RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 KPNB1Q14974 876 aaKnown RBP3.78□□□□□ -1.8
RNU6-39P-201ENST00000384344 KRT72Q14CN4 511 aa3.78□□□□□ -1.8
RNU6-39P-201ENST00000384344 TBRG1Q3YBR2 411 aa3.78□□□□□ -1.8
RNU6-39P-201ENST00000384344 ANKRD40Q6AI12 368 aa3.78□□□□□ -1.8
RNU6-39P-201ENST00000384344 SLC18B1Q6NT16 456 aa3.78□□□□□ -1.8
RNU6-39P-201ENST00000384344 MSANTD2Q6P1R3 559 aa3.78□□□□□ -1.8
RNU6-39P-201ENST00000384344 ZNF66Q6ZN08 573 aa3.78□□□□□ -1.8
RNU6-39P-201ENST00000384344 RAB11FIP2Q7L804 512 aa3.78□□□□□ -1.8
RNU6-39P-201ENST00000384344 YTHDF3Q7Z739 585 aaKnown RBP3.78□□□□□ -1.8
RNU6-39P-201ENST00000384344 NEK8Q86SG6 692 aa3.78□□□□□ -1.8
RNU6-39P-201ENST00000384344 SRRM1Q8IYB3 904 aaKnown RBP3.78□□□□□ -1.8
RNU6-39P-201ENST00000384344 PRSS3P2Q8NHM4 247 aa3.78□□□□□ -1.8
RNU6-39P-201ENST00000384344 PNISRQ8TF01 805 aaKnown RBP3.78□□□□□ -1.8
RNU6-39P-201ENST00000384344 SLC22A17Q8WUG5 538 aa3.78□□□□□ -1.8
RNU6-39P-201ENST00000384344 STYXQ8WUJ0 223 aa3.78□□□□□ -1.8
RNU6-39P-201ENST00000384344 DDB2Q92466 427 aa3.78□□□□□ -1.8
RNU6-39P-201ENST00000384344 TRIM63Q969Q1 353 aa3.78□□□□□ -1.8
RNU6-39P-201ENST00000384344 EID2BQ96D98 161 aa3.78□□□□□ -1.8
RNU6-39P-201ENST00000384344 PAAF1Q9BRP4 392 aa3.78□□□□□ -1.8
RNU6-39P-201ENST00000384344 RTKNQ9BST9 563 aa3.78□□□□□ -1.8
RNU6-39P-201ENST00000384344 BRD8Q9H0E9 1235 aa3.78□□□□□ -1.8
RNU6-39P-201ENST00000384344 CCDC134Q9H6E4 229 aa3.78□□□□□ -1.8
RNU6-39P-201ENST00000384344 PRDM16Q9HAZ2 1276 aa3.78□□□□□ -1.8
RNU6-39P-201ENST00000384344 IPO11Q9UI26 975 aaKnown RBP3.78□□□□□ -1.8
RNU6-39P-201ENST00000384344 WIPF3A6NGB9 483 aa3.77□□□□□ -1.81
RNU6-39P-201ENST00000384344 INPPL1O15357 1258 aa3.77□□□□□ -1.81
RNU6-39P-201ENST00000384344 ACTL6BO94805 426 aa3.77□□□□□ -1.81
RNU6-39P-201ENST00000384344 CER1O95813 267 aa3.77□□□□□ -1.81
RNU6-39P-201ENST00000384344 LATS1O95835 1130 aa3.77□□□□□ -1.81
RNU6-39P-201ENST00000384344 ALDOAP04075 364 aaKnown RBP3.77□□□□□ -1.81
RNU6-39P-201ENST00000384344 PRR35P0CG20 571 aa3.77□□□□□ -1.81
RNU6-39P-201ENST00000384344 KLRK1P26718 216 aa3.77□□□□□ -1.81
RNU6-39P-201ENST00000384344 GRK5P34947 590 aa3.77□□□□□ -1.81
RNU6-39P-201ENST00000384344 HOXD12P35452 270 aa3.77□□□□□ -1.81
RNU6-39P-201ENST00000384344 MMP13P45452 471 aa3.77□□□□□ -1.81
RNU6-39P-201ENST00000384344 ABCG1P45844 678 aa3.77□□□□□ -1.81
RNU6-39P-201ENST00000384344 PLCD1P51178 756 aa3.77□□□□□ -1.81
RNU6-39P-201ENST00000384344 SLC12A2P55011 1212 aa3.77□□□□□ -1.81
RNU6-39P-201ENST00000384344 RPS6KA2Q15349 733 aa3.77□□□□□ -1.81
RNU6-39P-201ENST00000384344 SLC9C1Q4G0N8 1177 aa3.77□□□□□ -1.81
RNU6-39P-201ENST00000384344 AWAT1Q58HT5 328 aa3.77□□□□□ -1.81
RNU6-39P-201ENST00000384344 MTX3Q5HYI7 312 aa3.77□□□□□ -1.81
RNU6-39P-201ENST00000384344 CEP78Q5JTW2 689 aa3.77□□□□□ -1.81
RNU6-39P-201ENST00000384344 C10orf62Q5T681 223 aaPredicted RBP3.77□□□□□ -1.81
RNU6-39P-201ENST00000384344 NFRKBQ6P4R8 1299 aa3.77□□□□□ -1.81
RNU6-39P-201ENST00000384344 TMEM88Q6PEY1 159 aa3.77□□□□□ -1.81
RNU6-39P-201ENST00000384344 RFX8Q6ZV50 586 aa3.77□□□□□ -1.81
RNU6-39P-201ENST00000384344 ZNF398Q8TD17 642 aa3.77□□□□□ -1.81
RNU6-39P-201ENST00000384344 HMGB4Q8WW32 186 aa3.77□□□□□ -1.81
RNU6-39P-201ENST00000384344 ASB12Q8WXK4 309 aa3.77□□□□□ -1.81
RNU6-39P-201ENST00000384344 CPT1BQ92523 772 aa3.77□□□□□ -1.81
RNU6-39P-201ENST00000384344 PIGKQ92643 395 aa3.77□□□□□ -1.81
RNU6-39P-201ENST00000384344 KAT2BQ92831 832 aa3.77□□□□□ -1.81
RNU6-39P-201ENST00000384344 SLC39A13Q96H72 371 aa3.77□□□□□ -1.81
RNU6-39P-201ENST00000384344 PRR11Q96HE9 360 aaPredicted RBP3.77□□□□□ -1.81
RNU6-39P-201ENST00000384344 ERVK-5Q9HDB9 667 aa3.77□□□□□ -1.81
RNU6-39P-201ENST00000384344 KCNK9Q9NPC2 374 aa3.77□□□□□ -1.81
RNU6-39P-201ENST00000384344 FSCN3Q9NQT6 498 aa3.77□□□□□ -1.81
RNU6-39P-201ENST00000384344 LIN7CQ9NUP9 197 aaKnown RBP3.77□□□□□ -1.81
RNU6-39P-201ENST00000384344 SCAF8Q9UPN6 1271 aaKnown RBP3.77□□□□□ -1.81
RNU6-39P-201ENST00000384344 EMSYQ7Z589 1322 aa3.76□□□□□ -1.81
RNU6-39P-201ENST00000384344 TBC1D3DA0A087WVF3 549 aa3.76□□□□□ -1.81
RNU6-39P-201ENST00000384344 TBC1D3IA0A087WXS9 549 aa3.76□□□□□ -1.81
RNU6-39P-201ENST00000384344 TBC1D3EA0A087X179 549 aa3.76□□□□□ -1.81
RNU6-39P-201ENST00000384344 CYP2D7A0A087X1C5 515 aa3.76□□□□□ -1.81
RNU6-39P-201ENST00000384344 TBC1D3KA0A087X1G2 549 aa3.76□□□□□ -1.81
RNU6-39P-201ENST00000384344 TBC1D3BA6NDS4 549 aa3.76□□□□□ -1.81
RNU6-39P-201ENST00000384344 TBC1D3FA6NER0 549 aaPredicted RBP3.76□□□□□ -1.81
RNU6-39P-201ENST00000384344 KCNU1A8MYU2 1149 aa3.76□□□□□ -1.81
RNU6-39P-201ENST00000384344 TBC1D3LB9A6J9 549 aa3.76□□□□□ -1.81
RNU6-39P-201ENST00000384344 ACKR2O00590 384 aa3.76□□□□□ -1.81
RNU6-39P-201ENST00000384344 TRIM38O00635 465 aa3.76□□□□□ -1.81
RNU6-39P-201ENST00000384344 NKX2-8O15522 239 aa3.76□□□□□ -1.81
RNU6-39P-201ENST00000384344 DHHO43323 396 aa3.76□□□□□ -1.81
RNU6-39P-201ENST00000384344 RPP40O75818 363 aaKnown RBP3.76□□□□□ -1.81
RNU6-39P-201ENST00000384344 TNFRSF6BO95407 300 aa3.76□□□□□ -1.81
RNU6-39P-201ENST00000384344 MBPP02686 304 aaPredicted RBP3.76□□□□□ -1.81
RNU6-39P-201ENST00000384344 ENO1P06733 434 aaKnown RBP3.76□□□□□ -1.81
RNU6-39P-201ENST00000384344 TBC1D3HP0C7X1 549 aa3.76□□□□□ -1.81
RNU6-39P-201ENST00000384344 ATF7P17544 494 aaPredicted RBP3.76□□□□□ -1.81
RNU6-39P-201ENST00000384344 SERPINF1P36955 418 aa3.76□□□□□ -1.81
RNU6-39P-201ENST00000384344 ARHGAP25P42331 645 aa3.76□□□□□ -1.81
RNU6-39P-201ENST00000384344 AGTR2P50052 363 aa3.76□□□□□ -1.81
RNU6-39P-201ENST00000384344 RPS13P62277 151 aaKnown RBP3.76□□□□□ -1.81
RNU6-39P-201ENST00000384344 AP2B1P63010 937 aa3.76□□□□□ -1.81
RNU6-39P-201ENST00000384344 TLE3Q04726 772 aa3.76□□□□□ -1.81
RNU6-39P-201ENST00000384344 RNASELQ05823 741 aaKnown RBP3.76□□□□□ -1.81
RNU6-39P-201ENST00000384344 FOXO1Q12778 655 aa3.76□□□□□ -1.81
RNU6-39P-201ENST00000384344 SF3A3Q12874 501 aaKnown RBP eCLIP3.76□□□□□ -1.815e-6■■□□□ 14.3
RNU6-39P-201ENST00000384344 MTA1Q13330 715 aa3.76□□□□□ -1.81
RNU6-39P-201ENST00000384344 AAK1Q2M2I8 961 aa3.76□□□□□ -1.81
RNU6-39P-201ENST00000384344 GRAMD1BQ3KR37 738 aa3.76□□□□□ -1.81
RNU6-39P-201ENST00000384344 MORN5Q5VZ52 161 aa3.76□□□□□ -1.81
RNU6-39P-201ENST00000384344 TBC1D3GQ6DHY5 549 aa3.76□□□□□ -1.81
RNU6-39P-201ENST00000384344 TBC1D3CQ6IPX1 549 aa3.76□□□□□ -1.81
RNU6-39P-201ENST00000384344 LAS2Q8IYD9 372 aa3.76□□□□□ -1.81
RNU6-39P-201ENST00000384344 TBC1D3Q8IZP1 549 aaPredicted RBP3.76□□□□□ -1.81
RNU6-39P-201ENST00000384344 NTN5Q8WTR8 489 aaPredicted RBP3.76□□□□□ -1.81
RNU6-39P-201ENST00000384344 CCT6BQ92526 530 aa3.76□□□□□ -1.81
RNU6-39P-201ENST00000384344 NPIPB3Q92617 1050 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms