RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 MAN2B1O00754 1011 aa12.38□□□□□ -0.43
PCNA-201ENST00000379143 ENDOD1O94919 500 aa12.38□□□□□ -0.43
PCNA-201ENST00000379143 IPO7O95373 1038 aaKnown RBP12.38□□□□□ -0.43
PCNA-201ENST00000379143 H2AFZP0C0S5 128 aa12.38□□□□□ -0.43
PCNA-201ENST00000379143 RDXP35241 583 aaKnown RBP12.38□□□□□ -0.43
PCNA-201ENST00000379143 ZNF143P52747 638 aaPredicted RBP12.38□□□□□ -0.43
PCNA-201ENST00000379143 GALCP54803 685 aa12.38□□□□□ -0.43
PCNA-201ENST00000379143 PITX1P78337 314 aaPredicted RBP12.38□□□□□ -0.43
PCNA-201ENST00000379143 TNK2Q07912 1038 aa12.38□□□□□ -0.43
PCNA-201ENST00000379143 MLF2Q15773 248 aaPredicted RBP12.38□□□□□ -0.43
PCNA-201ENST00000379143 ADGRF1Q5T601 910 aa12.38□□□□□ -0.43
PCNA-201ENST00000379143 TRIM67Q6ZTA4 783 aa12.38□□□□□ -0.43
PCNA-201ENST00000379143 H2AFVQ71UI9 128 aa12.38□□□□□ -0.43
PCNA-201ENST00000379143 BNIPLQ7Z465 357 aa12.38□□□□□ -0.43
PCNA-201ENST00000379143 RALGPS2Q86X27 583 aaPredicted RBP12.38□□□□□ -0.43
PCNA-201ENST00000379143 FAM217AQ8IXS0 508 aa12.38□□□□□ -0.43
PCNA-201ENST00000379143 CPXM2Q8N436 756 aa12.38□□□□□ -0.43
PCNA-201ENST00000379143 JOSD2Q8TAC2 188 aa12.38□□□□□ -0.43
PCNA-201ENST00000379143 FNIP1Q8TF40 1166 aa12.38□□□□□ -0.43
PCNA-201ENST00000379143 WBP2Q969T9 261 aa12.38□□□□□ -0.43
PCNA-201ENST00000379143 TBCBQ99426 244 aa12.38□□□□□ -0.43
PCNA-201ENST00000379143 BAG1Q99933 345 aaPredicted RBP12.38□□□□□ -0.43
PCNA-201ENST00000379143 NCAPGQ9BPX3 1015 aa12.38□□□□□ -0.43
PCNA-201ENST00000379143 CNPY3Q9BT09 278 aa12.38□□□□□ -0.43
PCNA-201ENST00000379143 WDCPQ9H6R7 721 aa12.38□□□□□ -0.43
PCNA-201ENST00000379143 ARHGEF3Q9NR81 526 aa12.38□□□□□ -0.43
PCNA-201ENST00000379143 SPHK2Q9NRA0 654 aa12.38□□□□□ -0.43
PCNA-201ENST00000379143 HEBP1Q9NRV9 189 aa12.38□□□□□ -0.43
PCNA-201ENST00000379143 SPTLC3Q9NUV7 552 aa12.38□□□□□ -0.43
PCNA-201ENST00000379143 MYO1AQ9UBC5 1043 aa12.38□□□□□ -0.43
PCNA-201ENST00000379143 LCMT1Q9UIC8 334 aa12.38□□□□□ -0.43
PCNA-201ENST00000379143 INTUQ9ULD6 942 aa12.38□□□□□ -0.43
PCNA-201ENST00000379143 PIAS3Q9Y6X2 628 aa12.38□□□□□ -0.43
PCNA-201ENST00000379143 TICRRQ7Z2Z1 1910 aa12.38□□□□□ -0.43
PCNA-201ENST00000379143 COL4A2P08572 1712 aa12.38□□□□□ -0.43
PCNA-201ENST00000379143 SYNJ2BP-COX16A0A087WUM0 186 aa12.37□□□□□ -0.43
PCNA-201ENST00000379143 TMEM191CA6NGB0 347 aa12.37□□□□□ -0.43
PCNA-201ENST00000379143 KCNU1A8MYU2 1149 aa12.37□□□□□ -0.43
PCNA-201ENST00000379143 EIF3CLB5ME19 914 aaKnown RBP12.37□□□□□ -0.43
PCNA-201ENST00000379143 SCAMP3O14828 347 aaKnown RBP12.37□□□□□ -0.43
PCNA-201ENST00000379143 ATMINO43313 823 aaPredicted RBP12.37□□□□□ -0.43
PCNA-201ENST00000379143 ACSL4O60488 711 aa12.37□□□□□ -0.43
PCNA-201ENST00000379143 LCA5LO95447 670 aa12.37□□□□□ -0.43
PCNA-201ENST00000379143 GJB6O95452 261 aa12.37□□□□□ -0.43
PCNA-201ENST00000379143 CYBBP04839 570 aa12.37□□□□□ -0.43
PCNA-201ENST00000379143 CYP17A1P05093 508 aa12.37□□□□□ -0.43
PCNA-201ENST00000379143 CYP1A2P05177 515 aa12.37□□□□□ -0.43
PCNA-201ENST00000379143 TMEM253P0C7T8 217 aa12.37□□□□□ -0.43
PCNA-201ENST00000379143 ADH5P11766 374 aa12.37□□□□□ -0.43
PCNA-201ENST00000379143 ARSAP15289 507 aa12.37□□□□□ -0.43
PCNA-201ENST00000379143 CXCR3P49682 368 aa12.37□□□□□ -0.43
PCNA-201ENST00000379143 RPL7AP62424 266 aaKnown RBP12.37□□□□□ -0.43
PCNA-201ENST00000379143 ATP11AP98196 1134 aa12.37□□□□□ -0.43
PCNA-201ENST00000379143 GAD2Q05329 585 aa12.37□□□□□ -0.43
PCNA-201ENST00000379143 ACAP1Q15027 740 aa12.37□□□□□ -0.43
PCNA-201ENST00000379143 DHCR24Q15392 516 aa12.37□□□□□ -0.43
PCNA-201ENST00000379143 SPA17Q15506 151 aa12.37□□□□□ -0.43
PCNA-201ENST00000379143 CCDC14Q49A88 953 aa12.37□□□□□ -0.43
PCNA-201ENST00000379143 ZC3H12AQ5D1E8 599 aaKnown RBP12.37□□□□□ -0.43
PCNA-201ENST00000379143 TRNP1Q6NT89 227 aa12.37□□□□□ -0.43
PCNA-201ENST00000379143 ZNF852Q6ZMS4 543 aa12.37□□□□□ -0.43
PCNA-201ENST00000379143 DNAAF5Q86Y56 855 aa12.37□□□□□ -0.43
PCNA-201ENST00000379143 SIX5Q8N196 739 aa12.37□□□□□ -0.43
PCNA-201ENST00000379143 CENPIQ92674 756 aaPredicted RBP12.37□□□□□ -0.43
PCNA-201ENST00000379143 EIF3CQ99613 913 aaKnown RBP12.37□□□□□ -0.43
PCNA-201ENST00000379143 PIGVQ9NUD9 493 aa12.37□□□□□ -0.43
PCNA-201ENST00000379143 MARK1Q9P0L2 795 aa12.37□□□□□ -0.43
PCNA-201ENST00000379143 COX16Q9P0S2 106 aa12.37□□□□□ -0.43
PCNA-201ENST00000379143 UVRAGQ9P2Y5 699 aa12.37□□□□□ -0.43
PCNA-201ENST00000379143 CA14Q9ULX7 337 aa12.37□□□□□ -0.43
PCNA-201ENST00000379143 MRPS17Q9Y2R5 130 aaKnown RBP12.37□□□□□ -0.43
PCNA-201ENST00000379143 SPECC1L-ADORA2AF8WAN1 911 aa12.37□□□□□ -0.43
PCNA-201ENST00000379143 HOXC11O43248 304 aaPredicted RBP12.37□□□□□ -0.43
PCNA-201ENST00000379143 NRDCO43847 1150 aa12.37□□□□□ -0.43
PCNA-201ENST00000379143 RNF8O76064 485 aa12.37□□□□□ -0.43
PCNA-201ENST00000379143 NDUFA10O95299 355 aa12.37□□□□□ -0.43
PCNA-201ENST00000379143 STARD6P59095 220 aa12.37□□□□□ -0.43
PCNA-201ENST00000379143 CDO1Q16878 200 aa12.37□□□□□ -0.43
PCNA-201ENST00000379143 C15orf59Q2T9L4 293 aaPredicted RBP12.37□□□□□ -0.43
PCNA-201ENST00000379143 ARL13BQ3SXY8 428 aa12.37□□□□□ -0.43
PCNA-201ENST00000379143 PREPLQ4J6C6 727 aaPredicted RBP12.37□□□□□ -0.43
PCNA-201ENST00000379143 LY6G5CQ5SRR4 150 aa12.37□□□□□ -0.43
PCNA-201ENST00000379143 OTUD1Q5VV17 481 aaPredicted RBP12.37□□□□□ -0.43
PCNA-201ENST00000379143 RHBDF2Q6PJF5 856 aa12.37□□□□□ -0.43
PCNA-201ENST00000379143 TPRG1Q6ZUI0 275 aa12.37□□□□□ -0.43
PCNA-201ENST00000379143 RHOT2Q8IXI1 618 aa12.37□□□□□ -0.43
PCNA-201ENST00000379143 CCDC112Q8NEF3 446 aa12.37□□□□□ -0.43
PCNA-201ENST00000379143 FAM172AQ8WUF8 416 aa12.37□□□□□ -0.43
PCNA-201ENST00000379143 NELL2Q99435 816 aa12.37□□□□□ -0.43
PCNA-201ENST00000379143 MFSD1Q9H3U5 465 aa12.37□□□□□ -0.43
PCNA-201ENST00000379143 ARHGEF38Q9NXL2 777 aa12.37□□□□□ -0.43
PCNA-201ENST00000379143 EPN1Q9Y6I3 576 aaPredicted RBP12.37□□□□□ -0.43
PCNA-201ENST00000379143 CFAP54Q96N23 3096 aa12.36□□□□□ -0.43
PCNA-201ENST00000379143 TYW5A2RUC4 315 aaKnown RBP12.36□□□□□ -0.43
PCNA-201ENST00000379143 KRBA1A5PL33 1030 aa12.36□□□□□ -0.43
PCNA-201ENST00000379143 TMEM221A6NGB7 291 aa12.36□□□□□ -0.43
PCNA-201ENST00000379143 OTOL1A6NHN0 477 aaPredicted RBP12.36□□□□□ -0.43
PCNA-201ENST00000379143 SOWAHDA6NJG2 315 aa12.36□□□□□ -0.43
PCNA-201ENST00000379143 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.36□□□□□ -0.43
PCNA-201ENST00000379143 M0R296 226 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms