RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 UTP6Q9NYH9 597 aaKnown RBP8.45□□□□□ -1.06
PTPRR-203ENST00000378778 UBAP1Q9NZ09 502 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 VTI1BQ9UEU0 232 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 CNTNAP2Q9UHC6 1331 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 CCDC160A6NGH7 325 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 CAPN8A6NHC0 703 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 FAM155AB1AL88 458 aaPredicted RBP8.45□□□□□ -1.06
PTPRR-203ENST00000378778 G3V3G9 751 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 DDX39AO00148 427 aaKnown RBP8.45□□□□□ -1.06
PTPRR-203ENST00000378778 ITM2AO43736 263 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 TBC1D12O60347 775 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 OR6B1O95007 311 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 ATG7O95352 703 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 GDF11O95390 407 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 PGM3O95394 542 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 GSRP00390 522 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 HNRNPCP07910 306 aaKnown RBP eCLIP8.45□□□□□ -1.06
PTPRR-203ENST00000378778 CFHP08603 1231 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 PORP16435 677 aaPredicted RBP8.45□□□□□ -1.06
PTPRR-203ENST00000378778 GLDCP23378 1020 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 ALDH1B1P30837 517 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 HADHAP40939 763 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 NR2C2P49116 596 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 PPIL2Q13356 520 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 KCTD21Q4G0X4 260 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 SLC44A4Q53GD3 710 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 C2CD6Q53TS8 623 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 MDH1BQ5I0G3 518 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 RALGPS1Q5JS13 557 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 OLFML2BQ68BL8 750 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 TXNRD3NBQ6F5E7 133 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 ZPBP2Q6X784 338 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 UNC5AQ6ZN44 842 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 CAND1Q86VP6 1230 aaKnown RBP8.45□□□□□ -1.06
PTPRR-203ENST00000378778 METTL25Q8N6Q8 603 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 PACRGLQ8N7B6 248 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 ZNF420Q8TAQ5 688 aaPredicted RBP8.45□□□□□ -1.06
PTPRR-203ENST00000378778 DEPDC1BQ8WUY9 529 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 NLRP7Q8WX94 980 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 CNDP2Q96KP4 475 aaKnown RBP8.45□□□□□ -1.06
PTPRR-203ENST00000378778 CEP170P1Q96L14 293 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 SIGLEC10Q96LC7 697 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 FERMT1Q9BQL6 677 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 CNPY3Q9BT09 278 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 SLC13A1Q9BZW2 595 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 CDH19Q9H159 772 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 CCDC68Q9H2F9 335 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.45□□□□□ -1.06
PTPRR-203ENST00000378778 PNPLA3Q9NST1 481 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 ADGRA2Q96PE1 1338 aa8.45□□□□□ -1.06
PTPRR-203ENST00000378778 KANSL1LA0AUZ9 987 aa8.44□□□□□ -1.06
PTPRR-203ENST00000378778 MEI4A8MW99 385 aa8.44□□□□□ -1.06
PTPRR-203ENST00000378778 H7C0C1 242 aa8.44□□□□□ -1.06
PTPRR-203ENST00000378778 MATN2O00339 956 aa8.44□□□□□ -1.06
PTPRR-203ENST00000378778 ZBED1O96006 694 aa8.44□□□□□ -1.06
PTPRR-203ENST00000378778 KITP10721 976 aa8.44□□□□□ -1.06
PTPRR-203ENST00000378778 ME2P23368 584 aa8.44□□□□□ -1.06
PTPRR-203ENST00000378778 SLC5A2P31639 672 aa8.44□□□□□ -1.06
PTPRR-203ENST00000378778 PPARGP37231 505 aaPredicted RBP8.44□□□□□ -1.06
PTPRR-203ENST00000378778 ATP5OP48047 213 aa8.44□□□□□ -1.06
PTPRR-203ENST00000378778 ZNF143P52747 638 aaPredicted RBP8.44□□□□□ -1.06
PTPRR-203ENST00000378778 ESRRGP62508 458 aa8.44□□□□□ -1.06
PTPRR-203ENST00000378778 TRAP1Q12931 704 aaKnown RBP8.44□□□□□ -1.06
PTPRR-203ENST00000378778 SPP2Q13103 211 aa8.44□□□□□ -1.06
PTPRR-203ENST00000378778 USP4Q13107 963 aa8.44□□□□□ -1.06
PTPRR-203ENST00000378778 UGCGQ16739 394 aa8.44□□□□□ -1.06
PTPRR-203ENST00000378778 PIGGQ5H8A4 983 aa8.44□□□□□ -1.06
PTPRR-203ENST00000378778 CES4AQ5XG92 561 aa8.44□□□□□ -1.06
PTPRR-203ENST00000378778 POTEHQ6S545 545 aa8.44□□□□□ -1.06
PTPRR-203ENST00000378778 DENND5BQ6ZUT9 1274 aa8.44□□□□□ -1.06
PTPRR-203ENST00000378778 TAS1R3Q7RTX0 852 aa8.44□□□□□ -1.06
PTPRR-203ENST00000378778 CHERPQ8IWX8 916 aaKnown RBP8.44□□□□□ -1.06
PTPRR-203ENST00000378778 TSPAN14Q8NG11 270 aa8.44□□□□□ -1.06
PTPRR-203ENST00000378778 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.44□□□□□ -1.06
PTPRR-203ENST00000378778 ZNF597Q96LX8 424 aa8.44□□□□□ -1.06
PTPRR-203ENST00000378778 ZNF778Q96MU6 729 aa8.44□□□□□ -1.06
PTPRR-203ENST00000378778 RNF157Q96PX1 679 aa8.44□□□□□ -1.06
PTPRR-203ENST00000378778 TRIM56Q9BRZ2 755 aaKnown RBP8.44□□□□□ -1.06
PTPRR-203ENST00000378778 ZNF341Q9BYN7 854 aa8.44□□□□□ -1.06
PTPRR-203ENST00000378778 MRM3Q9HC36 420 aaKnown RBP8.44□□□□□ -1.06
PTPRR-203ENST00000378778 MORF4L1Q9UBU8 362 aa8.44□□□□□ -1.06
PTPRR-203ENST00000378778 CCPG1Q9ULG6 757 aa8.44□□□□□ -1.06
PTPRR-203ENST00000378778 USP18Q9UMW8 372 aa8.44□□□□□ -1.06
PTPRR-203ENST00000378778 FAF1Q9UNN5 650 aaPredicted RBP8.44□□□□□ -1.06
PTPRR-203ENST00000378778 SLC8A2Q9UPR5 921 aa8.44□□□□□ -1.06
PTPRR-203ENST00000378778 GNEQ9Y223 722 aaKnown RBP8.44□□□□□ -1.06
PTPRR-203ENST00000378778 DPYSL4O14531 572 aa8.44□□□□□ -1.06
PTPRR-203ENST00000378778 APOL1O14791 398 aa8.44□□□□□ -1.06
PTPRR-203ENST00000378778 ATP6V1G1O75348 118 aa8.44□□□□□ -1.06
PTPRR-203ENST00000378778 STBD1O95210 358 aa8.44□□□□□ -1.06
PTPRR-203ENST00000378778 H6PDO95479 791 aa8.44□□□□□ -1.06
PTPRR-203ENST00000378778 ERBB2P04626 1255 aa8.44□□□□□ -1.06
PTPRR-203ENST00000378778 MPOP05164 745 aa8.44□□□□□ -1.06
PTPRR-203ENST00000378778 C7P10643 843 aa8.44□□□□□ -1.06
PTPRR-203ENST00000378778 RALBP11234 206 aa8.44□□□□□ -1.06
PTPRR-203ENST00000378778 RFC1P35251 1148 aaPredicted RBP8.44□□□□□ -1.06
PTPRR-203ENST00000378778 MAGEA12P43365 314 aa8.44□□□□□ -1.06
PTPRR-203ENST00000378778 DYNLT1P63172 113 aa8.44□□□□□ -1.06
PTPRR-203ENST00000378778 UBXN2AP68543 259 aa8.44□□□□□ -1.06
PTPRR-203ENST00000378778 MRPS9P82933 396 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms