RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 FAM193AP78312 1265 aa5.22□□□□□ -1.57
USP48-202ENST00000374730 TMPRSS15P98073 1019 aa5.22□□□□□ -1.57
USP48-202ENST00000374730 LRRC63Q05C16 580 aa5.22□□□□□ -1.57
USP48-202ENST00000374730 GABPB1Q06547 395 aaPredicted RBP5.22□□□□□ -1.57
USP48-202ENST00000374730 STK4Q13043 487 aa5.22□□□□□ -1.57
USP48-202ENST00000374730 MEA1Q16626 185 aa5.22□□□□□ -1.57
USP48-202ENST00000374730 MUM1L1Q5H9M0 696 aa5.22□□□□□ -1.57
USP48-202ENST00000374730 DACT2Q5SW24 774 aa5.22□□□□□ -1.57
USP48-202ENST00000374730 FAM102AQ5T9C2 384 aaPredicted RBP5.22□□□□□ -1.57
USP48-202ENST00000374730 UTP14CQ5TAP6 766 aaKnown RBP5.22□□□□□ -1.57
USP48-202ENST00000374730 STRIP1Q5VSL9 837 aa5.22□□□□□ -1.57
USP48-202ENST00000374730 KRT79Q5XKE5 535 aa5.22□□□□□ -1.57
USP48-202ENST00000374730 METRNLQ641Q3 311 aa5.22□□□□□ -1.57
USP48-202ENST00000374730 CENPPQ6IPU0 288 aa5.22□□□□□ -1.57
USP48-202ENST00000374730 ARMC6Q6NXE6 501 aa5.22□□□□□ -1.57
USP48-202ENST00000374730 Q6YL49 198 aa5.22□□□□□ -1.57
USP48-202ENST00000374730 SPATS2Q86XZ4 545 aaKnown RBP5.22□□□□□ -1.57
USP48-202ENST00000374730 COL23A1Q86Y22 540 aaPredicted RBP5.22□□□□□ -1.57
USP48-202ENST00000374730 CMIPQ8IY22 773 aa5.22□□□□□ -1.57
USP48-202ENST00000374730 ADGRF4Q8IZF3 695 aa5.22□□□□□ -1.57
USP48-202ENST00000374730 GUF1Q8N442 669 aaKnown RBP5.22□□□□□ -1.57
USP48-202ENST00000374730 CSGALNACT2Q8N6G5 542 aa5.22□□□□□ -1.57
USP48-202ENST00000374730 RNF169Q8NCN4 708 aa5.22□□□□□ -1.57
USP48-202ENST00000374730 ACRBPQ8NEB7 543 aa5.22□□□□□ -1.57
USP48-202ENST00000374730 OR8K1Q8NGG5 319 aa5.22□□□□□ -1.57
USP48-202ENST00000374730 RAD54LQ92698 747 aa5.22□□□□□ -1.57
USP48-202ENST00000374730 GOLGA1Q92805 767 aa5.22□□□□□ -1.57
USP48-202ENST00000374730 HOXB13Q92826 284 aaPredicted RBP5.22□□□□□ -1.57
USP48-202ENST00000374730 COA7Q96BR5 231 aa5.22□□□□□ -1.57
USP48-202ENST00000374730 CDK5RAP3Q96JB5 506 aa5.22□□□□□ -1.57
USP48-202ENST00000374730 CNOT6LQ96LI5 555 aaKnown RBP5.22□□□□□ -1.57
USP48-202ENST00000374730 NUP88Q99567 741 aaPredicted RBP5.22□□□□□ -1.57
USP48-202ENST00000374730 TUBGCP2Q9BSJ2 902 aa5.22□□□□□ -1.57
USP48-202ENST00000374730 ACE2Q9BYF1 805 aaPredicted RBP5.22□□□□□ -1.57
USP48-202ENST00000374730 DNAJC18Q9H819 358 aa5.22□□□□□ -1.57
USP48-202ENST00000374730 VTA1Q9NP79 307 aa5.22□□□□□ -1.57
USP48-202ENST00000374730 TCEAL9Q9UHQ7 104 aa5.22□□□□□ -1.57
USP48-202ENST00000374730 CDC23Q9UJX2 597 aa5.22□□□□□ -1.57
USP48-202ENST00000374730 ATP8A1Q9Y2Q0 1164 aa5.22□□□□□ -1.57
USP48-202ENST00000374730 LUC7L2Q9Y383 392 aaKnown RBP5.22□□□□□ -1.57
USP48-202ENST00000374730 EPN1Q9Y6I3 576 aaPredicted RBP5.22□□□□□ -1.57
USP48-202ENST00000374730 CTAGE9A4FU28 777 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 MYMKA6NI61 221 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 GPR39O43194 453 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 LPXNO60711 386 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 ENTPD3O75355 529 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 PEX14O75381 377 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 NDUFA10O95299 355 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 MMP10P09238 476 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 FCER1AP12319 257 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 ADSLP30566 484 aaPredicted RBP5.21□□□□□ -1.58
USP48-202ENST00000374730 HNRNPH3P31942 346 aaKnown RBP5.21□□□□□ -1.58
USP48-202ENST00000374730 ADRA1BP35368 520 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 SREBF1P36956 1147 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 MTIF2P46199 727 aaKnown RBP5.21□□□□□ -1.58
USP48-202ENST00000374730 MMP14P50281 582 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 SLC5A3P53794 718 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 SCAND1P57086 179 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 CBX1P83916 185 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 ZBED6P86452 979 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 MALLQ13021 153 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 HLTFQ14527 1009 aaKnown RBP eCLIP5.21□□□□□ -1.58
USP48-202ENST00000374730 WHAMMP3Q1A5X7 153 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 CCDC96Q2M329 555 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 PDCD4Q53EL6 469 aaKnown RBP5.21□□□□□ -1.58
USP48-202ENST00000374730 ZNF569Q5MCW4 686 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 ATXN7L2Q5T6C5 722 aaPredicted RBP5.21□□□□□ -1.58
USP48-202ENST00000374730 HECTD2Q5U5R9 776 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 ANKRD40Q6AI12 368 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 TATDN1Q6P1N9 297 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 TMEM179Q6ZVK1 233 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 Q6ZVL8 140 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 SRGAP1Q7Z6B7 1085 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 CREBRFQ8IUR6 639 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 CCDC170Q8IYT3 715 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 KRT222Q8N1A0 295 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 SLC35F6Q8N357 371 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 CEP112Q8N8E3 955 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 GMCL1P1Q8NEA9 526 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 SLC35B2Q8TB61 432 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 CRYGNQ8WXF5 182 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 AHCYL2Q96HN2 611 aaKnown RBP5.21□□□□□ -1.58
USP48-202ENST00000374730 PLIN2Q99541 437 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 NAPGQ99747 312 aaPredicted RBP5.21□□□□□ -1.58
USP48-202ENST00000374730 MXD3Q9BW11 206 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 EDEM3Q9BZQ6 932 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 NT5C3AQ9H0P0 336 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 SERHL2Q9H4I8 314 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 HAUS4Q9H6D7 363 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 CYP4F11Q9HBI6 524 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 KCNMB3Q9NPA1 279 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 C14orf119Q9NWQ9 140 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 ZNF446Q9NWS9 450 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 PI4KBQ9UBF8 816 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 DDX25Q9UHL0 483 aaKnown RBP5.21□□□□□ -1.58
USP48-202ENST00000374730 ZBTB21Q9ULJ3 1066 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 MYH10P35580 1976 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 COL4A3Q01955 1670 aa5.21□□□□□ -1.58
USP48-202ENST00000374730 MYH11P35749 1972 aa5.2□□□□□ -1.58
USP48-202ENST00000374730 SMCHD1A6NHR9 2005 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms