RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 STARD13Q9Y3M8 1113 aa20.89■□□□□ 0.94
VSX1-202ENST00000376709 STK10O94804 968 aaKnown RBP20.89■□□□□ 0.93
VSX1-202ENST00000376709 VAV1P15498 845 aa20.89■□□□□ 0.93
VSX1-202ENST00000376709 ADRA1DP25100 572 aa20.89■□□□□ 0.93
VSX1-202ENST00000376709 FAAP100Q0VG06 881 aa20.89■□□□□ 0.93
VSX1-202ENST00000376709 AP1B1Q10567 949 aa20.89■□□□□ 0.93
VSX1-202ENST00000376709 ANKRD20A2Q5SQ80 823 aa20.89■□□□□ 0.93
VSX1-202ENST00000376709 ANKRD20A1Q5TYW2 823 aa20.89■□□□□ 0.93
VSX1-202ENST00000376709 ANKRD20A3Q5VUR7 823 aa20.89■□□□□ 0.93
VSX1-202ENST00000376709 BNIPLQ7Z465 357 aa20.89■□□□□ 0.93
VSX1-202ENST00000376709 SLC26A11Q86WA9 606 aa20.89■□□□□ 0.93
VSX1-202ENST00000376709 LRRC6Q86X45 466 aa20.89■□□□□ 0.93
VSX1-202ENST00000376709 GBP7Q8N8V2 638 aaPredicted RBP20.89■□□□□ 0.93
VSX1-202ENST00000376709 SMOQ99835 787 aa20.89■□□□□ 0.93
VSX1-202ENST00000376709 FERMT1Q9BQL6 677 aa20.89■□□□□ 0.93
VSX1-202ENST00000376709 PAAF1Q9BRP4 392 aa20.89■□□□□ 0.93
VSX1-202ENST00000376709 XAB2Q9HCS7 855 aaKnown RBP20.89■□□□□ 0.93
VSX1-202ENST00000376709 SLCO1B3Q9NPD5 702 aa20.89■□□□□ 0.93
VSX1-202ENST00000376709 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.89■□□□□ 0.93
VSX1-202ENST00000376709 MYO18AQ92614 2054 aaKnown RBP20.88■□□□□ 0.93
VSX1-202ENST00000376709 A0A0A0MRY4 1105 aa20.88■□□□□ 0.93
VSX1-202ENST00000376709 YJEFN3A6XGL0 299 aa20.88■□□□□ 0.93
VSX1-202ENST00000376709 E7ENQ6 273 aa20.88■□□□□ 0.93
VSX1-202ENST00000376709 RASSF9O75901 435 aa20.88■□□□□ 0.93
VSX1-202ENST00000376709 UBOX5O94941 541 aa20.88■□□□□ 0.93
VSX1-202ENST00000376709 RPL9P32969 192 aaKnown RBP20.88■□□□□ 0.93
VSX1-202ENST00000376709 DAOAP59103 153 aa20.88■□□□□ 0.93
VSX1-202ENST00000376709 NKX3-2P78367 333 aa20.88■□□□□ 0.93
VSX1-202ENST00000376709 SARNPP82979 210 aaKnown RBP20.88■□□□□ 0.93
VSX1-202ENST00000376709 SEMA5AQ13591 1074 aa20.88■□□□□ 0.93
VSX1-202ENST00000376709 ADAM32Q8TC27 787 aa20.88■□□□□ 0.93
VSX1-202ENST00000376709 SPATA13Q96N96 652 aa20.88■□□□□ 0.93
VSX1-202ENST00000376709 CNGB3Q9NQW8 809 aa20.88■□□□□ 0.93
VSX1-202ENST00000376709 CDH9Q9ULB4 789 aa20.88■□□□□ 0.93
VSX1-202ENST00000376709 TSC2P49815 1807 aa20.88■□□□□ 0.93
VSX1-202ENST00000376709 EEF2KO00418 725 aaKnown RBP20.87■□□□□ 0.93
VSX1-202ENST00000376709 TRDMT1O14717 391 aaKnown RBP20.87■□□□□ 0.93
VSX1-202ENST00000376709 LPXNO60711 386 aa20.87■□□□□ 0.93
VSX1-202ENST00000376709 DNAJC8O75937 253 aaPredicted RBP20.87■□□□□ 0.93
VSX1-202ENST00000376709 USP17L7P0C7H9 530 aa20.87■□□□□ 0.93
VSX1-202ENST00000376709 MAGEA3P43357 314 aa20.87■□□□□ 0.93
VSX1-202ENST00000376709 UPP1Q16831 310 aa20.87■□□□□ 0.93
VSX1-202ENST00000376709 ZNF534Q76KX8 674 aa20.87■□□□□ 0.93
VSX1-202ENST00000376709 GPRIN1Q7Z2K8 1008 aa20.87■□□□□ 0.93
VSX1-202ENST00000376709 NETO2Q8NC67 525 aa20.87■□□□□ 0.93
VSX1-202ENST00000376709 CCNYQ8ND76 341 aa20.87■□□□□ 0.93
VSX1-202ENST00000376709 F5H423 210 aaPredicted RBP20.87■□□□□ 0.93
VSX1-202ENST00000376709 APOEP02649 317 aa20.87■□□□□ 0.93
VSX1-202ENST00000376709 RPLP2P05387 115 aaKnown RBP20.87■□□□□ 0.93
VSX1-202ENST00000376709 NCAM1P13591 858 aa20.87■□□□□ 0.93
VSX1-202ENST00000376709 PCSK1P29120 753 aa20.87■□□□□ 0.93
VSX1-202ENST00000376709 CD52P31358 61 aa20.87■□□□□ 0.93
VSX1-202ENST00000376709 CACNA2D1P54289 1103 aa20.87■□□□□ 0.93
VSX1-202ENST00000376709 UNC5AQ6ZN44 842 aa20.87■□□□□ 0.93
VSX1-202ENST00000376709 SMC1BQ8NDV3 1235 aa20.87■□□□□ 0.93
VSX1-202ENST00000376709 KLHDC9Q8NEP7 349 aa20.87■□□□□ 0.93
VSX1-202ENST00000376709 THOC1Q96FV9 657 aaKnown RBP20.87■□□□□ 0.93
VSX1-202ENST00000376709 SMARCD1Q96GM5 515 aa20.87■□□□□ 0.93
VSX1-202ENST00000376709 SERAC1Q96JX3 654 aa20.87■□□□□ 0.93
VSX1-202ENST00000376709 RMDN2Q96LZ7 410 aa20.87■□□□□ 0.93
VSX1-202ENST00000376709 GPBP1L1Q9HC44 474 aaPredicted RBP20.87■□□□□ 0.93
VSX1-202ENST00000376709 SEPT10Q9P0V9 454 aa20.87■□□□□ 0.93
VSX1-202ENST00000376709 PADI3Q9ULW8 664 aa20.87■□□□□ 0.93
VSX1-202ENST00000376709 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.87■□□□□ 0.93
VSX1-202ENST00000376709 PTCH2Q9Y6C5 1203 aa20.87■□□□□ 0.93
VSX1-202ENST00000376709 WDR91A4D1P6 747 aa20.86■□□□□ 0.93
VSX1-202ENST00000376709 RNF103O00237 685 aa20.86■□□□□ 0.93
VSX1-202ENST00000376709 FYNP06241 537 aa20.86■□□□□ 0.93
VSX1-202ENST00000376709 FDFT1P37268 417 aa20.86■□□□□ 0.93
VSX1-202ENST00000376709 PDK1Q15118 436 aa20.86■□□□□ 0.93
VSX1-202ENST00000376709 PAN2Q504Q3 1202 aaKnown RBP20.86■□□□□ 0.93
VSX1-202ENST00000376709 TIGD5Q53EQ6 642 aa20.86■□□□□ 0.93
VSX1-202ENST00000376709 TTC39BQ5VTQ0 682 aaPredicted RBP20.86■□□□□ 0.93
VSX1-202ENST00000376709 RNF43Q68DV7 783 aa20.86■□□□□ 0.93
VSX1-202ENST00000376709 RFX8Q6ZV50 586 aa20.86■□□□□ 0.93
VSX1-202ENST00000376709 COLGALT1Q8NBJ5 622 aa20.86■□□□□ 0.93
VSX1-202ENST00000376709 ZMIZ2Q8NF64 920 aa20.86■□□□□ 0.93
VSX1-202ENST00000376709 ZNF75CPQ92670 426 aaPredicted RBP20.86■□□□□ 0.93
VSX1-202ENST00000376709 EBNA1BP2Q99848 306 aaKnown RBP20.86■□□□□ 0.93
VSX1-202ENST00000376709 C12orf65Q9H3J6 166 aaKnown RBP20.86■□□□□ 0.93
VSX1-202ENST00000376709 RXFP1Q9HBX9 757 aa20.86■□□□□ 0.93
VSX1-202ENST00000376709 TMEM30AQ9NV96 361 aa20.86■□□□□ 0.93
VSX1-202ENST00000376709 SLC17A7Q9P2U7 560 aa20.86■□□□□ 0.93
VSX1-202ENST00000376709 I3L4J1 428 aa20.86■□□□□ 0.93
VSX1-202ENST00000376709 HGSO14964 777 aaPredicted RBP20.86■□□□□ 0.93
VSX1-202ENST00000376709 PPP1R12AO14974 1030 aaPredicted RBP20.86■□□□□ 0.93
VSX1-202ENST00000376709 EDF1O60869 148 aaKnown RBP20.86■□□□□ 0.93
VSX1-202ENST00000376709 FAM155BO75949 473 aa20.86■□□□□ 0.93
VSX1-202ENST00000376709 KRT37O76014 449 aa20.86■□□□□ 0.93
VSX1-202ENST00000376709 POMCP01189 267 aa20.86■□□□□ 0.93
VSX1-202ENST00000376709 GSTA2P09210 222 aa20.86■□□□□ 0.93
VSX1-202ENST00000376709 PYGBP11216 843 aa20.86■□□□□ 0.93
VSX1-202ENST00000376709 ODC1P11926 461 aa20.86■□□□□ 0.93
VSX1-202ENST00000376709 PRKCHP24723 683 aa20.86■□□□□ 0.93
VSX1-202ENST00000376709 GRIA1P42261 906 aa20.86■□□□□ 0.93
VSX1-202ENST00000376709 SP3Q02447 781 aa20.86■□□□□ 0.93
VSX1-202ENST00000376709 CCSAPQ6IQ19 270 aaPredicted RBP20.86■□□□□ 0.93
VSX1-202ENST00000376709 GSDMBQ8TAX9 411 aa20.86■□□□□ 0.93
VSX1-202ENST00000376709 P2RY11Q96G91 374 aa20.86■□□□□ 0.93
VSX1-202ENST00000376709 APOPT1Q96IL0 206 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 188.5 ms