3 888 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 PDZD7Q9H5P4 517 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 KIF9Q9HAQ2 790 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 ROPN1Q9HAT0 212 aaPredicted RBP7.83□□□□□ -1.16
TRBV28-201ENST00000390400 EPB41L5Q9HCM4 733 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 AGPAT3Q9NRZ7 376 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 TXLNGQ9NUQ3 528 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.83□□□□□ -1.16
TRBV28-201ENST00000390400 IL1RAPL1Q9NZN1 696 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 BAIAP2L1Q9UHR4 511 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 PCOLCE2Q9UKZ9 415 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 PADI3Q9ULW8 664 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 TRAF3IP3Q9Y228 551 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 TNFSF13BQ9Y275 285 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 SSX2IPQ9Y2D8 614 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 ATP8A1Q9Y2Q0 1164 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 SH3BP1Q9Y3L3 701 aa7.83□□□□□ -1.16
TRBV28-201ENST00000390400 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.83□□□□□ -1.16
TRBV28-201ENST00000390400 A0A0B4J269 797 aa7.82□□□□□ -1.16
TRBV28-201ENST00000390400 CCDC163A0A0D9SF12 145 aa7.82□□□□□ -1.16
TRBV28-201ENST00000390400 TRIM49BA6NDI0 452 aa7.82□□□□□ -1.16
TRBV28-201ENST00000390400 TISP43B9A030 160 aa7.82□□□□□ -1.16
TRBV28-201ENST00000390400 ANKRD63C9JTQ0 380 aa7.82□□□□□ -1.16
TRBV28-201ENST00000390400 CITO14578 2027 aa7.82□□□□□ -1.16
TRBV28-201ENST00000390400 KIAA0391O15091 583 aaKnown RBP7.82□□□□□ -1.16
TRBV28-201ENST00000390400 CLDN3O15551 220 aa7.82□□□□□ -1.16
TRBV28-201ENST00000390400 TGFB1I1O43294 461 aa7.82□□□□□ -1.16
TRBV28-201ENST00000390400 OAS1P00973 400 aaKnown RBP7.82□□□□□ -1.16
TRBV28-201ENST00000390400 CXCL10P02778 98 aa7.82□□□□□ -1.16
TRBV28-201ENST00000390400 NFICP08651 508 aa7.82□□□□□ -1.16
TRBV28-201ENST00000390400 MCF2P10911 925 aa7.82□□□□□ -1.16
TRBV28-201ENST00000390400 HARSP12081 509 aaKnown RBP7.82□□□□□ -1.16
TRBV28-201ENST00000390400 PROZP22891 400 aa7.82□□□□□ -1.16
TRBV28-201ENST00000390400 HOXA11P31270 313 aaPredicted RBP7.82□□□□□ -1.16
TRBV28-201ENST00000390400 HSD17B3P37058 310 aa7.82□□□□□ -1.16
TRBV28-201ENST00000390400 CYP2J2P51589 502 aa7.82□□□□□ -1.16
TRBV28-201ENST00000390400 FKBP3Q00688 224 aaKnown RBP7.82□□□□□ -1.16
TRBV28-201ENST00000390400 KLC1Q07866 573 aa7.82□□□□□ -1.16
TRBV28-201ENST00000390400 ZNF844Q08AG5 666 aa7.82□□□□□ -1.16
TRBV28-201ENST00000390400 BNIP1Q12981 228 aa7.82□□□□□ -1.16
TRBV28-201ENST00000390400 MTA1Q13330 715 aa7.82□□□□□ -1.16
TRBV28-201ENST00000390400 MYBPC2Q14324 1141 aa7.82□□□□□ -1.16
TRBV28-201ENST00000390400 NAB2Q15742 525 aa7.82□□□□□ -1.16
TRBV28-201ENST00000390400 NFIL3Q16649 462 aa7.82□□□□□ -1.16
TRBV28-201ENST00000390400 ASTE1Q2TB18 679 aaPredicted RBP7.82□□□□□ -1.16
TRBV28-201ENST00000390400 DCAF4L1Q3SXM0 396 aa7.82□□□□□ -1.16
TRBV28-201ENST00000390400 ZCWPW2Q504Y3 356 aa7.82□□□□□ -1.16
TRBV28-201ENST00000390400 LRRC23Q53EV4 343 aaPredicted RBP7.82□□□□□ -1.16
TRBV28-201ENST00000390400 SGO2Q562F6 1265 aa7.82□□□□□ -1.16
TRBV28-201ENST00000390400 ANKRD20A2Q5SQ80 823 aa7.82□□□□□ -1.16
TRBV28-201ENST00000390400 WASHC2DQ5SRD0 308 aa7.82□□□□□ -1.16
TRBV28-201ENST00000390400 ANKRD20A1Q5TYW2 823 aa7.82□□□□□ -1.16
TRBV28-201ENST00000390400 ANKRD20A3Q5VUR7 823 aa7.82□□□□□ -1.16
TRBV28-201ENST00000390400 EEF1DP3Q658K8 133 aa7.82□□□□□ -1.16
TRBV28-201ENST00000390400 TWF2Q6IBS0 349 aaKnown RBP7.82□□□□□ -1.16
TRBV28-201ENST00000390400 TTI2Q6NXR4 508 aa7.82□□□□□ -1.16
TRBV28-201ENST00000390400 LETMD1Q6P1Q0 360 aa7.82□□□□□ -1.16
TRBV28-201ENST00000390400 SLC39A4Q6P5W5 647 aa7.82□□□□□ -1.16
TRBV28-201ENST00000390400 SLC27A1Q6PCB7 646 aa7.82□□□□□ -1.16
TRBV28-201ENST00000390400 MICAL3Q7RTP6 2002 aa7.82□□□□□ -1.16
TRBV28-201ENST00000390400 SPATA21Q7Z572 469 aa7.82□□□□□ -1.16
TRBV28-201ENST00000390400 ARHGAP22Q7Z5H3 698 aa7.82□□□□□ -1.16
TRBV28-201ENST00000390400 DEFB128Q7Z7B8 93 aa7.82□□□□□ -1.16
TRBV28-201ENST00000390400 IRF2BP1Q8IU81 584 aa7.82□□□□□ -1.16
TRBV28-201ENST00000390400 TRIM59Q8IWR1 403 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms