RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 CMC1Q7Z7K0 106 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 FAM35AQ86V20 835 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 RASSF3Q86WH2 238 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 CCDC117Q8IWD4 279 aaPredicted RBP8.37□□□□□ -1.07
CKAP2-203ENST00000378037 KIRREL3Q8IZU9 778 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 TNS4Q8IZW8 715 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 ATPAF2Q8N5M1 289 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 DCBLD1Q8N8Z6 715 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 ZNF296Q8WUU4 475 aaPredicted RBP8.37□□□□□ -1.07
CKAP2-203ENST00000378037 HNRNPLLQ8WVV9 542 aaKnown RBP8.37□□□□□ -1.07
CKAP2-203ENST00000378037 SOCS4Q8WXH5 440 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 UNC93B1Q9H1C4 597 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 ZNF395Q9H8N7 513 aaPredicted RBP8.37□□□□□ -1.07
CKAP2-203ENST00000378037 ZMYND8Q9ULU4 1186 aaPredicted RBP8.37□□□□□ -1.07
CKAP2-203ENST00000378037 TRIM33Q9UPN9 1127 aa8.37□□□□□ -1.07
CKAP2-203ENST00000378037 DNAJC25-GNG10A0A024R161 153 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 SIGLEC16A6NMB1 481 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 H3BRJ5 948 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 CA12O43570 354 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 MFSD11O43934 449 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 ATG7O95352 703 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 LCA5LO95447 670 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 TTC4O95801 387 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 ABCD1P33897 745 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 GRM5P41594 1212 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 CHRNA4P43681 627 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 CRYBB1P53674 252 aaPredicted RBP8.36□□□□□ -1.07
CKAP2-203ENST00000378037 ALDH18A1P54886 795 aaKnown RBP8.36□□□□□ -1.07
CKAP2-203ENST00000378037 RPL10AP62906 217 aaKnown RBP8.36□□□□□ -1.07
CKAP2-203ENST00000378037 SARNPP82979 210 aaKnown RBP8.36□□□□□ -1.07
CKAP2-203ENST00000378037 THOC5Q13769 683 aaKnown RBP8.36□□□□□ -1.07
CKAP2-203ENST00000378037 DUPD1Q68J44 220 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 TRMT10BQ6PF06 316 aaKnown RBP8.36□□□□□ -1.07
CKAP2-203ENST00000378037 ZNF598Q86UK7 904 aaKnown RBP8.36□□□□□ -1.07
CKAP2-203ENST00000378037 C12orf56Q8IXR9 622 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 FUKQ8N0W3 1084 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 SNX31Q8N9S9 440 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 MCUR1Q96AQ8 359 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 XPO6Q96QU8 1125 aaKnown RBP8.36□□□□□ -1.07
CKAP2-203ENST00000378037 EPAS1Q99814 870 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 PDLIM7Q9NR12 457 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 HAUS2Q9NVX0 235 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 COQ4Q9Y3A0 265 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 SSC5DA1L4H1 1573 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 BDP1A6H8Y1 2624 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 A0A087WUV0 522 aaPredicted RBP8.36□□□□□ -1.07
CKAP2-203ENST00000378037 FAM72CH0Y354 149 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 SCAMP1O15126 338 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 CRCPO75575 148 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 F2P00734 622 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 MYL4P12829 197 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 TCN1P20061 433 aaPredicted RBP8.36□□□□□ -1.07
CKAP2-203ENST00000378037 FECHP22830 423 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 ATP5DP30049 168 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 FAM72AQ5TYM5 149 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 FYB2Q5VWT5 728 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 FAM72DQ6L9T8 149 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 ZNF410Q86VK4 478 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 FAM72BQ86X60 149 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 TRPV1Q8NER1 839 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 DTX3LQ8TDB6 740 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 TFB1MQ8WVM0 346 aaKnown RBP8.36□□□□□ -1.07
CKAP2-203ENST00000378037 TMEM237Q96Q45 408 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 SMG9Q9H0W8 520 aaKnown RBP8.36□□□□□ -1.07
CKAP2-203ENST00000378037 HIPK3Q9H422 1215 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 IGFLR1Q9H665 355 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.36□□□□□ -1.07
CKAP2-203ENST00000378037 RBM22Q9NW64 420 aaKnown RBP eCLIP8.36□□□□□ -1.07
CKAP2-203ENST00000378037 DDX56Q9NY93 547 aaKnown RBP8.36□□□□□ -1.07
CKAP2-203ENST00000378037 BFARQ9NZS9 450 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 STXBP5LQ9Y2K9 1186 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 CRYL1Q9Y2S2 319 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 FAM47DPA6NHR8 397 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 ATP8B1O43520 1251 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 PSTPIP1O43586 416 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 MGEA5O60502 916 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 DUSP11O75319 330 aaKnown RBP8.36□□□□□ -1.07
CKAP2-203ENST00000378037 TMEM63AO94886 807 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 APOEP02649 317 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 CHRNA1P02708 482 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 ZNF865P0CJ78 1059 aaPredicted RBP8.36□□□□□ -1.07
CKAP2-203ENST00000378037 RPA3P35244 121 aaPredicted RBP8.36□□□□□ -1.07
CKAP2-203ENST00000378037 RTP1P59025 263 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 PRAMEP78395 509 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 TLE2Q04725 743 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 ZNF252P-AS1Q0IIN9 211 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 CCNG2Q16589 344 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 MSS51Q4VC12 460 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 CERCAMQ5T4B2 595 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 PLEKHA7Q6IQ23 1121 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 ARID3BQ8IVW6 561 aaPredicted RBP8.36□□□□□ -1.07
CKAP2-203ENST00000378037 HOMEZQ8IX15 550 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 MPP5Q8N3R9 675 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 NAT16Q8N8M0 369 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 PCSK9Q8NBP7 692 aaKnown RBP8.36□□□□□ -1.07
CKAP2-203ENST00000378037 SMC1BQ8NDV3 1235 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 MYCBPAPQ8TBZ2 947 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 ERP27Q96DN0 273 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 CHMP6Q96FZ7 201 aa8.36□□□□□ -1.07
CKAP2-203ENST00000378037 SNX27Q96L92 541 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms