RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 CALCOCO1Q9P1Z2 691 aa11.81□□□□□ -0.52
HSPG2-202ENST00000374676 UVRAGQ9P2Y5 699 aa11.81□□□□□ -0.52
HSPG2-202ENST00000374676 SLC12A6Q9UHW9 1150 aa11.81□□□□□ -0.52
HSPG2-202ENST00000374676 PCDHA13Q9Y5I0 950 aa11.81□□□□□ -0.52
HSPG2-202ENST00000374676 COL4A2P08572 1712 aa11.8□□□□□ -0.52
HSPG2-202ENST00000374676 SYNJ2BP-COX16A0A087WUM0 186 aa11.8□□□□□ -0.52
HSPG2-202ENST00000374676 GFRA2O00451 464 aa11.8□□□□□ -0.52
HSPG2-202ENST00000374676 CCP110O43303 1012 aa11.8□□□□□ -0.52
HSPG2-202ENST00000374676 IPO7O95373 1038 aaKnown RBP11.8□□□□□ -0.52
HSPG2-202ENST00000374676 ARSAP15289 507 aa11.8□□□□□ -0.52
HSPG2-202ENST00000374676 DESP17661 470 aa11.8□□□□□ -0.52
HSPG2-202ENST00000374676 RDXP35241 583 aaKnown RBP11.8□□□□□ -0.52
HSPG2-202ENST00000374676 SLC11A2P49281 568 aa11.8□□□□□ -0.52
HSPG2-202ENST00000374676 ATP11AP98196 1134 aa11.8□□□□□ -0.52
HSPG2-202ENST00000374676 OGDHQ02218 1023 aa11.8□□□□□ -0.52
HSPG2-202ENST00000374676 TNK2Q07912 1038 aa11.8□□□□□ -0.52
HSPG2-202ENST00000374676 NME3Q13232 169 aa11.8□□□□□ -0.52
HSPG2-202ENST00000374676 ACAP1Q15027 740 aa11.8□□□□□ -0.52
HSPG2-202ENST00000374676 DHCR24Q15392 516 aa11.8□□□□□ -0.52
HSPG2-202ENST00000374676 C15orf59Q2T9L4 293 aaPredicted RBP11.8□□□□□ -0.52
HSPG2-202ENST00000374676 SLC44A4Q53GD3 710 aa11.8□□□□□ -0.52
HSPG2-202ENST00000374676 TRIM68Q6AZZ1 485 aa11.8□□□□□ -0.52
HSPG2-202ENST00000374676 LRRC8AQ8IWT6 810 aa11.8□□□□□ -0.52
HSPG2-202ENST00000374676 CPA6Q8N4T0 437 aa11.8□□□□□ -0.52
HSPG2-202ENST00000374676 FAM172AQ8WUF8 416 aa11.8□□□□□ -0.52
HSPG2-202ENST00000374676 RNF34Q969K3 372 aa11.8□□□□□ -0.52
HSPG2-202ENST00000374676 NCAPGQ9BPX3 1015 aa11.8□□□□□ -0.52
HSPG2-202ENST00000374676 COL25A1Q9BXS0 654 aaPredicted RBP11.8□□□□□ -0.52
HSPG2-202ENST00000374676 WDCPQ9H6R7 721 aa11.8□□□□□ -0.52
HSPG2-202ENST00000374676 C8orf33Q9H7E9 229 aaPredicted RBP11.8□□□□□ -0.52
HSPG2-202ENST00000374676 SPHK2Q9NRA0 654 aa11.8□□□□□ -0.52
HSPG2-202ENST00000374676 ARHGEF38Q9NXL2 777 aa11.8□□□□□ -0.52
HSPG2-202ENST00000374676 MARK1Q9P0L2 795 aa11.8□□□□□ -0.52
HSPG2-202ENST00000374676 COX16Q9P0S2 106 aa11.8□□□□□ -0.52
HSPG2-202ENST00000374676 LCMT1Q9UIC8 334 aa11.8□□□□□ -0.52
HSPG2-202ENST00000374676 ZDBF2Q9HCK1 2354 aa11.8□□□□□ -0.52
HSPG2-202ENST00000374676 OTOL1A6NHN0 477 aaPredicted RBP11.79□□□□□ -0.52
HSPG2-202ENST00000374676 PI4K2BG5E9Z4 385 aa11.79□□□□□ -0.52
HSPG2-202ENST00000374676 MYO1FO00160 1098 aa11.79□□□□□ -0.52
HSPG2-202ENST00000374676 SCAMP3O14828 347 aaKnown RBP11.79□□□□□ -0.52
HSPG2-202ENST00000374676 ARHGAP6O43182 974 aa11.79□□□□□ -0.52
HSPG2-202ENST00000374676 MTA2O94776 668 aa11.79□□□□□ -0.52
HSPG2-202ENST00000374676 ADH1CP00326 375 aa11.79□□□□□ -0.52
HSPG2-202ENST00000374676 CYP17A1P05093 508 aa11.79□□□□□ -0.52
HSPG2-202ENST00000374676 PSMA2P25787 234 aa11.79□□□□□ -0.52
HSPG2-202ENST00000374676 HDAC4P56524 1084 aa11.79□□□□□ -0.52
HSPG2-202ENST00000374676 KRT83P78385 493 aa11.79□□□□□ -0.52
HSPG2-202ENST00000374676 AMPD2Q01433 879 aa11.79□□□□□ -0.52
HSPG2-202ENST00000374676 PRKCQQ04759 706 aa11.79□□□□□ -0.52
HSPG2-202ENST00000374676 SIGLEC14Q08ET2 396 aa11.79□□□□□ -0.52
HSPG2-202ENST00000374676 CDO1Q16878 200 aa11.79□□□□□ -0.52
HSPG2-202ENST00000374676 FAM133BQ5BKY9 247 aaKnown RBP11.79□□□□□ -0.52
HSPG2-202ENST00000374676 LY6G5CQ5SRR4 150 aa11.79□□□□□ -0.52
HSPG2-202ENST00000374676 ACBD5Q5T8D3 534 aaPredicted RBP11.79□□□□□ -0.52
HSPG2-202ENST00000374676 SH3PXD2AQ5TCZ1 1133 aa11.79□□□□□ -0.52
HSPG2-202ENST00000374676 RHOT2Q8IXI1 618 aa11.79□□□□□ -0.52
HSPG2-202ENST00000374676 ZNF564Q8TBZ8 553 aaPredicted RBP11.79□□□□□ -0.52
HSPG2-202ENST00000374676 MSANTD3Q96H12 275 aa11.79□□□□□ -0.52
HSPG2-202ENST00000374676 C1orf74Q96LT6 269 aa11.79□□□□□ -0.52
HSPG2-202ENST00000374676 DDX50Q9BQ39 737 aaKnown RBP11.79□□□□□ -0.52
HSPG2-202ENST00000374676 TRIM7Q9C029 511 aa11.79□□□□□ -0.52
HSPG2-202ENST00000374676 GTSE1Q9NYZ3 720 aa11.79□□□□□ -0.52
HSPG2-202ENST00000374676 CTTNBP2NLQ9P2B4 639 aa11.79□□□□□ -0.52
HSPG2-202ENST00000374676 IP6K2Q9UHH9 426 aa11.79□□□□□ -0.52
HSPG2-202ENST00000374676 REXO2Q9Y3B8 237 aaKnown RBP11.79□□□□□ -0.52
HSPG2-202ENST00000374676 DOCK4Q8N1I0 1966 aa11.79□□□□□ -0.52
HSPG2-202ENST00000374676 MYO18AQ92614 2054 aaKnown RBP11.79□□□□□ -0.52
HSPG2-202ENST00000374676 MIA3Q5JRA6 1907 aa11.78□□□□□ -0.52
HSPG2-202ENST00000374676 TNFRSF10AO00220 468 aa11.78□□□□□ -0.52
HSPG2-202ENST00000374676 MAN2B1O00754 1011 aa11.78□□□□□ -0.52
HSPG2-202ENST00000374676 PJA2O43164 708 aa11.78□□□□□ -0.52
HSPG2-202ENST00000374676 NRDCO43847 1150 aa11.78□□□□□ -0.52
HSPG2-202ENST00000374676 RNF8O76064 485 aa11.78□□□□□ -0.52
HSPG2-202ENST00000374676 MOCS2O96007 188 aaPredicted RBP11.78□□□□□ -0.52
HSPG2-202ENST00000374676 GJA4P35212 333 aa11.78□□□□□ -0.52
HSPG2-202ENST00000374676 ADRA1BP35368 520 aa11.78□□□□□ -0.52
HSPG2-202ENST00000374676 PCK1P35558 622 aa11.78□□□□□ -0.52
HSPG2-202ENST00000374676 ATXN1P54253 815 aaKnown RBP11.78□□□□□ -0.52
HSPG2-202ENST00000374676 AIF1P55008 147 aa11.78□□□□□ -0.52
HSPG2-202ENST00000374676 GAD2Q05329 585 aa11.78□□□□□ -0.52
HSPG2-202ENST00000374676 ZNF252P-AS1Q0IIN9 211 aa11.78□□□□□ -0.52
HSPG2-202ENST00000374676 PIGHQ14442 188 aaPredicted RBP11.78□□□□□ -0.52
HSPG2-202ENST00000374676 MLF2Q15773 248 aaPredicted RBP11.78□□□□□ -0.52
HSPG2-202ENST00000374676 ARL13BQ3SXY8 428 aa11.78□□□□□ -0.52
HSPG2-202ENST00000374676 RAB6CQ53S08 254 aa11.78□□□□□ -0.52
HSPG2-202ENST00000374676 IER5LQ5T953 404 aa11.78□□□□□ -0.52
HSPG2-202ENST00000374676 NADSYN1Q6IA69 706 aa11.78□□□□□ -0.52
HSPG2-202ENST00000374676 C1orf228Q6PIY5 440 aa11.78□□□□□ -0.52
HSPG2-202ENST00000374676 RALGPS2Q86X27 583 aaPredicted RBP11.78□□□□□ -0.52
HSPG2-202ENST00000374676 FAM131BQ86XD5 332 aa11.78□□□□□ -0.52
HSPG2-202ENST00000374676 TMEM25Q86YD3 366 aa11.78□□□□□ -0.52
HSPG2-202ENST00000374676 NIPA2Q8N8Q9 360 aa11.78□□□□□ -0.52
HSPG2-202ENST00000374676 SLC35G2Q8TBE7 412 aa11.78□□□□□ -0.52
HSPG2-202ENST00000374676 RFFLQ8WZ73 363 aa11.78□□□□□ -0.52
HSPG2-202ENST00000374676 NTAN1Q96AB6 310 aa11.78□□□□□ -0.52
HSPG2-202ENST00000374676 SHDQ96IW2 340 aa11.78□□□□□ -0.52
HSPG2-202ENST00000374676 HAPLN3Q96S86 360 aa11.78□□□□□ -0.52
HSPG2-202ENST00000374676 PRMT1Q99873 361 aaKnown RBP11.78□□□□□ -0.52
HSPG2-202ENST00000374676 TKTL2Q9H0I9 626 aa11.78□□□□□ -0.52
HSPG2-202ENST00000374676 RAB6CQ9H0N0 254 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms