RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 NPTXRO95502 500 aa26.1■■□□□ 1.77
C9orf40-201ENST00000376854 ALDH18A1P54886 795 aaKnown RBP26.1■■□□□ 1.77
C9orf40-201ENST00000376854 KDSRQ06136 332 aa26.1■■□□□ 1.77
C9orf40-201ENST00000376854 SOWAHAQ2M3V2 549 aa26.1■■□□□ 1.77
C9orf40-201ENST00000376854 CASC4Q6P4E1 433 aa26.1■■□□□ 1.77
C9orf40-201ENST00000376854 UNC5BQ8IZJ1 945 aa26.1■■□□□ 1.77
C9orf40-201ENST00000376854 PPP1R14CQ8TAE6 165 aa26.1■■□□□ 1.77
C9orf40-201ENST00000376854 THAP1Q9NVV9 213 aa26.1■■□□□ 1.77
C9orf40-201ENST00000376854 LCP1P13796 627 aa26.09■■□□□ 1.77
C9orf40-201ENST00000376854 AMPD1P23109 780 aa26.09■■□□□ 1.77
C9orf40-201ENST00000376854 MRPS35P82673 323 aaKnown RBP26.09■■□□□ 1.77
C9orf40-201ENST00000376854 KYAT3Q6YP21 454 aaKnown RBP26.09■■□□□ 1.77
C9orf40-201ENST00000376854 CYS1Q717R9 158 aa26.09■■□□□ 1.77
C9orf40-201ENST00000376854 FASTKD5Q7L8L6 764 aaKnown RBP26.09■■□□□ 1.77
C9orf40-201ENST00000376854 TFB1MQ8WVM0 346 aaKnown RBP26.09■■□□□ 1.77
C9orf40-201ENST00000376854 HTR3CQ8WXA8 447 aa26.09■■□□□ 1.77
C9orf40-201ENST00000376854 SNTG2Q9NY99 539 aa26.09■■□□□ 1.77
C9orf40-201ENST00000376854 TUBGCP4Q9UGJ1 667 aa26.09■■□□□ 1.77
C9orf40-201ENST00000376854 SPECC1L-ADORA2AF8WAN1 911 aa26.09■■□□□ 1.77
C9orf40-201ENST00000376854 HCRTO43612 131 aa26.09■■□□□ 1.77
C9orf40-201ENST00000376854 ADORA2BP29275 332 aa26.09■■□□□ 1.77
C9orf40-201ENST00000376854 STEAP4Q687X5 459 aa26.09■■□□□ 1.77
C9orf40-201ENST00000376854 ARHGAP17Q68EM7 881 aa26.09■■□□□ 1.77
C9orf40-201ENST00000376854 RFX8Q6ZV50 586 aa26.09■■□□□ 1.77
C9orf40-201ENST00000376854 SCG3Q8WXD2 468 aaKnown RBP26.09■■□□□ 1.77
C9orf40-201ENST00000376854 CCDC106Q9BWC9 280 aa26.09■■□□□ 1.77
C9orf40-201ENST00000376854 CCDC130P13994 396 aa26.08■■□□□ 1.77
C9orf40-201ENST00000376854 VAV1P15498 845 aa26.08■■□□□ 1.77
C9orf40-201ENST00000376854 ADORA2AP29274 412 aa26.08■■□□□ 1.77
C9orf40-201ENST00000376854 CRADDP78560 199 aa26.08■■□□□ 1.77
C9orf40-201ENST00000376854 WASHC5Q12768 1159 aa26.08■■□□□ 1.77
C9orf40-201ENST00000376854 FASTKD1Q53R41 847 aaKnown RBP26.08■■□□□ 1.77
C9orf40-201ENST00000376854 UNC93AQ86WB7 457 aa26.08■■□□□ 1.77
C9orf40-201ENST00000376854 PLEKHA5Q9HAU0 1116 aa26.08■■□□□ 1.77
C9orf40-201ENST00000376854 SLC17A6Q9P2U8 582 aa26.08■■□□□ 1.77
C9orf40-201ENST00000376854 MORF4L1Q9UBU8 362 aa26.08■■□□□ 1.77
C9orf40-201ENST00000376854 GTF2IRD1Q9UHL9 959 aa26.08■■□□□ 1.77
C9orf40-201ENST00000376854 COL1A2P08123 1366 aa26.08■■□□□ 1.77
C9orf40-201ENST00000376854 A0A0A0MRY4 1105 aa26.08■■□□□ 1.76
C9orf40-201ENST00000376854 ALDH1A2O94788 518 aa26.08■■□□□ 1.76
C9orf40-201ENST00000376854 ATP5BP06576 529 aaKnown RBP26.08■■□□□ 1.76
C9orf40-201ENST00000376854 GOT1P17174 413 aa26.08■■□□□ 1.76
C9orf40-201ENST00000376854 KLC1Q07866 573 aa26.08■■□□□ 1.76
C9orf40-201ENST00000376854 BST2Q10589 180 aaKnown RBP26.08■■□□□ 1.76
C9orf40-201ENST00000376854 DCAF4L1Q3SXM0 396 aa26.08■■□□□ 1.76
C9orf40-201ENST00000376854 MARK2Q7KZI7 788 aaKnown RBP26.08■■□□□ 1.76
C9orf40-201ENST00000376854 PYROXD2Q8N2H3 581 aa26.08■■□□□ 1.76
C9orf40-201ENST00000376854 PPTC7Q8NI37 304 aa26.08■■□□□ 1.76
C9orf40-201ENST00000376854 C18orf25Q96B23 403 aaPredicted RBP26.08■■□□□ 1.76
C9orf40-201ENST00000376854 SPATA13Q96N96 652 aa26.08■■□□□ 1.76
C9orf40-201ENST00000376854 EBF4Q9BQW3 602 aa26.08■■□□□ 1.76
C9orf40-201ENST00000376854 DERAQ9Y315 318 aa26.08■■□□□ 1.76
C9orf40-201ENST00000376854 DGKIO75912 1065 aa26.07■■□□□ 1.76
C9orf40-201ENST00000376854 SERPINA6P08185 405 aa26.07■■□□□ 1.76
C9orf40-201ENST00000376854 FDFT1P37268 417 aa26.07■■□□□ 1.76
C9orf40-201ENST00000376854 ADCYAP1R1P41586 468 aa26.07■■□□□ 1.76
C9orf40-201ENST00000376854 TBCCQ15814 346 aa26.07■■□□□ 1.76
C9orf40-201ENST00000376854 C16orf46Q6P387 395 aa26.07■■□□□ 1.76
C9orf40-201ENST00000376854 SCUBE1Q8IWY4 988 aa26.07■■□□□ 1.76
C9orf40-201ENST00000376854 LGMNQ99538 433 aa26.07■■□□□ 1.76
C9orf40-201ENST00000376854 C16orf70Q9BSU1 422 aa26.07■■□□□ 1.76
C9orf40-201ENST00000376854 PLA2G4CQ9UP65 541 aa26.07■■□□□ 1.76
C9orf40-201ENST00000376854 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.06■■□□□ 1.76
C9orf40-201ENST00000376854 DCAF8L1A6NGE4 600 aa26.06■■□□□ 1.76
C9orf40-201ENST00000376854 SDR42E2A6NKP2 422 aa26.06■■□□□ 1.76
C9orf40-201ENST00000376854 LINGO3P0C6S8 592 aa26.06■■□□□ 1.76
C9orf40-201ENST00000376854 MLNP12872 115 aa26.06■■□□□ 1.76
C9orf40-201ENST00000376854 ANKRD52Q8NB46 1076 aa26.06■■□□□ 1.76
C9orf40-201ENST00000376854 SNX27Q96L92 541 aa26.06■■□□□ 1.76
C9orf40-201ENST00000376854 OLFM3Q96PB7 478 aa26.06■■□□□ 1.76
C9orf40-201ENST00000376854 USP3Q9Y6I4 520 aa26.06■■□□□ 1.76
C9orf40-201ENST00000376854 PRR5-ARHGAP8B1AHC4 643 aa26.06■■□□□ 1.76
C9orf40-201ENST00000376854 GSRP00390 522 aa26.06■■□□□ 1.76
C9orf40-201ENST00000376854 ALDOAP04075 364 aaKnown RBP26.06■■□□□ 1.76
C9orf40-201ENST00000376854 PDGFRBP09619 1106 aa26.06■■□□□ 1.76
C9orf40-201ENST00000376854 BCAT1P54687 386 aa26.06■■□□□ 1.76
C9orf40-201ENST00000376854 ARHGAP8P85298 464 aa26.06■■□□□ 1.76
C9orf40-201ENST00000376854 NIPAL4Q0D2K0 466 aa26.06■■□□□ 1.76
C9orf40-201ENST00000376854 AP1B1Q10567 949 aa26.06■■□□□ 1.76
C9orf40-201ENST00000376854 ZRSR2Q15696 482 aaKnown RBP26.06■■□□□ 1.76
C9orf40-201ENST00000376854 DBN1Q16643 649 aa26.06■■□□□ 1.76
C9orf40-201ENST00000376854 GLRA4Q5JXX5 417 aa26.06■■□□□ 1.76
C9orf40-201ENST00000376854 STXBP5Q5T5C0 1151 aa26.06■■□□□ 1.76
C9orf40-201ENST00000376854 LRRC52Q8N7C0 313 aa26.06■■□□□ 1.76
C9orf40-201ENST00000376854 COLGALT1Q8NBJ5 622 aa26.06■■□□□ 1.76
C9orf40-201ENST00000376854 BEST2Q8NFU1 509 aa26.06■■□□□ 1.76
C9orf40-201ENST00000376854 ACMSDQ8TDX5 336 aa26.06■■□□□ 1.76
C9orf40-201ENST00000376854 CDKL2Q92772 493 aa26.06■■□□□ 1.76
C9orf40-201ENST00000376854 FAM136AQ96C01 138 aa26.06■■□□□ 1.76
C9orf40-201ENST00000376854 PIH1D1Q9NWS0 290 aaKnown RBP26.06■■□□□ 1.76
C9orf40-201ENST00000376854 ZNF212Q9UDV6 495 aa26.06■■□□□ 1.76
C9orf40-201ENST00000376854 LRCH1Q9Y2L9 728 aa26.06■■□□□ 1.76
C9orf40-201ENST00000376854 SCN1AP35498 2009 aa26.05■■□□□ 1.76
C9orf40-201ENST00000376854 DPPA5A6NC42 116 aa26.05■■□□□ 1.76
C9orf40-201ENST00000376854 HACD1B0YJ81 288 aa26.05■■□□□ 1.76
C9orf40-201ENST00000376854 F8W8V4 182 aa26.05■■□□□ 1.76
C9orf40-201ENST00000376854 TM7SF2O76062 418 aa26.05■■□□□ 1.76
C9orf40-201ENST00000376854 ARL4AP40617 200 aa26.05■■□□□ 1.76
C9orf40-201ENST00000376854 SESN2P58004 480 aaPredicted RBP26.05■■□□□ 1.76
C9orf40-201ENST00000376854 UBAP2LQ14157 1087 aaKnown RBP26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms