RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 TAC4Q86UU9 113 aa17.38■□□□□ 0.37
HLA-A-202ENST00000376806 TFB1MQ8WVM0 346 aaKnown RBP17.38■□□□□ 0.37
HLA-A-202ENST00000376806 TRIM62Q9BVG3 475 aa17.38■□□□□ 0.37
HLA-A-202ENST00000376806 ZCWPW1Q9H0M4 648 aa17.38■□□□□ 0.37
HLA-A-202ENST00000376806 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.38■□□□□ 0.37
HLA-A-202ENST00000376806 KIAA0100Q14667 2235 aaKnown RBP17.38■□□□□ 0.37
HLA-A-202ENST00000376806 ENPP3O14638 875 aa17.37■□□□□ 0.37
HLA-A-202ENST00000376806 DCLK1O15075 740 aa17.37■□□□□ 0.37
HLA-A-202ENST00000376806 TRAPPC3O43617 180 aa17.37■□□□□ 0.37
HLA-A-202ENST00000376806 AMHP03971 560 aa17.37■□□□□ 0.37
HLA-A-202ENST00000376806 PHBP35232 272 aa17.37■□□□□ 0.37
HLA-A-202ENST00000376806 SLC5A3P53794 718 aa17.37■□□□□ 0.37
HLA-A-202ENST00000376806 HNRNPH2P55795 449 aaKnown RBP17.37■□□□□ 0.37
HLA-A-202ENST00000376806 PAFAH1B3Q15102 231 aaKnown RBP17.37■□□□□ 0.37
HLA-A-202ENST00000376806 ARL13BQ3SXY8 428 aa17.37■□□□□ 0.37
HLA-A-202ENST00000376806 SYCP2LQ5T4T6 812 aa17.37■□□□□ 0.37
HLA-A-202ENST00000376806 TDRPQ86YL5 185 aa17.37■□□□□ 0.37
HLA-A-202ENST00000376806 ABI1Q8IZP0 508 aa17.37■□□□□ 0.37
HLA-A-202ENST00000376806 CYP4X1Q8N118 509 aa17.37■□□□□ 0.37
HLA-A-202ENST00000376806 SCAMP5Q8TAC9 235 aa17.37■□□□□ 0.37
HLA-A-202ENST00000376806 SEPT8Q92599 483 aa17.37■□□□□ 0.37
HLA-A-202ENST00000376806 CENPTQ96BT3 561 aa17.37■□□□□ 0.37
HLA-A-202ENST00000376806 FRMD8Q9BZ67 464 aaPredicted RBP17.37■□□□□ 0.37
HLA-A-202ENST00000376806 TBK1Q9UHD2 729 aa17.37■□□□□ 0.37
HLA-A-202ENST00000376806 OGDHLQ9ULD0 1010 aa17.37■□□□□ 0.37
HLA-A-202ENST00000376806 SHROOM3Q8TF72 1996 aa17.37■□□□□ 0.37
HLA-A-202ENST00000376806 C5orf60A6NFR6 353 aa17.37■□□□□ 0.37
HLA-A-202ENST00000376806 FAM72CH0Y354 149 aa17.37■□□□□ 0.37
HLA-A-202ENST00000376806 TSHRP16473 764 aa17.37■□□□□ 0.37
HLA-A-202ENST00000376806 GRIK1P39086 918 aa17.37■□□□□ 0.37
HLA-A-202ENST00000376806 CXCR3P49682 368 aa17.37■□□□□ 0.37
HLA-A-202ENST00000376806 TPI1P60174 286 aa17.37■□□□□ 0.37
HLA-A-202ENST00000376806 MTM1Q13496 603 aa17.37■□□□□ 0.37
HLA-A-202ENST00000376806 PRKD1Q15139 912 aaPredicted RBP17.37■□□□□ 0.37
HLA-A-202ENST00000376806 TMED2Q15363 201 aa17.37■□□□□ 0.37
HLA-A-202ENST00000376806 FAM72AQ5TYM5 149 aa17.37■□□□□ 0.37
HLA-A-202ENST00000376806 FAM72DQ6L9T8 149 aa17.37■□□□□ 0.37
HLA-A-202ENST00000376806 BEND5Q7L4P6 421 aa17.37■□□□□ 0.37
HLA-A-202ENST00000376806 FAM72BQ86X60 149 aa17.37■□□□□ 0.37
HLA-A-202ENST00000376806 DCP1BQ8IZD4 617 aaKnown RBP17.37■□□□□ 0.37
HLA-A-202ENST00000376806 DQX1Q8TE96 717 aaKnown RBP17.37■□□□□ 0.37
HLA-A-202ENST00000376806 HTR3CQ8WXA8 447 aa17.37■□□□□ 0.37
HLA-A-202ENST00000376806 COLEC11Q9BWP8 271 aa17.37■□□□□ 0.37
HLA-A-202ENST00000376806 PPCSQ9HAB8 311 aa17.37■□□□□ 0.37
HLA-A-202ENST00000376806 ETNK1Q9HBU6 452 aa17.37■□□□□ 0.37
HLA-A-202ENST00000376806 PPANQ9NQ55 473 aaKnown RBP17.37■□□□□ 0.37
HLA-A-202ENST00000376806 PCDHB7Q9Y5E2 793 aa17.37■□□□□ 0.37
HLA-A-202ENST00000376806 MYO18AQ92614 2054 aaKnown RBP17.37■□□□□ 0.37
HLA-A-202ENST00000376806 NDUFAB1O14561 156 aa17.36■□□□□ 0.37
HLA-A-202ENST00000376806 TNFRSF10BO14763 440 aa17.36■□□□□ 0.37
HLA-A-202ENST00000376806 SYN3O14994 580 aa17.36■□□□□ 0.37
HLA-A-202ENST00000376806 TADA2AO75478 443 aa17.36■□□□□ 0.37
HLA-A-202ENST00000376806 SSTR1P30872 391 aa17.36■□□□□ 0.37
HLA-A-202ENST00000376806 GATMP50440 423 aa17.36■□□□□ 0.37
HLA-A-202ENST00000376806 SEC24CP53992 1094 aa17.36■□□□□ 0.37
HLA-A-202ENST00000376806 IFRD2Q12894 506 aaPredicted RBP17.36■□□□□ 0.37
HLA-A-202ENST00000376806 CBLBQ13191 982 aa17.36■□□□□ 0.37
HLA-A-202ENST00000376806 TCTN1Q2MV58 587 aa17.36■□□□□ 0.37
HLA-A-202ENST00000376806 NLRP14Q86W24 1093 aa17.36■□□□□ 0.37
HLA-A-202ENST00000376806 VPS52Q8N1B4 723 aa17.36■□□□□ 0.37
HLA-A-202ENST00000376806 ATXN2LQ8WWM7 1075 aaKnown RBP17.36■□□□□ 0.37
HLA-A-202ENST00000376806 APBB2Q92870 758 aa17.36■□□□□ 0.37
HLA-A-202ENST00000376806 CASD1Q96PB1 797 aa17.36■□□□□ 0.37
HLA-A-202ENST00000376806 XPO6Q96QU8 1125 aaKnown RBP17.36■□□□□ 0.37
HLA-A-202ENST00000376806 LGMNQ99538 433 aa17.36■□□□□ 0.37
HLA-A-202ENST00000376806 CRISPLD2Q9H0B8 497 aa17.36■□□□□ 0.37
HLA-A-202ENST00000376806 ABI2Q9NYB9 513 aaPredicted RBP17.36■□□□□ 0.37
HLA-A-202ENST00000376806 ADAM28Q9UKQ2 775 aa17.36■□□□□ 0.37
HLA-A-202ENST00000376806 CHMP2BQ9UQN3 213 aa17.36■□□□□ 0.37
HLA-A-202ENST00000376806 GREB1Q4ZG55 1949 aa17.36■□□□□ 0.37
HLA-A-202ENST00000376806 POC1B-GALNT4F8VUJ3 575 aa17.35■□□□□ 0.37
HLA-A-202ENST00000376806 IGLV3-25P01717 112 aa17.35■□□□□ 0.37
HLA-A-202ENST00000376806 ELK3P41970 407 aa17.35■□□□□ 0.37
HLA-A-202ENST00000376806 HCAR3P49019 387 aa17.35■□□□□ 0.37
HLA-A-202ENST00000376806 MNX1P50219 401 aaPredicted RBP17.35■□□□□ 0.37
HLA-A-202ENST00000376806 YWHAGP61981 247 aaKnown RBP eCLIP17.35■□□□□ 0.37
HLA-A-202ENST00000376806 PDK1Q15118 436 aa17.35■□□□□ 0.37
HLA-A-202ENST00000376806 VARS2Q5ST30 1063 aaKnown RBP17.35■□□□□ 0.37
HLA-A-202ENST00000376806 VSTM1Q6UX27 236 aa17.35■□□□□ 0.37
HLA-A-202ENST00000376806 ARHGEF18Q6ZSZ5 1173 aa17.35■□□□□ 0.37
HLA-A-202ENST00000376806 WDCPQ9H6R7 721 aa17.35■□□□□ 0.37
HLA-A-202ENST00000376806 SLC24A2Q9UI40 661 aa17.35■□□□□ 0.37
HLA-A-202ENST00000376806 RABGEF1Q9UJ41 708 aa17.35■□□□□ 0.37
HLA-A-202ENST00000376806 A0A0A0MRY4 1105 aa17.35■□□□□ 0.37
HLA-A-202ENST00000376806 FOXO6A8MYZ6 492 aa17.35■□□□□ 0.37
HLA-A-202ENST00000376806 PPP1R12AO14974 1030 aaPredicted RBP17.35■□□□□ 0.37
HLA-A-202ENST00000376806 PQBP1O60828 265 aaKnown RBP17.35■□□□□ 0.37
HLA-A-202ENST00000376806 METTL18O95568 372 aa17.35■□□□□ 0.37
HLA-A-202ENST00000376806 APRTP07741 180 aa17.35■□□□□ 0.37
HLA-A-202ENST00000376806 CREB1P16220 341 aa17.35■□□□□ 0.37
HLA-A-202ENST00000376806 ERCC2P18074 760 aa17.35■□□□□ 0.37
HLA-A-202ENST00000376806 TPSB2P20231 275 aa17.35■□□□□ 0.37
HLA-A-202ENST00000376806 GLUD2P49448 558 aa17.35■□□□□ 0.37
HLA-A-202ENST00000376806 ZNF135P52742 658 aaPredicted RBP17.35■□□□□ 0.37
HLA-A-202ENST00000376806 TPSAB1Q15661 275 aa17.35■□□□□ 0.37
HLA-A-202ENST00000376806 NFE2Q16621 373 aaPredicted RBP17.35■□□□□ 0.37
HLA-A-202ENST00000376806 TADA2BQ86TJ2 420 aa17.35■□□□□ 0.37
HLA-A-202ENST00000376806 SCN4BQ8IWT1 228 aa17.35■□□□□ 0.37
HLA-A-202ENST00000376806 PALM2Q8IXS6 379 aa17.35■□□□□ 0.37
HLA-A-202ENST00000376806 NETO2Q8NC67 525 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms