RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 HADHBP55084 474 aaKnown RBP14.93□□□□□ -0.02
TCOF1-202ENST00000377797 OXCT1P55809 520 aa14.93□□□□□ -0.02
TCOF1-202ENST00000377797 MAP7Q14244 749 aa14.93□□□□□ -0.02
TCOF1-202ENST00000377797 SH2D4BQ5SQS7 431 aa14.93□□□□□ -0.02
TCOF1-202ENST00000377797 PGM2Q96G03 612 aa14.93□□□□□ -0.02
TCOF1-202ENST00000377797 RHOCP08134 193 aa14.93□□□□□ -0.02
TCOF1-202ENST00000377797 SDHAF4Q5VUM1 108 aa14.93□□□□□ -0.02
TCOF1-202ENST00000377797 TRIM68Q6AZZ1 485 aa14.93□□□□□ -0.02
TCOF1-202ENST00000377797 LRRN4Q8WUT4 740 aa14.93□□□□□ -0.02
TCOF1-202ENST00000377797 PRDM12Q9H4Q4 367 aa14.93□□□□□ -0.02
TCOF1-202ENST00000377797 ENTPD7Q9NQZ7 604 aa14.93□□□□□ -0.02
TCOF1-202ENST00000377797 TRIM33Q9UPN9 1127 aa14.93□□□□□ -0.02
TCOF1-202ENST00000377797 STXBP5LQ9Y2K9 1186 aa14.93□□□□□ -0.02
TCOF1-202ENST00000377797 TRIM66O15016 1216 aa14.92□□□□□ -0.02
TCOF1-202ENST00000377797 MTA2O94776 668 aa14.92□□□□□ -0.02
TCOF1-202ENST00000377797 F2P00734 622 aa14.92□□□□□ -0.02
TCOF1-202ENST00000377797 PAX3P23760 479 aa14.92□□□□□ -0.02
TCOF1-202ENST00000377797 OR1E1P30953 314 aa14.92□□□□□ -0.02
TCOF1-202ENST00000377797 PPP2R3CQ969Q6 453 aa14.92□□□□□ -0.02
TCOF1-202ENST00000377797 BRD8Q9H0E9 1235 aa14.92□□□□□ -0.02
TCOF1-202ENST00000377797 RENBPP51606 427 aa14.92□□□□□ -0.02
TCOF1-202ENST00000377797 CLNS1AP54105 237 aaKnown RBP14.92□□□□□ -0.02
TCOF1-202ENST00000377797 CHI3L2Q15782 390 aa14.92□□□□□ -0.02
TCOF1-202ENST00000377797 TAPT1Q6NXT6 567 aa14.92□□□□□ -0.02
TCOF1-202ENST00000377797 TRPM8Q7Z2W7 1104 aa14.92□□□□□ -0.02
TCOF1-202ENST00000377797 DDI1Q8WTU0 396 aa14.92□□□□□ -0.02
TCOF1-202ENST00000377797 DPEP3Q9H4B8 488 aa14.92□□□□□ -0.02
TCOF1-202ENST00000377797 DDX20Q9UHI6 824 aaKnown RBP14.92□□□□□ -0.02
TCOF1-202ENST00000377797 STYXL1Q9Y6J8 313 aa14.92□□□□□ -0.02
TCOF1-202ENST00000377797 CBX4O00257 560 aa14.92□□□□□ -0.02
TCOF1-202ENST00000377797 STX7O15400 261 aaKnown RBP14.92□□□□□ -0.02
TCOF1-202ENST00000377797 SHBGP04278 402 aa14.92□□□□□ -0.02
TCOF1-202ENST00000377797 POU6F1Q14863 301 aa14.92□□□□□ -0.02
TCOF1-202ENST00000377797 ART4Q93070 314 aa14.92□□□□□ -0.02
TCOF1-202ENST00000377797 ERP27Q96DN0 273 aa14.92□□□□□ -0.02
TCOF1-202ENST00000377797 LRGUKQ96M69 825 aa14.92□□□□□ -0.02
TCOF1-202ENST00000377797 PCDH18Q9HCL0 1135 aa14.92□□□□□ -0.02
TCOF1-202ENST00000377797 TRMT13Q9NUP7 481 aaKnown RBP14.92□□□□□ -0.02
TCOF1-202ENST00000377797 TRHDEQ9UKU6 1024 aa14.92□□□□□ -0.02
TCOF1-202ENST00000377797 MGAT1P26572 445 aa14.92□□□□□ -0.02
TCOF1-202ENST00000377797 ZNF135P52742 658 aaPredicted RBP14.92□□□□□ -0.02
TCOF1-202ENST00000377797 POU5F1Q01860 360 aaKnown RBP14.92□□□□□ -0.02
TCOF1-202ENST00000377797 MGAT5Q09328 741 aa14.92□□□□□ -0.02
TCOF1-202ENST00000377797 FAM187BQ17R55 369 aa14.92□□□□□ -0.02
TCOF1-202ENST00000377797 CPNE8Q86YQ8 564 aa14.92□□□□□ -0.02
TCOF1-202ENST00000377797 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.92□□□□□ -0.02
TCOF1-202ENST00000377797 HIPK4Q8NE63 616 aa14.92□□□□□ -0.02
TCOF1-202ENST00000377797 NDRG1Q92597 394 aaKnown RBP14.92□□□□□ -0.02
TCOF1-202ENST00000377797 ULK4Q96C45 1275 aa14.92□□□□□ -0.02
TCOF1-202ENST00000377797 IARS2Q9NSE4 1012 aaKnown RBP14.92□□□□□ -0.02
TCOF1-202ENST00000377797 ETNK2Q9NVF9 386 aa14.92□□□□□ -0.02
TCOF1-202ENST00000377797 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.92□□□□□ -0.02
TCOF1-202ENST00000377797 NRAPQ86VF7 1730 aa14.91□□□□□ -0.02
TCOF1-202ENST00000377797 TTLL13PA6NNM8 815 aa14.91□□□□□ -0.02
TCOF1-202ENST00000377797 MYL2P10916 166 aa14.91□□□□□ -0.02
TCOF1-202ENST00000377797 ERCC2P18074 760 aa14.91□□□□□ -0.02
TCOF1-202ENST00000377797 ST8SIA6P61647 398 aa14.91□□□□□ -0.02
TCOF1-202ENST00000377797 CRELD2Q6UXH1 353 aaPredicted RBP14.91□□□□□ -0.02
TCOF1-202ENST00000377797 STRA8Q7Z7C7 330 aa14.91□□□□□ -0.02
TCOF1-202ENST00000377797 SRLQ86TD4 932 aa14.91□□□□□ -0.02
TCOF1-202ENST00000377797 REM2Q8IYK8 340 aaPredicted RBP14.91□□□□□ -0.02
TCOF1-202ENST00000377797 CARNMT1Q8N4J0 409 aa14.91□□□□□ -0.02
TCOF1-202ENST00000377797 SGF29Q96ES7 293 aa14.91□□□□□ -0.02
TCOF1-202ENST00000377797 PPP1R36Q96LQ0 422 aa14.91□□□□□ -0.02
TCOF1-202ENST00000377797 RNF39Q9H2S5 420 aa14.91□□□□□ -0.02
TCOF1-202ENST00000377797 VPS28Q9UK41 221 aa14.91□□□□□ -0.02
TCOF1-202ENST00000377797 SYF2O95926 243 aaKnown RBP14.91□□□□□ -0.02
TCOF1-202ENST00000377797 PYGBP11216 843 aa14.91□□□□□ -0.02
TCOF1-202ENST00000377797 CYP3A5P20815 502 aa14.91□□□□□ -0.02
TCOF1-202ENST00000377797 LMO2P25791 158 aa14.91□□□□□ -0.02
TCOF1-202ENST00000377797 OVGP1Q12889 678 aa14.91□□□□□ -0.02
TCOF1-202ENST00000377797 HABP4Q5JVS0 413 aaKnown RBP14.91□□□□□ -0.02
TCOF1-202ENST00000377797 ARID3BQ8IVW6 561 aaPredicted RBP14.91□□□□□ -0.02
TCOF1-202ENST00000377797 MTBPQ96DY7 904 aa14.91□□□□□ -0.02
TCOF1-202ENST00000377797 ATXN3LQ9H3M9 355 aa14.91□□□□□ -0.02
TCOF1-202ENST00000377797 HMGXB4Q9UGU5 601 aa14.91□□□□□ -0.02
TCOF1-202ENST00000377797 SLC27A5Q9Y2P5 690 aa14.91□□□□□ -0.02
TCOF1-202ENST00000377797 CHKAP35790 457 aa14.91□□□□□ -0.02
TCOF1-202ENST00000377797 CDH17Q12864 832 aa14.91□□□□□ -0.02
TCOF1-202ENST00000377797 DDR2Q16832 855 aa14.91□□□□□ -0.02
TCOF1-202ENST00000377797 SLC25A52Q3SY17 297 aa14.91□□□□□ -0.02
TCOF1-202ENST00000377797 SPDYCQ5MJ68 293 aa14.91□□□□□ -0.02
TCOF1-202ENST00000377797 ANKRD20A2Q5SQ80 823 aa14.91□□□□□ -0.02
TCOF1-202ENST00000377797 ANKRD20A1Q5TYW2 823 aa14.91□□□□□ -0.02
TCOF1-202ENST00000377797 EPS15L1Q9UBC2 864 aa14.91□□□□□ -0.02
TCOF1-202ENST00000377797 AFF4Q9UHB7 1163 aaKnown RBP14.91□□□□□ -0.02
TCOF1-202ENST00000377797 LAMA4Q16363 1823 aa14.91□□□□□ -0.02
TCOF1-202ENST00000377797 A0A0A0MRY4 1105 aa14.91□□□□□ -0.02
TCOF1-202ENST00000377797 ARL5CA6NH57 179 aa14.91□□□□□ -0.02
TCOF1-202ENST00000377797 ADCY6O43306 1168 aa14.91□□□□□ -0.02
TCOF1-202ENST00000377797 TIMM44O43615 452 aa14.91□□□□□ -0.02
TCOF1-202ENST00000377797 AMHP03971 560 aa14.91□□□□□ -0.02
TCOF1-202ENST00000377797 CFHP08603 1231 aa14.91□□□□□ -0.02
TCOF1-202ENST00000377797 MPP3Q13368 585 aa14.91□□□□□ -0.02
TCOF1-202ENST00000377797 ARHGAP15Q53QZ3 475 aa14.91□□□□□ -0.02
TCOF1-202ENST00000377797 TTMPQ5BVD1 217 aa14.91□□□□□ -0.02
TCOF1-202ENST00000377797 CES3Q6UWW8 571 aa14.91□□□□□ -0.02
TCOF1-202ENST00000377797 DDX53Q86TM3 631 aaKnown RBP14.91□□□□□ -0.02
TCOF1-202ENST00000377797 RASAL3Q86YV0 1011 aa14.91□□□□□ -0.02
TCOF1-202ENST00000377797 FAXDC2Q96IV6 333 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms