RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 R3HDM2Q9Y2K5 976 aaKnown RBP10.44□□□□□ -0.74
PTCH1-204ENST00000375290 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.44□□□□□ -0.74
PTCH1-204ENST00000375290 NMT1P30419 496 aaKnown RBP10.44□□□□□ -0.74
PTCH1-204ENST00000375290 OTUD4Q01804 1114 aaKnown RBP10.44□□□□□ -0.74
PTCH1-204ENST00000375290 AUHQ13825 339 aaKnown RBP10.44□□□□□ -0.74
PTCH1-204ENST00000375290 ZPBP2Q6X784 338 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 CD320Q9NPF0 282 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 FAM217BQ9NTX9 383 aaPredicted RBP10.44□□□□□ -0.74
PTCH1-204ENST00000375290 CCDC59Q9P031 241 aaKnown RBP10.44□□□□□ -0.74
PTCH1-204ENST00000375290 TMEM94Q12767 1356 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 DNAJB8Q8NHS0 232 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 PIGBQ92521 554 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 TOP1MTQ969P6 601 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 MAGED2Q9UNF1 606 aaPredicted RBP10.44□□□□□ -0.74
PTCH1-204ENST00000375290 SLC12A4Q9UP95 1085 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 DFFAO00273 331 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 ATP9BO43861 1147 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 TM7SF2O76062 418 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 HMGCRP04035 888 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 IDO1P14902 403 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 PDCD4Q53EL6 469 aaKnown RBP10.44□□□□□ -0.74
PTCH1-204ENST00000375290 ZNF618Q5T7W0 954 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 CHST13Q8NET6 341 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 ITFG2Q969R8 447 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 PRDM8Q9NQV8 689 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 LGALS13Q9UHV8 139 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 PTBP2Q9UKA9 531 aaKnown RBP10.44□□□□□ -0.74
PTCH1-204ENST00000375290 CCDC162PA2VCL2 907 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 EFCAB10A6NFE3 127 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 RRN3P2A6NIE6 340 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 RAD51BO15315 384 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 CD44P16070 742 aaKnown RBP10.44□□□□□ -0.74
PTCH1-204ENST00000375290 BMT2Q1RMZ1 405 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 CYP4A22Q5TCH4 519 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 TMEM26Q6ZUK4 368 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 RFX8Q6ZV50 586 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 STRA8Q7Z7C7 330 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 SLFN11Q7Z7L1 901 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 ZNF557Q8N988 423 aaPredicted RBP10.44□□□□□ -0.74
PTCH1-204ENST00000375290 SKA1Q96BD8 255 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 GPR75-ASB3A0A0A6YYF3 556 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 OPLAHO14841 1288 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 CYP19A1P11511 503 aaPredicted RBP10.44□□□□□ -0.74
PTCH1-204ENST00000375290 COL6A2P12110 1019 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 SWSAP1Q6NVH7 229 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 AKAP14Q86UN6 197 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 EMILIN2Q9BXX0 1053 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 CDH9Q9ULB4 789 aa10.44□□□□□ -0.74
PTCH1-204ENST00000375290 NID2Q14112 1375 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 CCDC182A6NF36 153 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 OGTO15294 1046 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 DNAJB5O75953 348 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 SLC25A27O95847 323 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 RPL21P46778 160 aaKnown RBP10.43□□□□□ -0.74
PTCH1-204ENST00000375290 SMIM11AP58511 58 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 TNFAIP8L3Q5GJ75 292 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 CLVS1Q8IUQ0 354 aaPredicted RBP10.43□□□□□ -0.74
PTCH1-204ENST00000375290 KSR1Q8IVT5 923 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 TMEM132CQ8N3T6 1108 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 WDR36Q8NI36 951 aaKnown RBP10.43□□□□□ -0.74
PTCH1-204ENST00000375290 ZFYVE19Q96K21 471 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 NUAK2Q9H093 628 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 RNF146Q9NTX7 359 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 SPATA31A3Q5VYP0 1347 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 MPZL2O60487 215 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 MLNP12872 115 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 GRK3P35626 688 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 LRRC74AQ0VAA2 488 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 PTP4A2Q12974 167 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 KRT33BQ14525 404 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 CYP51A1Q16850 503 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 SNRNP48Q6IEG0 339 aaKnown RBP10.43□□□□□ -0.74
PTCH1-204ENST00000375290 LDHDQ86WU2 507 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 SERHL2Q9H4I8 314 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 RIOX1Q9H6W3 641 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 SERHLQ9NQF3 203 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 LATS2Q9NRM7 1088 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 ADPRHL2Q9NX46 363 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 ASAP1Q9ULH1 1129 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 MYL12AP19105 171 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 RENBPP51606 427 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 GIT2Q14161 759 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 SEC23AQ15436 765 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 LIN52Q52LA3 116 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 PACRGLQ8N7B6 248 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 CDC26Q8NHZ8 85 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 ABHD8Q96I13 439 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 TUBGCP5Q96RT8 1024 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 YTHDF1Q9BYJ9 559 aaKnown RBP10.43□□□□□ -0.74
PTCH1-204ENST00000375290 ALG13Q9NP73 1137 aaKnown RBP10.43□□□□□ -0.74
PTCH1-204ENST00000375290 SUPT3HB4E1H0 165 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 SUPT7LO94864 414 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 PGK2P07205 417 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 NEK5Q6P3R8 708 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 C12orf50Q8NA57 414 aaPredicted RBP10.43□□□□□ -0.74
PTCH1-204ENST00000375290 OMA1Q96E52 524 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 WDR41Q9HAD4 459 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 NINJ2Q9NZG7 142 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 LNPEPQ9UIQ6 1025 aa10.43□□□□□ -0.74
PTCH1-204ENST00000375290 ZNF180Q9UJW8 692 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms